Basic Information

Gene Symbol
gata5-a
Assembly
GCA_031763485.1
Location
JARFOC010000428.1:197265-204027[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-18 2.7e-14 54.7 2.7 1 34 31 63 31 65 0.97
2 2 4.4e-19 6.7e-15 56.7 5.3 1 35 85 118 85 119 0.97

Sequence Information

Coding Sequence
ATGCCGAGGGCATCTAGTCTTAGACGGTCCGATGCGATTCAAAAAATTATCGATCCAAGAACAGCGGAATACTTCACCGAGGGGCGTGAATGTGTTAACTGCGGTGCAATAGATACACCTCTTTGGCGTCGGGATGGCACTGGCCACTACCTCTGCAACGCATGTGGCCTCTACCACAAGATGAACGGCATGAACCGCCCTCTAGTTAAGCAGCCTCGTAGATTGtcCGCATCTAGACGAGTTGGATTGACTTGTACCAACTGCCACACCAGCACCACATCACTTTGGCGAAGGAATGCCATGGGAGAATCCGTTTGCAATGCTTGCGGACTCTACTACAAGTTGCACGGCGTTAATAGACCTATGGCAATGAAGAAGGAAAGCATACAAACTAGAAAACGTAAACCGAAGGGTAGCAAAGACACAAGTTCCAATAGTAACGGTATTCCCACTAGTATATCAAATTCAACATCGAATATTAAGCTGGAACACAacattaatacaataaaattggaACATTCTCCGATTGACACATACAACGAGTTAAGGAACGTAGCATCCATCGGACAACTGTCCCACCCTTCGGCGCCCTCACCTTACATGTACACCAACACTTCCACCCACCAACGCACCATGTCACCTTACGGTTCATCTCAGTCGTCGCCGCAACTCGAATATTACAGCAACATCATCCACCAGGCCAGTCCGAGTCCACCATCGGCGCAATCGCCTAGTCCAAATTCGTCACACATagtgcataataataataacaacatgAAAGTAATCATTAACGGCGACCTATCGGCAGATAGACCGACTGTAGTGTCGTTATCGTCCTAA
Protein Sequence
MPRASSLRRSDAIQKIIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNAMGESVCNACGLYYKLHGVNRPMAMKKESIQTRKRKPKGSKDTSSNSNGIPTSISNSTSNIKLEHNINTIKLEHSPIDTYNELRNVASIGQLSHPSAPSPYMYTNTSTHQRTMSPYGSSQSSPQLEYYSNIIHQASPSPPSAQSPSPNSSHIVHNNNNNMKVIINGDLSADRPTVVSLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-