Oere051970.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Osmoderma eremita
Gene Symbol
-
Assembly
GCA_031763485.1
Location
JARFOC010055005.1:1-18600[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.034 8.6 9.3 4.5 1 23 11 33 11 33 0.99
2 22 0.00043 0.11 15.3 0.7 1 19 67 85 67 85 0.96
3 22 0.00014 0.035 16.8 0.8 1 21 377 397 377 398 0.94
4 22 0.0018 0.46 13.3 1.1 2 23 407 428 407 428 0.97
5 22 0.00065 0.16 14.7 3.9 1 23 434 456 434 457 0.96
6 22 7.9e-07 0.0002 23.9 1.6 1 23 462 484 462 484 0.98
7 22 0.00011 0.029 17.1 2.9 1 23 491 513 491 513 0.96
8 22 0.44 1.1e+02 5.8 0.1 1 23 519 541 519 541 0.94
9 22 0.00013 0.033 16.9 0.2 1 20 547 566 547 569 0.92
10 22 0.00012 0.03 17.0 0.3 1 20 578 597 578 598 0.95
11 22 0.00023 0.058 16.1 1.0 2 22 627 647 627 647 0.94
12 22 7.6e-05 0.019 17.6 1.2 1 23 696 719 696 719 0.94
13 22 0.0072 1.8 11.4 1.5 2 23 726 747 726 747 0.97
14 22 0.00065 0.16 14.7 3.9 1 23 753 775 753 776 0.96
15 22 4e-06 0.001 21.6 2.8 1 23 781 803 781 803 0.98
16 22 0.0056 1.4 11.7 3.7 1 23 810 832 810 832 0.97
17 22 3.4e-05 0.0085 18.7 2.7 2 23 864 885 864 885 0.97
18 22 0.00018 0.045 16.4 0.7 2 23 934 956 933 956 0.93
19 22 0.0018 0.46 13.3 1.1 2 23 963 984 963 984 0.97
20 22 0.00065 0.16 14.7 3.9 1 23 990 1012 990 1013 0.96
21 22 2.3e-05 0.0057 19.3 1.6 1 23 1018 1040 1018 1040 0.98
22 22 0.044 11 8.9 2.2 1 23 1047 1069 1047 1069 0.98

Sequence Information

Coding Sequence
ATGAAAGCGCACGATCCTAGCCAGAAGAAATACGTTTGCAAGATATGCTCGGAGGTGTTCCATTGCCAGAGTTCCTATATGGGTCACATGCGTCGTCACGAAGGTTCGGCGCTGCATATCGATGAGATATGTGGCAAGAGGATGACTAGGGTCGCGTCTTTGGTCACTGATAAAATGACACATACTAGAGCAAGGCCACAtatttgcgacacttgcggcaaggctttcacccggaAGACAGATGTTACGAGACATGATTATTTGTGGCCACAAGTGGCAAATGTTGATCTGAACAATGCTTTCGTTCAACGGGACCGTGCCACATGTCGCACCTGGAGCGAATCTATCGCATTGTTGCACGAAAAATTTCCGGGAAGGATTATTCCACAGAATTGTGAAATGCAAACTGGCCGTGCAGGTCGTACGATCTCATCCCTTTGCACTTCTTCTGCCTTAATTTCTATTATAGCAAAGATTATGGGAAGAGCAATCCTAAAGAGACTAGTAGAGTTTGCAGAATCTTGTAGTCTATTAACTGATCTACAAAATGGATATATTCAGGGTAGGTCAACCGTAAGAGCAATATACATGTCAGTTAGTAAAATAATGGAACTAATCTCTAATAAGAAGAATGTCGCGGGAATATTCTTGGAcctatcaaaagcctttgacagcGTCGACCATAAAATACTACTACAAAAGCTAGAACTAATGGGTTTCCGAGGAGTAGTACttaatttagtaaaatcatACTTGACAGGTCCCAAACAATGTGAACAATTGGACATCGATAATGAACTAGTGCAATCAAATTGGCTGACCACAGAAGGGGATGTACCACACGCTTCAACGTTGGGagcatttttgtttatactatACACGAATGACTTACCTGATATAACaacatatattgtaaatatgtacgcCGACGATACTTCAGTGATAATAACGGAAGGGAAGAAGAAATTATCAACATTATTGCTACCATGGGTCTTTCTTTCCAGGCTTATACCAGTACATATAAAAGTCGATGAGGTAGAAGAGGGCCCTTATGACGTAACATCAGTGCactttacacaagaagatttggaacgccacaataaaACAACGATTGAGAATTGCGCAGAGTTCATATGCGAAAAGTGTGGAAGAACGTTTAAGAAAAAGGAAAGCTATAACGCCCACAAAAAAGCAATACAACAAAAGAGTCAGGACAACAGGTGCGAATTTTGCGACGAGTTCTTCGTGAATTGTGAAAATTTAGCCATACACAGGGCGCGACACAcgaaagaatttaaatatatgtgcGACAAATGCGAGTGCGGCTTTATTCGGCCGTACGATTTAAAGCTTCACCAGAAAAACCATCATAATATGCCTCAGTTTTCTTGCGATAAATGCGGGAAAACATTCCGGCTCAGGAAAGAGCTCACGAGGCACATCATAACGCACGACTCTAACAGGGAGAAGCACGCGTGCAAAATATGTTCGGCCGTGTTCCGTTACAAAAGTTCCTATTTGCGTCACCTGCGTCGCCACCCAGGTACGGCGCGGCATTCCTGTGCGATATGTGGCAAGAGGATGCTTACAGCCGCTGCGTTGGTCATTCATAAGCGCATACATagtggagaaaagccgttcgtttgtgacGCTTGCGGAACGGGTTTCACTCAGAAGTCAGATCTTACCAGACATGCACCGACACATACCGAAGAAAAGCAAGAAAAGCGGTTCGTTTGCGagacttgtgggaaggctttcacccggaaAAGAGAATTTATGgaacatGTCTACTGTGCCCAACCACCTATCATACTATTTATTCGACCGTACGATTTAAAGTTTCATCAGAAAGAGCATCATAGTATGCCTCAGCCTTCTTGCGATAAATGCCGGAAAACATTCACGCTCAGGACAGAGCTCACGAGGCACATGATAACGTACGACTCTAACAGGGTGAAATTTATACCAGTACATATAAAAGTCGATGAGGTAGAGGAGGGCCTTTATGACGTAACATCAGTGCactttacacaagaagatttggaacgccacaataaaACAACGATTGGGAATTGCGCAGAGTTCATTTGCGAAAAGTGTGGAAGAACGTTTAAGAAAAGGGAAAGCTATAACGCCCACAAAAAAGCAATACACCAAATGAGTCAGGACAACAGGTGCGAATTTTGCGACGAGTTCTTCGTGAATTGTGAAAATTTTGCCATACACAGGGCGCGACACAcgaaagaatttaaatatatgtgcGACAAATGTGAGTGCGGCTTTATTCGGCCGTACGATTTAAAGCTTCACCAGAAAAACCATCATAATATGCCTCAGTTTTCTTGCGATAAATGCCAGAAAACATTCCGGCTCAGGAAAGAGCTCACGAGGCACATGATAACGCACGACTCTAACAGGGAGAAGTACGCGTGCAAAATATGCTCGACCGTGTTCCGTTGTAAAAGTTCCTATTTGCGTCACCTGCGTCTCCACCCAGGTCTACTGTGCCAACTACCTATCATACTATTTATTCGGCCGTACGATTTAAAGTTTCATCAGAAAGAGCATCATAGCATGCCTCAGCCCTCTTGCGATAAATGCCGGAAAACATTCACGCTCAGGACAGAGCTCACGAGGCACATGTTGACGCACGGCTCCAACAGCGTGAAGTTTATACCAGCACAGATAAAAGTTGATGATATAGAGGAGGGCCCTTATGCCGTAACATCAATGCactttacacaagaagatttggaacgccacaataaaACAACGATTCAGAATTGTACAGAGTTAATATGCGAAAAGTGTGGAAGAACGTTTAAGAAAAGGGAAAGCTATAACGCCCACAAAAAAGCAATACACCAAAAGAGTCATGACAACAGGTGCGAGTTTTGCGACGAGTTCTTCGTGAATTGTGAAAATTTAGCCATACATAGGGCGCGACACAcgaaagaatttaaatatatgtgcGACAAATGCGAGTGCGGCTTTATTCGGCCGTACGATTTAAAGCTTCACCAGAAAAACCATCATAATATGCCTCAGTTTTCTTGCGATAAATGCCGGAAGACATTCCCGCTCAAGAAAGAGCTCACGAGCCACATGATAACGCACGACTCTAACAGGGAGAAGTACGCGTGCAAAATATGCTCGGCCGTGTTCCGTTGCAAAAGTTCCTATTTGGGTCACTTGCGTCGCCACCCAG
Protein Sequence
MKAHDPSQKKYVCKICSEVFHCQSSYMGHMRRHEGSALHIDEICGKRMTRVASLVTDKMTHTRARPHICDTCGKAFTRKTDVTRHDYLWPQVANVDLNNAFVQRDRATCRTWSESIALLHEKFPGRIIPQNCEMQTGRAGRTISSLCTSSALISIIAKIMGRAILKRLVEFAESCSLLTDLQNGYIQGRSTVRAIYMSVSKIMELISNKKNVAGIFLDLSKAFDSVDHKILLQKLELMGFRGVVLNLVKSYLTGPKQCEQLDIDNELVQSNWLTTEGDVPHASTLGAFLFILYTNDLPDITTYIVNMYADDTSVIITEGKKKLSTLLLPWVFLSRLIPVHIKVDEVEEGPYDVTSVHFTQEDLERHNKTTIENCAEFICEKCGRTFKKKESYNAHKKAIQQKSQDNRCEFCDEFFVNCENLAIHRARHTKEFKYMCDKCECGFIRPYDLKLHQKNHHNMPQFSCDKCGKTFRLRKELTRHIITHDSNREKHACKICSAVFRYKSSYLRHLRRHPGTARHSCAICGKRMLTAAALVIHKRIHSGEKPFVCDACGTGFTQKSDLTRHAPTHTEEKQEKRFVCETCGKAFTRKREFMEHVYCAQPPIILFIRPYDLKFHQKEHHSMPQPSCDKCRKTFTLRTELTRHMITYDSNRVKFIPVHIKVDEVEEGLYDVTSVHFTQEDLERHNKTTIGNCAEFICEKCGRTFKKRESYNAHKKAIHQMSQDNRCEFCDEFFVNCENFAIHRARHTKEFKYMCDKCECGFIRPYDLKLHQKNHHNMPQFSCDKCQKTFRLRKELTRHMITHDSNREKYACKICSTVFRCKSSYLRHLRLHPGLLCQLPIILFIRPYDLKFHQKEHHSMPQPSCDKCRKTFTLRTELTRHMLTHGSNSVKFIPAQIKVDDIEEGPYAVTSMHFTQEDLERHNKTTIQNCTELICEKCGRTFKKRESYNAHKKAIHQKSHDNRCEFCDEFFVNCENLAIHRARHTKEFKYMCDKCECGFIRPYDLKLHQKNHHNMPQFSCDKCRKTFPLKKELTSHMITHDSNREKYACKICSAVFRCKSSYLGHLRRHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-