Oere041381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Osmoderma eremita
Gene Symbol
-
Assembly
GCA_031763485.1
Location
JARFOC010038104.1:877-4411[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00036 0.091 15.5 1.7 1 23 163 185 163 185 0.98
2 16 0.00014 0.036 16.7 5.2 1 23 190 212 190 212 0.95
3 16 9.1e-06 0.0023 20.5 3.3 1 23 218 240 218 240 0.98
4 16 0.00069 0.17 14.6 0.3 1 20 246 265 246 267 0.93
5 16 3.8e-06 0.00095 21.7 1.6 1 23 274 296 274 297 0.96
6 16 0.00015 0.037 16.7 0.3 1 23 465 487 465 487 0.96
7 16 0.00081 0.2 14.4 5.3 1 23 493 515 493 515 0.96
8 16 0.00049 0.12 15.1 3.9 1 23 521 543 521 543 0.98
9 16 0.14 35 7.4 4.5 1 23 549 572 549 572 0.91
10 16 0.00065 0.16 14.7 1.3 1 23 585 607 585 607 0.98
11 16 1.9e-05 0.0049 19.5 6.8 1 23 613 635 613 635 0.97
12 16 1.2e-06 0.00031 23.3 1.0 1 23 642 664 642 664 0.96
13 16 0.00089 0.22 14.3 2.3 1 21 670 690 670 692 0.94
14 16 1.6e-05 0.004 19.8 0.7 3 23 700 720 698 720 0.96
15 16 1.2e-05 0.0031 20.1 0.4 1 23 726 748 726 748 0.99
16 16 0.019 4.9 10.1 0.6 1 23 753 776 753 776 0.96

Sequence Information

Coding Sequence
ATGGAGTGCGTACAATTAGATTTAAACAATGTATGCAGGACCTGTAAAAATGAGTGGCCAGAAATGAAATCTCTGTACTACAGAGATTCGGAATGCGGCAAAGAAAACCCACCTGTGGTTGAGATGGTAATGGCATGTGCATCTATACAGGTTAACAGCGACGACGATTTACCGAAGGTTATATGTCGACCTTGTTACATGCAGTTAAAAAATGCGTACACCTTTAAGGAGCAATGTGAAAAGACAGATGCATTTTGGAGGGAGTACTTGAACAATTTGAAAAAGgcaaatataaaagaagaaactgTGGTAGCCGATTTGGAATATTCCTCAAATTTTATAGATTGCATTAGTTCAGATCAGGTTGCTGCAAATaacgataaaaatatatttgaagagATTAAGAAAGATCCTGAAATTCATTCCCAACAGGTTTCTGAAAAGGACATGGATTATGTGCAggtAATTATGGACAATGTTATAATTTACAAGTGTAGAACTTGTTCTAAAGATTTTTATACATTAGAAGATTTAAGAGtccataaacaaatacattctGCCAAAACTTTTAATTGCAAACAGTGTAATAAATCCTTTTCACGATCAACCTATCTCCATAAGCACGAACTATTGCATGCTATGACAAAAGTTCATGTATGCAAGATATGCAATAAGACATTAACGAGATTTGGAAATTTGAAGAAGCATTTAATGACACATCTTAAAGACAAACCTTATATTTGCTCCAAATGTGATAGGGGTTTCAATCGTGTTCAGCATCTTGAGAACCATGTTATACGCTGTAAAGGCGACAAGGCCTATGTTTGTGATATTTGCAATAAAGCTTTTAAGCGGCAAGATAGCATGGAAGTGCATAGGAAGTTACATCATAATAAATTTCCTGTGATAAAAACGCTAGAAAACCTGGATAACATCTCTGAACACTATACGGAAATTGATTAtgatgaaaaaattatgttcacTGACGAGGAGGAAGAAGATATGGGTATCAAAGAGGAAAATATCGAGCCAGAGGTTGAGGTTTTGGAAAATCATGATCAGGAGAAAATAGATGAGATAGCGCAACTAACTAGTGAGAATTATGTGGAAGAGGATTCACCTGACATGTTAATAGAAAAGGGGAAAATTAAAGAAGAGATTTGTAGGGAAAGTGATAATGGTGATATTGAGGCCGACAactgcaatgtttttaattctgATAaTAGCACATACTCTGAATGTTTACCTGTGAAACAAGTCTCgccaaaaataaagagaagCAAAGGAAGACCAAGTAAGCATTCGGTGCCATACAAATCCATTGGAAAACCTAGAATAAGTCCTTCACTTAAGCATAGAGTTAAGGCAGACTCTAAATCAGAGAACAGTCATTTCGAATGCCCACAATGCAAGATGGTATTTGTGAATCTCAACATGCTAGAAAGGCACACTGAACAACATGGGAGCTTGAAGTTGCACAAATGTGATTCTTGCAATAAGAAATTTAACAGACTGAATAGTCTTAAACGGCATAAATTATTGCATATGAAAACTAAACCGTTTGTGTGTGTGACTTGTCGCAAATGGTTTTCGCGGCGGGAGCATTTGCGGAAACATATGAAACTACATGACAGTTCAGAGGTGCACTCTTGTGATATGTGCCAAGCAGTTTTCCACAAAGCTCAGAATTTGATTAAGCATAAGGCACATAAGCATAGTGTAGGAGAAAAAACAGCTACAGCTGAAAAGAAGTATGAGTGCAAATATTGTTCGGAGACTTTTACTGTAGAGAAGAACAGGGATTCACATATGAAAGTGCACATTGGAGATATGAATCACCAGTGCAAGACTTGTGAGAAGACATTCATTTCAAAATCACATTTAACTGAACATATGAAATTCCATAATGACAGCTCGAAGAATTTTTTGTGTTCTGAGTGTGGGCAGAGGTTTAGTAGGAATGATTATTTAGTTATGCATATGAGGAGGCATCGAGGTGAGAAACCTTTTAAGTGCAAATTCTGCGGTAAGGGCTTTCCCCGAACGACAGATTTAGCAGTGCATGAAAGGTGTCACACTGGCGAGAAAACTCATTTATGCGTCGTTTGCGGAAGAGGATTCGGAAGGGCGTACAAGCTAACAGTTCACATGAGGACACATACTGGCGAAAAGCCTTACCGTTGCACGTATTGTGACGCTGCTTTTGCTCAAGGCAACGACTTGAAAACACACATTCGAAGGCATACGGGAGAACGATTTCAATGTGATatgtgtcccaaaaagtttttgATGGGTTACTTACTAACTCAACACAAGAGGGTAGTGCATggttTGGATATTGTTAGTAATATAAGAAGATTGAAGCCAGCAAATGAAATCAATCCTGATGACCCTCCACCGATAATAGTACCTTTACCTGCACCAGTTATAGTATCAACTGCTGTATGTGGTGATCCCCTGCAAATCAAGAAGACAGAGATACCTGAACTGAAGCAGCAATAG
Protein Sequence
MECVQLDLNNVCRTCKNEWPEMKSLYYRDSECGKENPPVVEMVMACASIQVNSDDDLPKVICRPCYMQLKNAYTFKEQCEKTDAFWREYLNNLKKANIKEETVVADLEYSSNFIDCISSDQVAANNDKNIFEEIKKDPEIHSQQVSEKDMDYVQVIMDNVIIYKCRTCSKDFYTLEDLRVHKQIHSAKTFNCKQCNKSFSRSTYLHKHELLHAMTKVHVCKICNKTLTRFGNLKKHLMTHLKDKPYICSKCDRGFNRVQHLENHVIRCKGDKAYVCDICNKAFKRQDSMEVHRKLHHNKFPVIKTLENLDNISEHYTEIDYDEKIMFTDEEEEDMGIKEENIEPEVEVLENHDQEKIDEIAQLTSENYVEEDSPDMLIEKGKIKEEICRESDNGDIEADNCNVFNSDNSTYSECLPVKQVSPKIKRSKGRPSKHSVPYKSIGKPRISPSLKHRVKADSKSENSHFECPQCKMVFVNLNMLERHTEQHGSLKLHKCDSCNKKFNRLNSLKRHKLLHMKTKPFVCVTCRKWFSRREHLRKHMKLHDSSEVHSCDMCQAVFHKAQNLIKHKAHKHSVGEKTATAEKKYECKYCSETFTVEKNRDSHMKVHIGDMNHQCKTCEKTFISKSHLTEHMKFHNDSSKNFLCSECGQRFSRNDYLVMHMRRHRGEKPFKCKFCGKGFPRTTDLAVHERCHTGEKTHLCVVCGRGFGRAYKLTVHMRTHTGEKPYRCTYCDAAFAQGNDLKTHIRRHTGERFQCDMCPKKFLMGYLLTQHKRVVHGLDIVSNIRRLKPANEINPDDPPPIIVPLPAPVIVSTAVCGDPLQIKKTEIPELKQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-