Basic Information

Insect: Osmoderma eremita
Gene Symbol: ham
Assembly: GCA_031763485.1
Location: JARFOC010087120.1:6045-13972[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.025 6.3 9.7 0.8 2 23 22 44 21 44 0.96

2 9 0.00015 0.039 16.7 0.3 1 23 51 74 51 74 0.95

3 9 3.7e-08 9.4e-06 28.0 4.2 1 23 80 102 80 103 0.96

4 9 1.3e-06 0.00033 23.2 1.7 1 23 109 131 109 131 0.95

5 9 3.3e-05 0.0083 18.8 5.0 1 23 137 159 137 159 0.99

6 9 0.0063 1.6 11.6 1.1 2 21 167 186 166 187 0.95

7 9 1.1e-08 2.8e-06 29.7 0.7 1 23 527 549 527 549 0.98

8 9 1.4e-06 0.00036 23.0 1.6 1 23 555 578 555 578 0.97

9 9 1.1e-05 0.0029 20.2 3.4 1 23 584 606 584 606 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.025	6.3	9.7	0.8	2	23	22	44	21	44	0.96
2	9	0.00015	0.039	16.7	0.3	1	23	51	74	51	74	0.95
3	9	3.7e-08	9.4e-06	28.0	4.2	1	23	80	102	80	103	0.96
4	9	1.3e-06	0.00033	23.2	1.7	1	23	109	131	109	131	0.95
5	9	3.3e-05	0.0083	18.8	5.0	1	23	137	159	137	159	0.99
6	9	0.0063	1.6	11.6	1.1	2	21	167	186	166	187	0.95
7	9	1.1e-08	2.8e-06	29.7	0.7	1	23	527	549	527	549	0.98
8	9	1.4e-06	0.00036	23.0	1.6	1	23	555	578	555	578	0.97
9	9	1.1e-05	0.0029	20.2	3.4	1	23	584	606	584	606	0.99

