Basic Information

Gene Symbol
pnr
Assembly
GCA_031763485.1
Location
JARFOC010000428.1:153492-173599[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-17 6.3e-13 50.4 2.0 1 35 321 354 321 355 0.97
2 2 1.6e-18 2.4e-14 54.9 6.9 1 34 377 409 377 411 0.97

Sequence Information

Coding Sequence
ATGGAACCTTATCTGAACATCGCTATTGTGGCACGCGCGACGGATTTCTTGACTAATAAAATGGAACAGAAAGACAACAACGGCTCTCCTGTTATAGAAGAAATCAAGCAAGAGGATAGCGGCGCCGTAGAGAATTCGCAGGAGAACCAGAATCCCGCGGTGAGCGTCATTCGACCGAGGCAAGTGATCACTACGGCCGGTATTATTGTGTCGGAGGGACAGAAAATCGAAGTCGTTTCCGAGGAGGTTGTGAAGAGTTCGACGCCGGTCAGTGGCAGTCCAGACGACAATGTAAACGCTGCCAAACAGGGCGAGCTACACTATGAAGAACAGATCCAACGCGGGGAAGACGGACAGACGTACGAATATGTAGAGGAAGACGTGACAGGCCAAGTCTACCAAAACCAAGAGGGTCAGATGATCTTCACGACGGCAGTCGACCTGAACCAAGTATCCCACATTCAACTGAACGCCTCACAATTCGAAGGGCAAGAAGACGTTAAGAGTGCCGAATATACCAATCTGGAAAGCGTCCCTTCTTCGCAGTTTAGCCACCAGATTCCAGCCGATGCTACGCAGTATTTGCAACAAACTCAGTATCAGCAACAATACTCGACTTACCCTAAAGGAGCCAGAAGCTTAGAAGAAAGTCCACCGAGTGAAGTTTTGTATAGCGATCCTACTTTAAGTTCGACCAGGATGTTCCAGAATGTTACgGGCAATTACGATTTATCCGCTTCCCAATCTCCTAACAATCAAGTGGCTTTAGTTACCGAAGGTGGCTTCTTCATTCCTACGAATCCAGCCCAATGGTCACAGGCAAGCACCAGTTGCCAGTATTTTCCGCCTGCAAACGCAGTCAACGTCCAGGATAGTACCATCTCTTTTCAATATACCGGACCATGGCAGGACGATAACTACGAATCAGCGATTCCAGCAGAGGTAGATATGATCAAAGAATGCGTTAATTGTGCAGCTAGCGTCACTCCCTTGTGGAGGCGAGACGGCACCGGTCATTACTTGTGTAATGCTTGTggtttatacaataaaattaatggcgTTAATAGACCACCAATTCGAACCAACAAGAAACCACCAACAACTGGGAATCGACGTAGCGGTATACAATGCGCTAATTGTGGCACGACAACCACCACTTTATGGCGACGGAATAACCAAGGCGAACCTGTATGCAATGCCTGCGGCCTGTACTTCAAATTGCATAATATGAATCGTCCTCTTAGTATGAAAAAGGATGGGATTCAGACCAGGAAACGTAAACCAAAAGGCAAACCGTATTCTGGAGTGGCCAACGGGCATGTGAATATTCCTCAGCGTAATTCTGGGAtgtatatgcCACATGCAAACGACTTAAATGAACAGTACCAGCTCCCTTACATCGTTAACCAACCTGCACAGCTAAGACTGCCCAGCGCTTCTATTATAGGTCGTCAACCGATTAATAAcgTTGCGTTAGATTCTGTCATAACTCGAAATGTGGATGAACACGTAAACGAAGCAAGTGTTATCACGTCGACTTCTGCAGCCAACAGACACGGATTCCCCTCGAATGGTGACAAGAATCCCGGACACGACCAGGGGGATTGCTAA
Protein Sequence
MEPYLNIAIVARATDFLTNKMEQKDNNGSPVIEEIKQEDSGAVENSQENQNPAVSVIRPRQVITTAGIIVSEGQKIEVVSEEVVKSSTPVSGSPDDNVNAAKQGELHYEEQIQRGEDGQTYEYVEEDVTGQVYQNQEGQMIFTTAVDLNQVSHIQLNASQFEGQEDVKSAEYTNLESVPSSQFSHQIPADATQYLQQTQYQQQYSTYPKGARSLEESPPSEVLYSDPTLSSTRMFQNVTGNYDLSASQSPNNQVALVTEGGFFIPTNPAQWSQASTSCQYFPPANAVNVQDSTISFQYTGPWQDDNYESAIPAEVDMIKECVNCAASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPIRTNKKPPTTGNRRSGIQCANCGTTTTTLWRRNNQGEPVCNACGLYFKLHNMNRPLSMKKDGIQTRKRKPKGKPYSGVANGHVNIPQRNSGMYMPHANDLNEQYQLPYIVNQPAQLRLPSASIIGRQPINNVALDSVITRNVDEHVNEASVITSTSAANRHGFPSNGDKNPGHDQGDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00308511;
90% Identity
-
80% Identity
-