Basic Information

Insect: Osmoderma eremita
Gene Symbol: -
Assembly: GCA_031763485.1
Location: JARFOC010051169.1:7425-12661[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0061 1.5 11.6 4.2 3 23 194 214 192 214 0.95

2 10 1.2e-05 0.0031 20.1 0.8 1 23 220 242 220 242 0.98

3 10 5.9e-05 0.015 18.0 0.7 1 23 248 270 248 270 0.97

4 10 8.2e-05 0.021 17.5 5.4 1 23 279 301 279 301 0.98

5 10 3e-06 0.00076 22.0 0.4 1 23 324 346 324 346 0.98

6 10 0.00043 0.11 15.2 0.2 1 23 351 373 351 373 0.95

7 10 6.7e-06 0.0017 21.0 0.2 1 23 379 401 379 401 0.98

8 10 8.7e-06 0.0022 20.6 2.4 1 23 407 429 407 429 0.98

9 10 3.4e-06 0.00084 21.9 0.4 1 23 435 457 435 457 0.99

10 10 0.0038 0.95 12.3 2.2 1 23 463 486 463 486 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0061	1.5	11.6	4.2	3	23	194	214	192	214	0.95
2	10	1.2e-05	0.0031	20.1	0.8	1	23	220	242	220	242	0.98
3	10	5.9e-05	0.015	18.0	0.7	1	23	248	270	248	270	0.97
4	10	8.2e-05	0.021	17.5	5.4	1	23	279	301	279	301	0.98
5	10	3e-06	0.00076	22.0	0.4	1	23	324	346	324	346	0.98
6	10	0.00043	0.11	15.2	0.2	1	23	351	373	351	373	0.95
7	10	6.7e-06	0.0017	21.0	0.2	1	23	379	401	379	401	0.98
8	10	8.7e-06	0.0022	20.6	2.4	1	23	407	429	407	429	0.98
9	10	3.4e-06	0.00084	21.9	0.4	1	23	435	457	435	457	0.99
10	10	0.0038	0.95	12.3	2.2	1	23	463	486	463	486	0.92

Sequence Information

Coding Sequence: atgagcGTCAtcgatattaaaaaagtaacattACCATTAGTAAAATCCGAAAGTACTCCAATTAATGTTTATCCGTATAGCGTTACTTTAGAAAACTTCGATCGTGTTTGCCGATTTTGTGTCGGATATCACGACTCAATCGaaccgatttttaaagtatGGTACAAAAATATATCACTGCAGAATATTATAGCCGACTGTACATCTTTGAAGGTAGATGTTGGTGACTTTCTACCTCAAAATATATGTCCTGCATGCCTGGCTGAAGCAATTAGATGCTATAATTTCAGAGAGAAATGTCTACAAATGGAAAGCATTTTAATTGATGTGTACAACAAACTAAATGCTGGTGAAACAATTGCTAATGTAAAAAAAGAGAATAAAGTTTCTGGTGACGAAGGTGTGAAACAGATTGAATTTGTTGCGGTCAACGACAGTGAAAATTTCTCTGATCCCTCGGCACATAAACAGCTGAAAGATAAATTGGTTACAAATCTAGGGGAACAATGTATTACGGAAGGATCTCAAGGACCACTTTTCAAGCGTTCGCCATATTCAGAAAGCTTTAACACTAGCATATGTACTACTATATGTAAGAAAAGGTTTACCAAATGTAAATTAAAGCGACATATACAAGTACATACAAAAGAGAAaccatttatttgcaaaatatgttatCAAGGCTTTCGTGCGAATATCAACTTAAAGAGGCATATGATGACACATACTGGTGAAAGGCCCCATACTTGTGAAGTGTGTGGTAAAGgcTTTATTCAAACAACTGGACTTCGCATACACAAGGAAACGCACAACGTTTTAAAATCATCCAAATGTTTTACGTGCGAAATTTGTGGGCGTGTGTTTAAAAGGCAAGGGTGCTACCACACACACCTATCAAAGCATAAGTCGAAAGCTGACGTTCAAGAAAAAGACGTCAAGCCGGCATGCAAGTCCGAAAACACGGGTGGATACATTTGCGACATTTGCAAACGAGTCTACAAAACTAAAGACGCCTTAAGATCACACGTGTTAACTCACGGCGAAAGGTGTTTCCTCTGTAGCGAGTGCGGCAAATCATTTTTGACTCAAATGGGACTAAATTCTCACTTAATTATTCACACCGGTAAAATGCCGTACACCTGTACGGTGTGTGAGAAATCCTTTGCACGTGTCGGGAGTTTCGAATCGCACATGTTGATACACACGGGCAAGAAGCCGTACAATTGCAAAGTATGCGGGCAGCCCTTTAGGCTATGGACGCATCTCAAAAACCATTCGAGGACACATAGCGGTGAGAAGCCATACACCTGCAGTTATTGCAATAAAAAGTTCGCTTTAAAAGGAGCATTAACGGTCCACGTTAGAATACATACGGGGGAAAAACCGTACTTATGTCCGATATGTGGCAAGGAATTTGCCATTTCGAGCAACAGGAAGACGCATTGTAGACGTAAACACGGGATAACCTCAGCTAGTGATATATCTAATGCTGAACAGAAATGTACCGATTCTGAAACTAAGTTGGagaaagataaacaaaattag
Protein Sequence: MSVIDIKKVTLPLVKSESTPINVYPYSVTLENFDRVCRFCVGYHDSIEPIFKVWYKNISLQNIIADCTSLKVDVGDFLPQNICPACLAEAIRCYNFREKCLQMESILIDVYNKLNAGETIANVKKENKVSGDEGVKQIEFVAVNDSENFSDPSAHKQLKDKLVTNLGEQCITEGSQGPLFKRSPYSESFNTSICTTICKKRFTKCKLKRHIQVHTKEKPFICKICYQGFRANINLKRHMMTHTGERPHTCEVCGKGFIQTTGLRIHKETHNVLKSSKCFTCEICGRVFKRQGCYHTHLSKHKSKADVQEKDVKPACKSENTGGYICDICKRVYKTKDALRSHVLTHGERCFLCSECGKSFLTQMGLNSHLIIHTGKMPYTCTVCEKSFARVGSFESHMLIHTGKKPYNCKVCGQPFRLWTHLKNHSRTHSGEKPYTCSYCNKKFALKGALTVHVRIHTGEKPYLCPICGKEFAISSNRKTHCRRKHGITSASDISNAEQKCTDSETKLEKDKQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -