Oere000213.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- Znf639
- Assembly
- GCA_031763485.1
- Location
- JARFOC010000018.1:88972-91021[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.2e-05 0.0032 20.1 2.8 3 23 11 31 9 31 0.96 2 15 1.3e-05 0.0032 20.1 1.9 1 23 37 59 37 59 0.99 3 15 0.04 10 9.1 0.4 3 17 67 81 65 82 0.93 4 15 0.24 60 6.6 0.2 1 13 93 105 93 107 0.88 5 15 0.00047 0.12 15.1 4.5 2 23 145 167 144 167 0.94 6 15 0.0058 1.5 11.7 0.4 1 23 187 209 187 209 0.98 7 15 1.8 4.5e+02 3.9 0.7 1 23 212 234 212 234 0.95 8 15 0.00048 0.12 15.1 2.3 1 23 239 262 239 262 0.98 9 15 1.2e-06 0.0003 23.3 0.2 1 23 268 290 268 290 0.98 10 15 0.029 7.3 9.5 0.8 3 23 298 319 296 319 0.92 11 15 5.9e-06 0.0015 21.1 1.6 2 23 330 351 329 351 0.97 12 15 2.1e-05 0.0053 19.4 3.1 3 23 358 378 356 378 0.96 13 15 2.6e-05 0.0065 19.1 1.1 1 23 384 406 384 406 0.98 14 15 5.8e-08 1.5e-05 27.4 0.7 1 23 412 434 412 434 0.97 15 15 0.002 0.49 13.2 1.8 1 22 440 461 440 461 0.95
Sequence Information
- Coding Sequence
- ATGCTACAGCACGAAGCCAGGCATCACCTCTGCGGTATATGTGGTAAAGATTTCTCGAGCAAAGACCTACTACGCGTACACCACAAGATGCATACTGGAATCAAGCAATATAAATGCAGCTATTGTACGAAAGCCTTCGTGAAGCGCCGGTATCTTATAACGCACGAACGCATACACTGTGGAGAGAAACCTTTCGGTTGTGAATCCTGTGGAAAGGCCTTCAATCAGAGAACATCCCTAAAGACTCGCATTCGAGGTCACACTGGCGAGAGACCCTACGTTTGCCACATCTGCAAGACGGGTTTCATATCGAGGATTCAAAGTTTGCAACGGATAATTCAGACACCTGTGTCTTTTTTACCGTCCAAGAAAAAATACCGATCCTCCAGAAGTCAAAAGGAAAACAGACGCCATACCGGCCAAAGAACCTGGTCATGCAAGAAATGTAAGGAGTGTTTCTCGACTGAGCGTGGATTACGCAAGCATCGTAAAGAAACTCATAGGAGGGTAGTCAATCTAAATCGATGCAATTTCTCTTACAACCAGGTCGAAGGTGTCTACGCTTGCGATAGCTGCAGCATGAAGTATAGATCCCAATTAGAGATGGAAGAGCACATTAAAACTCATGATCCATACATCTGTTTAGTCTGCAATGATGAATTTTTTTCGCTGTATAAGTTCTCCGTGCACAATGAGACACACGAACTCGGCTGCTTCAGATGCCCTCTGTGCGATTATCACACAGAGAAGAAGAGCTTGATACAAAGACATATAAAcacaacacatttaaataaGTTTATGTACAACTGCAATATTTGCGGAAAGGGTTTTGAGGATGCGGCCAATTATAGGGACCACCAAAACAGACACGCAGGGGCCAAGGGGATCTCCTGCATAGTGTGCCAGAAGGAATTTATGTTTAGCCGATACTTATTGGTGCACCAAAGGCGATTTCATATGGTCCCCATAGACGGTATCATACAGAATCAATGCAAAATATGCAAACGAGTCCTAAAATCGTCATCCAATTTGGAGAAACATATGTCGCAGCACAAAGTCAGGCATCACCTCTGCGATATATGCGGTAAAGATTTCACGAGCAGTGACTTGCTTCGACTCCACCATAAGATGCATACGGGTATCAAGGAGTTTAAGTGCAGTTACTGTACCAAGGCCTTCGTGAAACGCGAGTACCTCGTGATGCACGAACGGATACATAGTGGCGAGAAACCTTTCGCTTGTGAATATTGCGGCAAGGCCTTCAATCAAAGGACGTCATTGAAGAGGCACATTCGAGGTCACACTGGCGAAAGGCCCTACACGTGTCACATCTGTAAGAACGGATTCATCTCGAAGACGTCGCTTAATTTGCACTTCAAAACTTGCAAAGGACAATAG
- Protein Sequence
- MLQHEARHHLCGICGKDFSSKDLLRVHHKMHTGIKQYKCSYCTKAFVKRRYLITHERIHCGEKPFGCESCGKAFNQRTSLKTRIRGHTGERPYVCHICKTGFISRIQSLQRIIQTPVSFLPSKKKYRSSRSQKENRRHTGQRTWSCKKCKECFSTERGLRKHRKETHRRVVNLNRCNFSYNQVEGVYACDSCSMKYRSQLEMEEHIKTHDPYICLVCNDEFFSLYKFSVHNETHELGCFRCPLCDYHTEKKSLIQRHINTTHLNKFMYNCNICGKGFEDAANYRDHQNRHAGAKGISCIVCQKEFMFSRYLLVHQRRFHMVPIDGIIQNQCKICKRVLKSSSNLEKHMSQHKVRHHLCDICGKDFTSSDLLRLHHKMHTGIKEFKCSYCTKAFVKREYLVMHERIHSGEKPFACEYCGKAFNQRTSLKRHIRGHTGERPYTCHICKNGFISKTSLNLHFKTCKGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -