Oere004629.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Osmoderma eremita
Gene Symbol
-
Assembly
GCA_031763485.1
Location
JARFOC010000345.1:777018-779363[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.084 21 8.0 4.8 1 23 217 239 217 239 0.96
2 16 0.12 29 7.6 3.1 1 23 245 267 245 267 0.98
3 16 5.5e-06 0.0014 21.2 5.3 1 23 273 295 273 295 0.98
4 16 0.0012 0.29 13.9 8.2 1 23 301 323 301 323 0.98
5 16 0.0001 0.026 17.2 4.1 3 23 331 351 329 351 0.98
6 16 6.2e-05 0.016 17.9 3.8 1 23 357 379 357 379 0.98
7 16 1.7e-05 0.0042 19.7 0.7 1 23 385 407 385 407 0.99
8 16 3.4e-05 0.0085 18.7 2.8 1 23 413 435 413 435 0.99
9 16 0.00018 0.045 16.5 1.5 1 23 441 463 441 463 0.98
10 16 0.00015 0.038 16.7 5.0 1 23 469 491 469 491 0.98
11 16 6.5e-05 0.016 17.8 0.2 1 23 497 519 497 519 0.98
12 16 0.01 2.6 10.9 8.9 1 21 525 545 525 547 0.95
13 16 1.1e-06 0.00028 23.4 0.2 1 23 553 575 553 575 0.99
14 16 2.1e-05 0.0052 19.4 4.7 1 23 581 603 581 603 0.98
15 16 1e-05 0.0026 20.4 1.7 1 23 609 631 609 631 0.98
16 16 3.2e-06 0.00081 22.0 1.8 1 23 637 659 637 659 0.98

Sequence Information

Coding Sequence
ATGGAAGAAATTCCTGTTGGAATaacattagaaaataaattgcaatcATCTACTGTTAAAATAGAGGGTTATATATCTAATACAGCAACACAATATCAAGAAGGGTGCTATCATCCAATTGTAAAGGGAGAACTTACTCGTCGTGACAAATGCAATTTGAGCGAAAACACAGAATACCTGTTTCATAATCACTATGACAACATAAAACAAAGTAACCACTGCGAATATAACCAAAATGTGGGCAGTGGCCGATTCTTACGGAATATAGATTTTCCGATGTATCAAGAACAACCGATGAATCTTGTACGCGAAAGTCATCTTAACAACATTCTTCTacctaaaaataatgaaatgtttGAATACAAAAGTGTATCACAAGTGAATAATTTAAGTGATATTCATGGCTTGGATAGCGAGCCAGCAATTACGACTAGTATAAAAGAAGAACCCTGTGATGAAACAGACGAACTAAACTATCCAGGGGATTGTAATGACGTTTTGTCGACAAAATCTAGAAGTGTGGTCGACAGTCAAAATAAAAGCTATTCTACAACAGATTTGCACGCAGATGTGTATAATATATCCCATCACTTTTTGTGCACGAATAAACAGGTGTCTGAGAATCCGGATGATGACTCGAATAAAAAACATACTTGCGATATTTGCTTTAAGAGGTTCAAGTGTAAAACATACCTGGTCGCCCATCGTGCAATTCACACAGGTGATGTACCTTTTAAATGTAATGTGTGTAATAAAGAGTGCTTAACGAAGCAACAGATGATTTACCACGAGAGGATTCATACGGGAAATAAACCGCATAAGTGCGAAACATGTCCGAAAAGTTTCATGAGTAGCAAAGATTTGAGACATCACATTCGGACACATACAGGGGAAAAGCCGTATTGTTGTGAAACGTGTCAGCGGTGTTTTTCCTTGAAGAAGAATTATGAGACCCACCTTCGAACGCACACCAAAGAAAAACCGTACGGTTGTAAGACGTGTGGGAAACTATTCAGTAGAATGGACCACCTTAAGCATCACGTCCGTATACATACGGGTGAGAAACCGTTTAGATGCGATATGTGTGCGAAGACGTTTTCCAGGAAATGCCTATTAATGTTGCATATAAGGTATCATATGGGCGTGAAACCGTACAAGTGCGATATATGTCAAAATGCCTTTGCCGAAAAGAATACCTTGACTAGGCATGTTCGCACCCACACGGGTGAAAAACCCTATCGTTGCGAACAGTGTGGAAAATGTTTTGCCGGACGGAAAGACCTACTGACACACAGTAAAACACATACGGACGAAAAGGGTCACAAGTGTGATGTCTGTCTAAAAGATTTTAAGACTCGAGCTTATTTGCTGGTGCATTTGAAGATACACGTTCCAGAAAAACCGTACAATTGTCACCTCTGCGAAAAGGGCTACAATACGAGGGAGAAATTGACACATCACATCAGGTCTCACACTGGGGAACGACCGTTTCAGTGTGCCATGTGCCAAAAGGCTTTCTTGAGTAAAGGGGAGTTGACGAGACATATCATGATTCACACGGGTGAGAAACCGCACAAGTGCAGAGAATGTCTAAAATGTTTCATCACTAAGGGCAAGCTAAATAGACATATGAAGTGCCACTTGAACGAAAAGGAATATAAATGTGTTTTGTGCGACAAGGCCTTTGCACAGAAGGACGGTTTAGCCACTCACATAAAGACCCACACCGGTGAAAAAGCTTTCGAGTGTCATTTCTGTAAGAAACGTTTTATAACGGCCGAACACTTGCGTGGTCACATTAGATCTCACACGGGAGAAAAGCCattcaaatgtaaaatatgcGATAAGAGGTTCTCGTTGCGTGGGAATGTGAGTACACATATGAAATTGCATTCCGGTATAAAACCGCACAAGTGCGAGGTGTGCGAGAGGGGTTTTGCACAGAGAAGTACCCTTCTAAATCATATGAAAACACATCGAAATGTACAAAGTATCCTCCCTACGGAATATATTAAGCAGGAAGAGTATAATGTGGACGACATTAAGCAGGAAAACATCGACGATAGTATAGACATAGGGGATGCTGGTGTTAATGTTGATGTTTGTAGTGAAATAGGGAATGCTACGAGGCAGGCGCGATTTATTTCTCCAGAAAATTCCATGAAAACTGAAGTAGATGTTAAAGAAGAATGTCTAGAAAACGATCcatgttaa
Protein Sequence
MEEIPVGITLENKLQSSTVKIEGYISNTATQYQEGCYHPIVKGELTRRDKCNLSENTEYLFHNHYDNIKQSNHCEYNQNVGSGRFLRNIDFPMYQEQPMNLVRESHLNNILLPKNNEMFEYKSVSQVNNLSDIHGLDSEPAITTSIKEEPCDETDELNYPGDCNDVLSTKSRSVVDSQNKSYSTTDLHADVYNISHHFLCTNKQVSENPDDDSNKKHTCDICFKRFKCKTYLVAHRAIHTGDVPFKCNVCNKECLTKQQMIYHERIHTGNKPHKCETCPKSFMSSKDLRHHIRTHTGEKPYCCETCQRCFSLKKNYETHLRTHTKEKPYGCKTCGKLFSRMDHLKHHVRIHTGEKPFRCDMCAKTFSRKCLLMLHIRYHMGVKPYKCDICQNAFAEKNTLTRHVRTHTGEKPYRCEQCGKCFAGRKDLLTHSKTHTDEKGHKCDVCLKDFKTRAYLLVHLKIHVPEKPYNCHLCEKGYNTREKLTHHIRSHTGERPFQCAMCQKAFLSKGELTRHIMIHTGEKPHKCRECLKCFITKGKLNRHMKCHLNEKEYKCVLCDKAFAQKDGLATHIKTHTGEKAFECHFCKKRFITAEHLRGHIRSHTGEKPFKCKICDKRFSLRGNVSTHMKLHSGIKPHKCEVCERGFAQRSTLLNHMKTHRNVQSILPTEYIKQEEYNVDDIKQENIDDSIDIGDAGVNVDVCSEIGNATRQARFISPENSMKTEVDVKEECLENDPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-