Sequence Information

Coding Sequence: TCCCAACATAGTGGTACCGTAGAAGACGAAAGAGAAGATGCCGAGGAAGATGAGAACGAAACAAAATGCTGCGTTTGCGAACAGCCATTCTCCGATATAGACAAATTAGACGAACACCTCATAACCAAACACAGCTATAGAAGGGACGAATACAGTTGCGACCTTTGCCCAAAAACCTACTCGTACCGACCCAGCCTGATCAAACATAAAGCCATCTTGCACGGAGAGCACAAGAAATACCACTGCGAGAACTGTACCAAGGTCTTTACTGACCCTAGTAACTTACAGAGGCACATCAGGACACACCACGTGGGCGCTAGATCTCACGCTTGCCCAGAATGCGGTAAGACATTCGCCACGTCATCCGGTTTGAAGCAGCACACGCATATACATTCTTCAGTGAAACCTTTCCAGTGCGAAGTTTGTTTTAAGgcGTATACGCAATTTTCTAACCTCTGCAGACATAAGCGCATGCACGCCGATTGCCGCATGCAAATCAAATGCGTCAAATGCTCGCAGTCCTTTTCGACAGTCACTTCGCTTTCTAAGCATAAAAGATTTTGTGATTCCACGACACCGACGCCATCACTAGGCAATCATCAGCAATTACCTTTAAGTCCGATGGGTAGTAACAATCCTTTTAGCCTTTATAGAGCGCCCGCTTGTCCTTTGCCTTTTTTCCCACCGCATTTTCCACCATATCATCAGCTGTTTCCAACAGCAGGTCCTCCAGCGTCCCCTTTCATTAACCCTCTACTCTTTAATCAACTCCCCAAGTTGAAAAGCGAGGATAGCATCGACGTGCCTCAGAAGAAAATGCGGACGATTAGTCCTGAAAGGATATCGCCCTTAAAAGACAGATTTACACCACCGCGATTAACGCAGATAACAGCTAAAGTTAGTCCGCCCACGGCGGAGGAAGCCCATCTCACACCGTCTCCAGCTAGACCTCCAACTAGTGCGGTAGTTTTTAGCAATAATACCGTTGCGAATAGCAGTAACACAATTCGAAATTCCGAAGACGAGGATACTTTCCCAAAAGATTTATCCAGAGGTGGTAAGGAATCGCCTTGTAGAGTTATCGAGGACAATTCGAATAGATCATCAAGTGGAGATGAAGATTTAGAAAAACCTTTGGATCTGAGCCTGGGTAAGAAGAATTTTTTGGTTGCGAGAGAAAGCAAGAGGAAAACACCTGAGAAAATCGAAAAACCTCCAAGCAGTCCGATCAGTAAAGTTGAGGATGAAAAAATTGAAGTTGTAGACATCGAAGACACACCCAGCGAGAAAAATAAGGAAAGATCTTTCGAGAAACCCTCACCAATGGCTTGTCCGCGACCGATACATCCCATACCATTCTTCGATATCTATCGGCCAAACTTCGGATTCCAAAATCAAGCCGGTGATCGCCTTTTGCCCCTACCCTTCGGCCCGAGTAGGTTCTCCTTTCTGAACTCGCTGCAACAGCACAGGAATTACGATTTGCTGAGGCCCGGTTTGCAGAATTTCGGCGGTGTAAAGACCTTTCACGAGGTGGTGCAGGCGCAACATCAAGCCCAAGGTAAAATAAAGGATAGGTACGCGTGCAAGTTCTGCGGTAAGGTGTTTCCCAGGAGTGCCAATTTGACCAGGCACTTACGAACGCACACAGGTGAACAACCGTATAAGTGCCGGTACTGCGAAAGATCGTTTAGCATCTCCAGTAACTTGCAAAGGCACGTGAGGAATATCCATAATAAAGAGAAACCTTTCAAATGCCCCCTGTGTGAAAGGTGCTTCGGCCAACAAACCAATTTAGACAGGCATCTGAAGAAACACGAAGCGGACGACGGTAGTGGCGGTGTAGCAGTGGCCGATTCGCCAGGAAGCAGTAACGAAAACGAAAGGGAAGACGCTTACTTCGATGAGATCAGGACATTTATGGGAAAAGTTACGTACTCTGGCAGTGATCCTTTTAACCAAAGTGGATTGTACACACCACCGAACCCGCATGGCCTTCCCAAAGAAGACGAGGACTCCGAAACTTATTCGGAGGAATCACCGCAGGAGGATTATCCAATGGGGAAGATAAATTTTGGAACGCCCACTATGATTAAGGAGGAAAAAGACGAGGTGTTGAACAACAACGACCAAAGTCTAGAAGTTTCTACCTAG
Protein Sequence: SQHSGTVEDEREDAEEDENETKCCVCEQPFSDIDKLDEHLITKHSYRRDEYSCDLCPKTYSYRPSLIKHKAILHGEHKKYHCENCTKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCSQSFSTVTSLSKHKRFCDSTTPTPSLGNHQQLPLSPMGSNNPFSLYRAPACPLPFFPPHFPPYHQLFPTAGPPASPFINPLLFNQLPKLKSEDSIDVPQKKMRTISPERISPLKDRFTPPRLTQITAKVSPPTAEEAHLTPSPARPPTSAVVFSNNTVANSSNTIRNSEDEDTFPKDLSRGGKESPCRVIEDNSNRSSSGDEDLEKPLDLSLGKKNFLVARESKRKTPEKIEKPPSSPISKVEDEKIEVVDIEDTPSEKNKERSFEKPSPMACPRPIHPIPFFDIYRPNFGFQNQAGDRLLPLPFGPSRFSFLNSLQQHRNYDLLRPGLQNFGGVKTFHEVVQAQHQAQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGGVAVADSPGSSNENEREDAYFDEIRTFMGKVTYSGSDPFNQSGLYTPPNPHGLPKEDEDSETYSEESPQEDYPMGKINFGTPTMIKEEKDEVLNNNDQSLEVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00070633;
90% Identity: iTF_00308276;
80% Identity: -