Oere013723.2
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- ZEB2
- Assembly
- GCA_031763485.1
- Location
- JARFOC010001321.1:1158121-1168716[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 7e-05 0.018 17.7 2.8 1 23 120 142 120 142 0.98 2 23 1.3e-05 0.0032 20.1 2.8 1 23 148 170 148 170 0.98 3 23 8.9e-05 0.022 17.4 8.8 1 23 175 197 175 197 0.98 4 23 3.4e-05 0.0086 18.7 0.6 3 23 205 226 203 226 0.96 5 23 0.0019 0.47 13.2 0.5 1 23 231 253 231 253 0.97 6 23 0.0039 0.98 12.2 2.8 1 23 263 285 263 285 0.97 7 23 2.2e-07 5.6e-05 25.6 0.7 1 23 291 313 291 313 0.97 8 23 0.0011 0.27 14.0 4.1 1 23 319 341 319 341 0.98 9 23 2.8e-05 0.0071 19.0 0.1 1 21 347 367 347 368 0.96 10 23 0.014 3.4 10.5 0.2 2 20 447 465 446 468 0.81 11 23 0.29 72 6.4 4.2 1 23 474 496 474 496 0.97 12 23 0.005 1.3 11.9 1.8 1 23 502 524 502 524 0.90 13 23 0.00026 0.065 15.9 3.4 1 23 530 553 530 553 0.98 14 23 0.00045 0.11 15.2 4.1 1 23 565 588 565 588 0.95 15 23 0.47 1.2e+02 5.7 0.4 3 23 599 619 598 619 0.94 16 23 0.00011 0.027 17.2 0.2 1 23 625 647 625 647 0.97 17 23 1e-05 0.0026 20.4 0.7 1 23 653 675 653 675 0.98 18 23 0.76 1.9e+02 5.0 0.1 1 14 681 694 681 697 0.91 19 23 0.0039 0.98 12.2 0.0 1 23 792 814 792 814 0.97 20 23 2.2e-05 0.0054 19.3 1.0 1 23 826 849 826 849 0.97 21 23 0.0053 1.3 11.8 0.4 3 23 860 880 859 880 0.98 22 23 0.00026 0.066 15.9 0.8 1 23 886 908 886 908 0.97 23 23 1.6e-06 0.00041 22.9 0.4 1 23 914 936 914 936 0.99
Sequence Information
- Coding Sequence
- ATGGTCGTTGACGAGGGTTGGAAAGATAAAATCCAGGATGAAGatctAAACCGATACCAAGAAAATACGTACACCGACTTCAATTATCAACAGGCAAGTCATGCGCTACAAGCAGATGATAATCTCCTCGCCGATAACAATCTGTTAGAAAACGCCGTGGCTCAATTGAGCGATCCAGATTCCGAACTGTTAAATTTACTAGCCTCAGGAGAAGATATCCTGCGAAAGATAACAGAAAGCGAACATTTTGAGCAGCTGATCAACGGGGAATGCATCGCTGACGAACTGATTACCACTGGTGTTGCCCAAAAGAGATATGAATCACCGGAAACGGTTGTGGAGAAGGCAAAAGAGGATTTTAAGTGCGATTTTTGCGAAAGAGTTTGCCCCACGAAGAAATTACTCAAGAACCACATGATGATCCATACAAGTTCGAGGCCTTACTCGTGCGAGATTTGCGAGAAAACCTTCAGGCACAATTTCGAGGTGAAAGTGCACATGAAAAGTCACAACAAGCCGACGCATCAGTGCgatatctgctcgaaaatgtTTATACACAAATCTCACTTGACTACCCATAGAAAGAAGCACTTGGGTGATTTCTCTGTAATTTGTGAAATCTGTGACAAGGGATTTGTATCGCAATCCAGCTATAATCACCACGTCAAAGTTAAACACGAGAGAATTTTGCACGTTTGCGAGATTTGCGGATCAAAATTGAGTTCCCTCTCCGCTCTGAAAGAGCACAAGTTGACCCACGAACCTGATTATCACGGAAATAGGACGCACGTTTGCGAATTCTGCGGCAAAAGTTACTTGAGCGCCAGACATTTGCGCGGTCACATAAAGAGCCACACGGAAATTAGTGATTTTTCTTGTGACATCTGCGGGAAGACTTTAACAACGAAATCGAATTTACGCAAACATATCGCTAATCATAGCAAAGATAAGCGGTTCCAATGTAGTTACTGTTCGAAACGTTTTGTTTGCAAAGATAATTTGACGGTGCACAATAGGGTACACACTGGTGATAAGCCGTTTAAGTGTGGCGTTTGTGGTAAGGGATTCGCACAGAAGGTGTCGCTAACGGTGCATACAAGattcATCAGAAATCGTACCCGCAAGAAACAACAAGGACAGAAACATGTCGACTCCAACTCTGAAGCTATTGAGATAAAAATTGAACCGGAAGACTACGACTCCAACGCCAATGATGATAACAATGATAATTCTGCAGACGTTGACAATGATAATGAAGATCTATTATCCAGGCTGCACCGTATGCGGTCTAAGAAGGGGaggaacaaaaagaaatttaagagTCCCACGGAAGCGATACAGTGTGAAGTGTGTGATAAGACCTTTAGAGATAGTGTAAGATTCGGATTGCACTCGATAGAGCACAGTACTGATTCCAAGTATCATTGTTTCATGTGTAAATATGCGAGTGGCTCTCAGTATCATTTCGAGATGCATATTAAGGCCCACGAGGGTAATACTAAGTACAAGTGCGAGATATGCAACAAAGCCTTCACGGTCAGCACCCACGCAGCGGAACATAAATACTTTCACAGCGGCGAGAAGCCTTTTCAATGTGAAATATGCGGAAAGCACTTCATGTTCTCGTGGTTCTTAACTTCGCACAGACGTTCACAGCATTGGGAGATCATGACGGGCACTCCCTTAGTAAAATACGATTGCACCATCTGTAATAAGCATTACACCTCGTCGACTGGGTTGAAACGTCACAAGAGTAGCAAACATTTGGATAACGAGCGCGAATTTGGCGTTCTCTGCGATATCTGCGGCAAACGCCTAGCCAGCATGGAGAAACTGAAATTCCATAATAGAATCCATACTGGGTACAAGCCTTATGCGTGCGGTTATTGCGCTAAAGCTTTCTCTAGGAAGGAACAGGTGAAAGAACACGAAAGGGTGCATACTGGGGAGAAGCCGTACATCTGCAGGTTCTGTGGAAAAGGTTTTACCCAGCGCAGCCCCTTGAGGATCCATGAAAGGACTCATACTGGCGAAAGACCTTACACCTGCAGATTGTGTGAAAAAGGCTTCATATCGAAGGGGgaCCGAATCGATTCAAATCTTACTGAAACCGATCTAAAAATTAAACCTTTGTACTACGAAGCGTACACAGACCAAGGGGATTCGACTATACCCGACGAAGATCATTATGAAGGAAAAGATGATTATACTTTTGGCGAAGATAATTTTGGAAAAGTGGATGATGATTCGTCTGAAGAGGACGAGGACGATGAGTATTTGCCTGCGGGCAGACAAGTCAAAGGTCTAAAAAGGAAAATTGGTAAAGATAAATCTAGTGCTTCTTCGTCCGAATTACAAAAAGAATCTTTAACATACCCTTGTCCCAAGTGTGACTATGTTAGTGAGAATGTATTTGACCTCGAAGCACACGTGAAGGGTCATACGAAAACTAAAAAGGAACGCCCCAAGCTGGTATATAATTGTAGCGTCTGCTCAAAACAGTATACCACGCCCAGTGGGCTAAAACAGCACGTGAAGACACAACATTTCGGCGTATCTCTCACGCAAGGGCCCCTCTGCGACATATGCGGTAAACGTTTAGCCAATGAGAACAGGCTCAGGGATCACAAGCGCATACATGCGGGTGAGAAACCGTTTGCGTGTGTCTTTTGTGGTAAAACCTTCGCGAAGAAGACTACAATGAAGGAGCACGAGAGAGTGCACACGAACCAACGTCCGTACGTTTGTAAATACTGCGGGAAGGCCTTCACGCAGCGCACTCCCCTGGTTGTTCACGAGAGGACGCATACTGGTGACAAGCCTTATAAATGCATCATCTGTAAGAAAGGTTATCCGTCCAAGGGTATCAGAGATACGCACATGAAGAGTTGTAAAGGGGAGTAA
- Protein Sequence
- MVVDEGWKDKIQDEDLNRYQENTYTDFNYQQASHALQADDNLLADNNLLENAVAQLSDPDSELLNLLASGEDILRKITESEHFEQLINGECIADELITTGVAQKRYESPETVVEKAKEDFKCDFCERVCPTKKLLKNHMMIHTSSRPYSCEICEKTFRHNFEVKVHMKSHNKPTHQCDICSKMFIHKSHLTTHRKKHLGDFSVICEICDKGFVSQSSYNHHVKVKHERILHVCEICGSKLSSLSALKEHKLTHEPDYHGNRTHVCEFCGKSYLSARHLRGHIKSHTEISDFSCDICGKTLTTKSNLRKHIANHSKDKRFQCSYCSKRFVCKDNLTVHNRVHTGDKPFKCGVCGKGFAQKVSLTVHTRFIRNRTRKKQQGQKHVDSNSEAIEIKIEPEDYDSNANDDNNDNSADVDNDNEDLLSRLHRMRSKKGRNKKKFKSPTEAIQCEVCDKTFRDSVRFGLHSIEHSTDSKYHCFMCKYASGSQYHFEMHIKAHEGNTKYKCEICNKAFTVSTHAAEHKYFHSGEKPFQCEICGKHFMFSWFLTSHRRSQHWEIMTGTPLVKYDCTICNKHYTSSTGLKRHKSSKHLDNEREFGVLCDICGKRLASMEKLKFHNRIHTGYKPYACGYCAKAFSRKEQVKEHERVHTGEKPYICRFCGKGFTQRSPLRIHERTHTGERPYTCRLCEKGFISKGDRIDSNLTETDLKIKPLYYEAYTDQGDSTIPDEDHYEGKDDYTFGEDNFGKVDDDSSEEDEDDEYLPAGRQVKGLKRKIGKDKSSASSSELQKESLTYPCPKCDYVSENVFDLEAHVKGHTKTKKERPKLVYNCSVCSKQYTTPSGLKQHVKTQHFGVSLTQGPLCDICGKRLANENRLRDHKRIHAGEKPFACVFCGKTFAKKTTMKEHERVHTNQRPYVCKYCGKAFTQRTPLVVHERTHTGDKPYKCIICKKGYPSKGIRDTHMKSCKGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -