Oere011287.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010000983.1:144290-148337[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00034 0.085 15.6 2.8 1 23 11 33 11 33 0.97 2 15 0.00012 0.031 17.0 1.0 2 23 58 80 57 80 0.95 3 15 6.1e-05 0.015 17.9 1.7 3 20 89 106 87 108 0.95 4 15 0.00014 0.036 16.8 0.1 3 23 119 140 117 140 0.93 5 15 0.0024 0.59 12.9 0.1 2 20 152 170 151 170 0.95 6 15 0.032 8.1 9.4 0.1 2 23 182 204 181 204 0.96 7 15 0.00017 0.043 16.5 1.4 1 23 210 233 210 233 0.95 8 15 0.00082 0.21 14.4 0.7 2 23 242 264 241 264 0.96 9 15 0.00041 0.1 15.3 0.8 2 23 271 293 270 293 0.93 10 15 1.6 4e+02 4.0 3.5 1 23 298 320 298 320 0.94 11 15 2.5e-06 0.00063 22.3 0.6 1 23 328 350 328 350 0.98 12 15 0.00017 0.044 16.5 0.5 1 23 357 379 357 379 0.97 13 15 3.9e-07 9.8e-05 24.8 0.0 1 23 385 407 385 407 0.99 14 15 5.4e-07 0.00014 24.4 2.1 1 23 413 435 413 435 0.98 15 15 5.9e-06 0.0015 21.1 0.5 1 23 441 463 441 463 0.98
Sequence Information
- Coding Sequence
- ATGAAAGTTCCCACCGGTAACAGAAAATCACATGTGTGCGATGTCTGTGGTAAGATTTATTGCTCGACTCAAGGTCTGAAGATCCATAGACGCCAACATACAGGTGAAAAGCCGTGCGTAAAACCCGAAGATGTCAAGTTGACCATCGTAAGCGCTTCCGgtgcaaatttgaattgtgctatCTGTTCGAAATCGTTCGAGAGCAAACGCAAACTTCGCGAACACGAACGAAAAATACATACGAACCTCGTCTGTGAGCACGGGTGCGAAAAGTGCGGCAAACGCTTCCGCAGGGCAGCGAACCTAGCCAAACATAAGACGCACCCCTGCGAAAAAAACAAGGAACCCGTAGCGTGTTCCCAATGTCCCCAGGTCTTCTCTCGTCGCCTCAATCTGATCAGACACGAGAAGGCGGTGCACATGGGTCAGGTCGTTAGAAAGTCGGAGAATGTCGTCTGCGAACTGTGTTCGAAACAGTTCGGTAATCAGATTAGTTTGCGTCGACACCAGTGGGCGATGCACAAAGAAAAGTTTGCGTCCGTTCGCTGCGACATTTGTGCTATACCGTTCGGTACCACCGAGGAAATGGAGAAGCACAAGAAGCGTTGGCACGAGGAAGGGGTTAGTTACGAGTGCGATGTCTGTAAGAAGAGTTTCAGGTCGACGACCCGCCTGGAAAGCCATAAGAAAGAGGTGCATGAGTCATCGTCCTTCGAGGGATCAGAGTGTCCGGTATGCTTTAAGCGTTCGCATTCCCAGGCGTGGTTGGCTAAACACATGAAAGTCATGCACCCGAAAGAACCGAAGAACAAATGCGATAAATGCGAAAGAGCCTTTCGCTCCCTCCGGCAATTAGAGGAACATCAATTTTTGGATCACGACGGCCAACGTTATAACTGCGACGCCTGCGAGAAGTCCTTTAGGTGTAAACGTCGCTACAGCGAACACGTACTAACACACCAACCGGGTTACGTTAACGaatacccttgctcggtttgtTCGAAGGTGCTTACGAACCGTAAAGCCTTGAAGAAACACATGAAAATCCACACGGGCGATCGAGAGGTGCACGTGTGCGAAATCTGCGGGAAAGCTTACACTTCGGCGCAAATTTTAAGGGTGCACAGACGCAATCATACTGGCGAGAGGCCGTACGTCTGCGAACTTTGCGGAAAAGGCTTTGCCGATGGCGGCAATCTAAATTTGCACATGCGGACTCACACCAAAGAGAAGCCGCACAAGTGTGATATTTGCGGAAAGAGGTTTACGCAGAGGATCACGCTGACGCTTCACTTGCGGATCCATCGAGGGGAAAAGCCGTACGAGTGTGCTATTTGTCAGAAAAAGTTCGTTTCCAAGTCTTTGCTGAATGTCCATTCGAAAATCCACGGAACGCTCTGA
- Protein Sequence
- MKVPTGNRKSHVCDVCGKIYCSTQGLKIHRRQHTGEKPCVKPEDVKLTIVSASGANLNCAICSKSFESKRKLREHERKIHTNLVCEHGCEKCGKRFRRAANLAKHKTHPCEKNKEPVACSQCPQVFSRRLNLIRHEKAVHMGQVVRKSENVVCELCSKQFGNQISLRRHQWAMHKEKFASVRCDICAIPFGTTEEMEKHKKRWHEEGVSYECDVCKKSFRSTTRLESHKKEVHESSSFEGSECPVCFKRSHSQAWLAKHMKVMHPKEPKNKCDKCERAFRSLRQLEEHQFLDHDGQRYNCDACEKSFRCKRRYSEHVLTHQPGYVNEYPCSVCSKVLTNRKALKKHMKIHTGDREVHVCEICGKAYTSAQILRVHRRNHTGERPYVCELCGKGFADGGNLNLHMRTHTKEKPHKCDICGKRFTQRITLTLHLRIHRGEKPYECAICQKKFVSKSLLNVHSKIHGTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -