Basic Information

Gene Symbol
grh
Assembly
GCA_004193835.1
Location
NW:1549760-1647650[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.4e-62 5.5e-58 195.6 0.5 28 221 498 686 483 688 0.94

Sequence Information

Coding Sequence
ATGTcgtcgccgccgccggcgcccgCGGCCGACGAGCGCCGCAGCCCGCGCTCGCCCGCGTCCGCGCCGCgctcgcccgcgcccgcgcacgccgTGCTCGCCACCATGACGCCCGTGCAGCCCGCGCACGACTACTACCCGCCCCACAAGGTCGAGATCGACTCCGACGACGGGTACCCCCCCGAGGCCCACTCCTACCGACACTCGCCCCACGAACTCGCCGCCTACGCCCCCGACAACAAAGTCCCCGTCCAGCCGGACGTCTACGACCAGGGCATGGAGTCCATAGACGAGAAGACGCCCATCGATCTCATTTACGAAGACGACAAGCAGACCGTGATCTACACCACGACGCCGGACCAGAAGCGCGTCGAGATGATAAGCGGCCAGCTGGACGACGGCCAGCTCGTGAGCGGCGGCGGGCAGCTGGTGGACGGCGGCGTGTCCGTGGTGGTGGGGCCGCCCGGGCAGGGCCAGACGGTGCTGGTCATCGCCGACCACGTGGTGGACGAGCTCGGGCAGGTCATCGCGATACCCAGAAGACGCAAGGAGGTGATGGAAGTCGGCGGGGAGCAGTGGCGGGCGTACTACAGCGGGGCGGAGCACCCGCTCAGCGCGGCCACGTCGGCGGTGCTGGACGTGTCCGACGAGCCGGGGCAGCCGCTCGAGTACTACCGCCTGCCGCCGATCGCGCAGGACTCGCACCTCAATCTGCACAAGGATGCCAAGCTGGTGGATGTGTGGCAGGCCGGCGGAACGCTGAAGGCGGCCAATGGCGCGCACGGGGCGGAGCTGAGCGAGCTGTCGGGGCTGCTGCACGCGGGGCTCGTGAAGCGCGAGCCCGAGGACCTCAGCCGCAAGGTGGCCGAGGAGCCCGAGCCGCACGCGCTCAAGCCGCAGCGACACAAGGTGGCGGTCGGCGAGCCCGGCGAAGCGGCCTCCCCGTCGCCGGTCCCGTCGCGGGCCTCCTCGGCCGGCTCGCTGCTGCCGGACGCCACCATGTATGCCGCCCAGATGTTCGCGCCGCCAGGCACCCCCAGCCCCACCCCCTATGGCGAACAGTACCCTCGCCAACCTGCCACCTTCGCCGGCGAATCTTACTACAGAGACTACTTTGTCAGTGATGGCTACCAGCAGAGGGCAGCACCGCCATATGGGGAAGCGGAGTCAGTGCCAGCTTCCGCGTTTGGGGAGCGATACGCAGCGCCTCGCTATCATAGTAAAAGTGTTATCGCGGCCGCTGGCTTGACTGTGGACCTGCCATCACCGGACAGCGGAATTGGCGCAGACGCCGTCACTCCTCGAGACCACACCGCCGTTCAGCAGTCGTTCGACTACACGGTAATATGCCAGCAGCCCGTGGGAGAGGACGGGCGGGGCACGCCCTCGGCGCACCACTCGCCCGCCCAGCCGCCCAGGACCAGGCCCTGGCACGACTTCGGCAGGCAGAACGACGCTGACAAGATACAGATTGCTAAACTGTTTTCCTCGTACGGGTTCAAGTACCACCTGGAGACGGCTAGCAGCAGCTCGCAGCGCCGGGAGGACGACCGCATCACGTACATCAACAAAGGCCAGTTCTACGGCATCACCTTGGAATACATACACGACCCGGACAAACCCCTCAAGAATCAAACAGTAAAGAGTGTTGTTATGCTTATGTTCCGAGAAGAAAAATCTCCTGAGGATGAAATCAAAGCGTGGCAATTTTGGCATGGCAGACAACATTCAGTCAAACAGAGGATACTAGATGCCGACACGAAGAACAGCATCGGGCTGGCCGGCTGCATCGAGGAGGTGGCGCACAACGCCATCGCCGTCTACTGGAACCCGCTCGAGAGCGCAGCCAAGatcaaTATCGCCGTGCAATGCCTGAGTACGGATTTCAGCAGCCAAAAGGGTGTAAAGGGTTTACCGCTGCATATACAAATTGACACCTTTGAGGATCCACGAGACACTCAAGTCTACCACCGAGGATACTGTCAAATCAAAGTGTTTTGTGATAAGGGTGCCGAAAGAAAGACCAGAGACGAAGAGAGAAGAGCAGCGAAGCGAAAAATGTCAGCCACGAATAGAAAGAAGTTGGATGAGATATATCATCCAGTGACAGAGAGAAGCGAGTTCTACTCAATGGCGGACTTGTCGAAACCTCCAGTACTGTTCAGTCCAGCGGAAGACATAGACAAGTTAGCCGGGATGGACATACAAGGTTTCTACGGGCACGACGAGGCCGCATTAGCTGAAGCACACCTGAAAGGCGCCTCACCCTTCTTACTACACGCAGCGAAACCGCAAGCACCAGCGTTAAAATTCCACAACCACTTCCCACCTGACGCGCCAGCGTACCGTCCAGACGTGGGCGGTTTGTCCCCTTACAGCGACCGCAAGGACTCGCTGGAGCTGGAGGGCGTGCTCGGCAAGCGCGCGCGCACGAGCACGCCGCCGCTGAGCGAGCGCGTCATGCTGTACGTGCGCCAGGATACTGACGAGGTGTACACGCCGCTGCACGTCGCGCCGCCCACCACGCAGGGCCTGCTGCACGCTATTGAGAATAAGTACAAAATTTCAAGTTCGGCAATTAATAATCTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGATGATGAAATGTTGGCGTACTACTGCAACGAGGATCTTTTCCTACTTGAGGTGCGACCGGCGGGCGTAAACGAGGACGAACCGCTCTACGACATCACGTTCGTGGAGCTGTCGGTGGACCACTAG
Protein Sequence
MSSPPPAPAADERRSPRSPASAPRSPAPAHAVLATMTPVQPAHDYYPPHKVEIDSDDGYPPEAHSYRHSPHELAAYAPDNKVPVQPDVYDQGMESIDEKTPIDLIYEDDKQTVIYTTTPDQKRVEMISGQLDDGQLVSGGGQLVDGGVSVVVGPPGQGQTVLVIADHVVDELGQVIAIPRRRKEVMEVGGEQWRAYYSGAEHPLSAATSAVLDVSDEPGQPLEYYRLPPIAQDSHLNLHKDAKLVDVWQAGGTLKAANGAHGAELSELSGLLHAGLVKREPEDLSRKVAEEPEPHALKPQRHKVAVGEPGEAASPSPVPSRASSAGSLLPDATMYAAQMFAPPGTPSPTPYGEQYPRQPATFAGESYYRDYFVSDGYQQRAAPPYGEAESVPASAFGERYAAPRYHSKSVIAAAGLTVDLPSPDSGIGADAVTPRDHTAVQQSFDYTVICQQPVGEDGRGTPSAHHSPAQPPRTRPWHDFGRQNDADKIQIAKLFSSYGFKYHLETASSSSQRREDDRITYINKGQFYGITLEYIHDPDKPLKNQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSIGLAGCIEEVAHNAIAVYWNPLESAAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSATNRKKLDEIYHPVTERSEFYSMADLSKPPVLFSPAEDIDKLAGMDIQGFYGHDEAALAEAHLKGASPFLLHAAKPQAPALKFHNHFPPDAPAYRPDVGGLSPYSDRKDSLELEGVLGKRARTSTPPLSERVMLYVRQDTDEVYTPLHVAPPTTQGLLHAIENKYKISSSAINNLYRKNKKGITAKIDDEMLAYYCNEDLFLLEVRPAGVNEDEPLYDITFVELSVDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00779285;
90% Identity
iTF_00780033;
80% Identity
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