Basic Information

Insect: Osmoderma eremita
Gene Symbol: -
Assembly: GCA_031763485.1
Location: JARFOC010000539.1:115514-120125[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.014 3.6 10.5 0.5 1 23 294 316 294 316 0.92

2 12 1.3 3.3e+02 4.3 0.0 1 22 321 344 321 347 0.91

3 12 0.11 28 7.7 2.7 3 23 414 435 412 435 0.92

4 12 0.0064 1.6 11.6 4.6 1 23 441 463 441 463 0.97

5 12 2.8e-05 0.0071 19.0 0.4 1 23 469 492 469 492 0.92

6 12 6.4e-05 0.016 17.9 4.5 1 23 498 520 498 520 0.98

7 12 0.00066 0.17 14.7 2.0 1 20 526 545 526 548 0.91

8 12 3.5e-06 0.00088 21.8 1.8 1 23 554 576 554 576 0.97

9 12 3.3e-06 0.00084 21.9 0.3 1 23 582 604 582 604 0.98

10 12 0.0019 0.47 13.2 6.5 1 23 610 632 610 632 0.98

11 12 0.0017 0.44 13.3 0.7 1 23 666 688 666 688 0.98

12 12 2.6e-07 6.6e-05 25.4 1.8 1 23 694 716 694 716 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.014	3.6	10.5	0.5	1	23	294	316	294	316	0.92
2	12	1.3	3.3e+02	4.3	0.0	1	22	321	344	321	347	0.91
3	12	0.11	28	7.7	2.7	3	23	414	435	412	435	0.92
4	12	0.0064	1.6	11.6	4.6	1	23	441	463	441	463	0.97
5	12	2.8e-05	0.0071	19.0	0.4	1	23	469	492	469	492	0.92
6	12	6.4e-05	0.016	17.9	4.5	1	23	498	520	498	520	0.98
7	12	0.00066	0.17	14.7	2.0	1	20	526	545	526	548	0.91
8	12	3.5e-06	0.00088	21.8	1.8	1	23	554	576	554	576	0.97
9	12	3.3e-06	0.00084	21.9	0.3	1	23	582	604	582	604	0.98
10	12	0.0019	0.47	13.2	6.5	1	23	610	632	610	632	0.98
11	12	0.0017	0.44	13.3	0.7	1	23	666	688	666	688	0.98
12	12	2.6e-07	6.6e-05	25.4	1.8	1	23	694	716	694	716	0.98

Sequence Information

Coding Sequence: ATGGAGGATGGTACTCTGTTATGCGATACTTTCCTCTGTCGTCTTTGCGGCGAAGAGAACAAGAACGGAACCAATTTGTACGTATTCGAAGAAAACAAACAGGATTTAAGCCAGCTAGTAAACAAGTATTTACCGCTAAAGGTCGATAATGACGGGAAATACCCGCTCACTATATGCCCTGGATGCAACATACAGTTGGAGGCGACGAAATTCTTTTTCGATCTAATTATAGAAGGTCAAACCAAGCTTAGGGAATTGTTGAATAAACAACAGGAAACGCTGAAGAGGCAGGAGAAGCAGAGGCAGCAACTGGAGGATGTATTGAAAAACGTCAATCCAACATCCAGTGTTGAAACTTATACCATACAATCAGATGAGACCGGGGAGAAATTCATCATTCAAATTTTATCTGATGGTCCACTTTTTCCACCTGATCATGAATTATCATTACGTGTAGAGGGTTTGGAAAAACCGAAAAGGAAAAGAGGTAGACCACCAAAACAATCGAATGGAACCACTGAAGAAACGAGAGAGGTACAACAAGAGAAAGAAGTCGGTGAACCTGacgcagaagaagaagaatttgaTGGCGATGGTCGTAGAAAAAGGAGAATCAAGGTGCCTTCCAGATACCAAGAGGTATTACAGGGAAAAGAAATGGATAGAATCTTTAAGGAAGAAGGCGTCATTGATGAGGACTCTTTGTCGGAAGAGGAAACCAAAATCACTCCCCCAGATACTAAACCCGATAATGAAATTATTGGACACATGCAAGATAAAGACGGAGAGGATCTCGGTGAATTAGTAGTTGTGAATAAGGGgatgaataaaattaaagtgAAATCAAAAAATGGGACAACTGCGAAGAAGAAACGGAAATTTGAATGTGAAATTTGCGGTAGGGTCTTCTTGCATGCAGGTCGTTTGGAGGTACACAAATCTTTCCATAAGAATATTAAATACCGGTGTAATGTGCAAGATTGTTGGGTGGAAAtggaaacaaaagaaatgttgGAAGCGCATCAGAAAGAAATGGGACACGTTGGAACAACACTGATAGAAAGTTTTGATTATGGTCAAATTCAACTGACACAAGACGACCCATTATTAGTAGCAGGCGATAAAAAAACCCCAGAAGATGATAGTACACCTACTACCTTAGCTACTACTAGTGAAGGAGCTGTCCCGGAGGAAGACAAAACAGAATGTGAAGAACCGAAAATCACCTTCAAAATAATCTGCCAACTCTGCCACAAGACATTTTCCTGTCGGCAAAACTATGAAATCCACGTAAAGGCAGTGCACGACCATCAGAAACCGTACAAATGTGATAAGTGTGAGAAGACCTTCTCTTACGTAAATAGTTTGAAGTGTCACATGCTCCAACATGCCAATGATAAAACTTACCCGTGTGAGAACTGTGATAAAGTCTTTAACCATCCGAGCAGTTTGGTGTACCATCGCGAAGCCGAACATAACAATGGTCGGAAGTTTGTGTGCATGAAGTGCAAGAAGACTTTCAAGCATAAACAGTTATTGCTGAGGCATCAGTTAGTGCATTCGAATGATAGGCCGCACAGTTGCAAGTTCTGCCAAGCCACTTTTAAGACTAGAGCTAACCTATTGAATCACATGCCTATGCATACCGGCGAGAAGAagttcttttgtaatatttgcgGGCAAACTTTCGCGCACAAGACGTCGTTGACCCTTCACATTCGGTGGCATAACGGTCAGAAGCCGTATGAGTGTGAGGTGTGTTTGAAAACTTTTTCTCAAAAGGGGAATTTAGCCGAACACAAGAGGATTCATACTGGTGAAAAGCCATACAGCTGTGATCATTGTGGTAGGCGCTTTACAACGTCCTCTCAGCATAAGCTCCATGTAAAAAGACATACCGGTGTTAAACCGTGGCAGTGTGAATACTGCGCTAAACAATTTTTGCACAAAGACACTTGGAAGTGTCATACGAGGAGACATCGGAATGAAAAACCGTTTCAGTGTCAACAGTGCATGAGAGCTTTTACGGAGCAATGGGCATTGAAAAAGCACGAACGCTTACATACAGGTGAGAAACCATACACTTGCCAGTTGTGCAATAAATCTTTTGCGGATTCCTCGAATCTAACCAAACACAAAAAGATTCACACGAAAATGCTACAGAAGGAAAGGGTTATTAAGGTTATAACATCAGATACAGataataaaatcttatatcTGGCCTACGAAGATGGGAATTCAAATGGGGAGGAACCTCAGACCTTCGTGCATATAATGGACGATGATCTCGATCAGCCAGCCGTGCCTTCAGAAACTAAGCAATCTGACGGAGCAGATTCTGCTACCTTATCCACGAGTCCCCTGACCGATTGCAAAGAAGGACTGACTGTAACGCCATCGCTTCACTTGCAGAATTTGCAGCAGGTTATCGATTATGATGGAAACCCGTTGAGTATAACAACTGCcgataatcaaaatatcaaagtTGTTATGAGCGTAGACGACGGTCAACAAAGTATACAAGGATTATTACCCGATGGTACTTTGGTTCCGATGAATTTGGTAATACAGGAAGGTAAGGGTGTAACGGCTGAAATATTAGCACCGCAAGCGAAACCTGACAAGCCCGACGAAAATGACGCTTTGAATACCGCAACAAGCAGGGAGAATTCGAATTCATCCAGTGTAGACCAACTTTTAGATAACAATATTGAGTTATTGGCGGAAGAGAATCAAAAATTAGAGAGcaacatacaatttttaacggaagaTGGTCAAAATGTATGTTTCGTGGCAGCGTACAATATCGAAGATACAATAAATCCTCAGTACCTGACAATGTCGTAA
Protein Sequence: MEDGTLLCDTFLCRLCGEENKNGTNLYVFEENKQDLSQLVNKYLPLKVDNDGKYPLTICPGCNIQLEATKFFFDLIIEGQTKLRELLNKQQETLKRQEKQRQQLEDVLKNVNPTSSVETYTIQSDETGEKFIIQILSDGPLFPPDHELSLRVEGLEKPKRKRGRPPKQSNGTTEETREVQQEKEVGEPDAEEEEFDGDGRRKRRIKVPSRYQEVLQGKEMDRIFKEEGVIDEDSLSEEETKITPPDTKPDNEIIGHMQDKDGEDLGELVVVNKGMNKIKVKSKNGTTAKKKRKFECEICGRVFLHAGRLEVHKSFHKNIKYRCNVQDCWVEMETKEMLEAHQKEMGHVGTTLIESFDYGQIQLTQDDPLLVAGDKKTPEDDSTPTTLATTSEGAVPEEDKTECEEPKITFKIICQLCHKTFSCRQNYEIHVKAVHDHQKPYKCDKCEKTFSYVNSLKCHMLQHANDKTYPCENCDKVFNHPSSLVYHREAEHNNGRKFVCMKCKKTFKHKQLLLRHQLVHSNDRPHSCKFCQATFKTRANLLNHMPMHTGEKKFFCNICGQTFAHKTSLTLHIRWHNGQKPYECEVCLKTFSQKGNLAEHKRIHTGEKPYSCDHCGRRFTTSSQHKLHVKRHTGVKPWQCEYCAKQFLHKDTWKCHTRRHRNEKPFQCQQCMRAFTEQWALKKHERLHTGEKPYTCQLCNKSFADSSNLTKHKKIHTKMLQKERVIKVITSDTDNKILYLAYEDGNSNGEEPQTFVHIMDDDLDQPAVPSETKQSDGADSATLSTSPLTDCKEGLTVTPSLHLQNLQQVIDYDGNPLSITTADNQNIKVVMSVDDGQQSIQGLLPDGTLVPMNLVIQEGKGVTAEILAPQAKPDKPDENDALNTATSRENSNSSSVDQLLDNNIELLAEENQKLESNIQFLTEDGQNVCFVAAYNIEDTINPQYLTMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00627617; iTF_01121060; iTF_00956521; iTF_01499142; iTF_00434348; iTF_00308308;
90% Identity: -
80% Identity: -