Basic Information

Gene Symbol
Ubp1
Assembly
GCA_004193835.1
Location
NW:359895-392008[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-68 3.7e-64 215.8 0.1 19 221 122 317 114 319 0.92

Sequence Information

Coding Sequence
atgttgctgtcgcgctcgcacactcactgcgggcgcccgtcgcacagtcgcgctGTGCTGTCGCCCCAGCGGCGCCAATGGCCGCCCCGGCGCCCCGACGAACGACAGATGACCGGCATGGTGGTGGACGGATCCAACCGCGAGGGCATGGACGACGGCTGCCAGCAGTCTCCACCACATAACGTGATGATGCAACAGCACGGCAGCCCCGAAAGCATGCAATGCCAGCCCACAATGCAGGGCGGTATGATGCCCATGAATGGCTACCACTCGCCCACCGGACAGGAGAATAAAAACGCAGGGTTGCTGATCTGCTCGCCAGTGAGCTCGCTGGAAGGCTTCCTCCACTCGCCTGTGCAGCAGCGATCCGAGCCCAGCTTCAAGGATGACACCagGTTCCAATACGTGCTAGCAGCAGCAACCTCAATAGCCACCAAGCAGAACGAAGAAACCCTAACGTACTTGAACCAAGGCCAGCCCTACGAGATCAAGCTGAAGAAACTGGGAGACCTCTCGCACTACAAGGGGAAGATTCTCAAGagtGTAATCAAGATTTGTTTCCACGAGCGTCGGCTGCAGTACATGGAAAGGGAACAAATCGCTCAGTGGCACGCCGAGCGACCGGGAGACAGGATCATTGAGGTGGACGTGCCTCTGTCCTACGGCGTCACTCGGGTCGAGCAACCGGCGGCGCTCAACGCTCTCCACGTGTATTGGGACCCTACCAAAGACGTCGGCGTCTACATCAAGGTGAACTGCATATCCACGGAGTTCACGGCCAAGAAACATGGCGGCGAGAAGGGCGTGCCCTTCCGCATCCAAGTCGAGACCTACCTCGCGACGGAAGAACATAATAGGCTGCACGCAGCCGCCTGCCAGATCAagGTCTTCAAGTTAAAAGGCGCTGATAGAAAACACAAGCAAGATCGAGAAAAGGTGATGAGGCGACCACGCCCCGACTTGGACAAGTACCAGCCTGGATGCGAAGCCACCGTGCTCACCACcTTGTCGAACGACGCGCTAATGCCACCGCCTTCCCTGGTGACGACATCGCCGCCGTACTCGCCAGAACTAAGTGTGACCCCAAAGACAGTTGCAAGTCCGATTTTGGTCAACAAACCTGTTCTCCCTCAACCAGCTATACTTTCATCAGCTAACCAGATGAAGCCCCTGTACTGTCAAGATGGCGGTGAGATGAAAGTGAGCTCGCCGCCATGCCACTCGCCCGGCGCCATCTTGCCAGATCTGCCGCAACCGGCCGAAGATCCGGATAAGAACTACGGGCTGTCAAAGGACGCAACAGCGGCCGAGACACAGGCGTGGTTGTCGCGGCAACGCTTCGCGCAGCACGCGGCGACGTTCACCAACTTCTCTGGGGCTGACTTGCTCAGACTGTCTCGTGATGACATCATTCAGATCTGCGGGCTAGCCGATGGGATACGTTTATACAACGCCCTGCACGCCAAGCGCATCGAGCCTCGTCTGACAGTTTACGTGTGTCCGCCCGGCGCCGCCGTGTACAGCGCGTTATATCTACACGCCTGCCGCGCGCCAGAGCTTATGCGCCGTCTACACGCGTTGTTACACGAGGTAAGCTCTTAA
Protein Sequence
MLLSRSHTHCGRPSHSRAVLSPQRRQWPPRRPDERQMTGMVVDGSNREGMDDGCQQSPPHNVMMQQHGSPESMQCQPTMQGGMMPMNGYHSPTGQENKNAGLLICSPVSSLEGFLHSPVQQRSEPSFKDDTRFQYVLAAATSIATKQNEETLTYLNQGQPYEIKLKKLGDLSHYKGKILKSVIKICFHERRLQYMEREQIAQWHAERPGDRIIEVDVPLSYGVTRVEQPAALNALHVYWDPTKDVGVYIKVNCISTEFTAKKHGGEKGVPFRIQVETYLATEEHNRLHAAACQIKVFKLKGADRKHKQDREKVMRRPRPDLDKYQPGCEATVLTTLSNDALMPPPSLVTTSPPYSPELSVTPKTVASPILVNKPVLPQPAILSSANQMKPLYCQDGGEMKVSSPPCHSPGAILPDLPQPAEDPDKNYGLSKDATAAETQAWLSRQRFAQHAATFTNFSGADLLRLSRDDIIQICGLADGIRLYNALHAKRIEPRLTVYVCPPGAAVYSALYLHACRAPELMRRLHALLHEVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01361341;
90% Identity
-
80% Identity
-