Oere004605.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- ZNF236
- Assembly
- GCA_031763485.1
- Location
- JARFOC010000345.1:475587-486750[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0095 2.4 11.0 1.7 1 23 80 102 80 102 0.97 2 24 0.00061 0.15 14.8 1.0 2 23 108 129 108 129 0.98 3 24 0.0081 2.1 11.2 0.2 1 23 135 157 135 157 0.98 4 24 0.0067 1.7 11.5 0.9 1 23 170 192 170 192 0.96 5 24 4.3e-05 0.011 18.4 4.6 1 23 217 239 217 239 0.98 6 24 6.2e-06 0.0016 21.0 0.1 1 23 245 267 245 267 0.97 7 24 0.0015 0.38 13.5 0.4 1 23 273 296 273 296 0.96 8 24 0.0035 0.89 12.4 1.8 1 23 306 329 306 329 0.97 9 24 1.6e-06 0.00039 22.9 0.5 1 23 412 434 412 434 0.98 10 24 5.1e-05 0.013 18.2 1.3 1 23 440 462 440 462 0.99 11 24 0.00072 0.18 14.5 1.6 1 23 468 490 468 490 0.99 12 24 0.0072 1.8 11.4 0.6 1 23 501 523 501 523 0.98 13 24 1.8e-05 0.0044 19.6 4.4 1 23 579 601 579 601 0.99 14 24 0.00016 0.041 16.6 2.4 1 23 607 629 607 629 0.98 15 24 8.1e-05 0.02 17.5 0.8 1 23 635 657 635 657 0.97 16 24 0.0012 0.3 13.9 2.3 1 23 663 685 663 685 0.98 17 24 0.27 69 6.4 1.5 3 21 998 1016 996 1017 0.94 18 24 9.2e-06 0.0023 20.5 1.6 2 23 1103 1124 1102 1124 0.98 19 24 2.9e-06 0.00074 22.1 3.9 1 23 1130 1152 1130 1152 0.98 20 24 0.02 5 10.0 4.4 1 23 1160 1182 1160 1182 0.98 21 24 0.0014 0.35 13.7 5.3 1 23 1188 1210 1188 1210 0.98 22 24 4.8e-05 0.012 18.3 5.3 1 23 1342 1364 1342 1364 0.98 23 24 0.00028 0.072 15.8 2.1 1 23 1368 1390 1368 1390 0.98 24 24 0.0016 0.4 13.5 1.7 1 22 1396 1417 1396 1417 0.96
Sequence Information
- Coding Sequence
- ATGAAAGCAACTCAAATAATTGGAGATGATAACGTTATATATACGTACCTGCCCCTTTCTTACGGTACGATTGAAGCCCCTATACAAGGTTTTCCAGTAACAGTCACTCCTAATGTGGTCGTAAAGATTGCCGGCAAAAATATACCTTTCGCGAATGCCCAACAGaatGGGGCATTAACACATTGTGCTGAGGCCGATAATTTTATGGAGAATTCAAATGTATCAAATGTGAAAAGATTTAAATGTGAGCATTGTTTTGAGAGCTATAATATTGAAGATAATTATAAGTTGCATATGGCATTACATGAGCAAAGTCAACCTACCTGTCCATTGTGTAAAAGACAGTTTCAAAGATTAGCAAGCTTGAAGTCACATTTAATGATGCATCAAGTTGAAGAGACATTTGTTTGTAAGGAATGTTTGGCAGAGTTTGAGAAGGAGgaggaatacaataaacatatgGAAAGCCATAATATAgcaaaacttaatttatttgaaaacataccttatatttgttcatattgtaattatttatttgaaaaccCCAAAGATTATAAAGAACATGTGTCTTATCATATAAAGataAAGAAATTAGTTTATAATCCAAAGAAAACTAGAAGACGTAtgacaaataataaagaatacagCCATAGGTGTTCAGTATGCAGTAAATCGtttccaaaaaattgtttattagaaCGACATATGAGGATACATAATGGTGAAAAGCCATATGCGtgTCCAAAGTGTGATAAAGCATTTGCACAGAAAGGTACTCTTCAGATACATTTGGTAAAACACTCCGGTCACAAACCATATAAATGTACTTTGTGCCCTgcagaatattttcaaaaagGGAATTTACGCGTCCACGTAGAAAAAACTCATACAGCTCCTCCAAACATCGATAAAATGTATAAGTGCACACAATGCACATGCATATTTAGGAAAATCGCATCCCTCAATGCTCATATTACAAAAGCTCAcggtgatatgaaacatattgATGAACTAACAGACTTGGATGAGAGAGTTAAAGCCTTGAGAGAGATGGCTGAGCAATTTCCCAATCCTAGCAAAGAATCTAAGGAAAATATGTCGCTGGAACATTCAAAAATTGATCCGTTAAGTACAAAACCAAACGAGACCTTCGTTAAGTTAGCCGAAAATAGTGTAGACGGTACATTAAGAAGATATGTTGTGAAGCAACGAAAAGTTGGGGATACGAAAtggtttatttgtttatattgtagCAAAGAATTTAAGAAACCGTCAGATTTAATTAGACATATTCGAATCCATACTCGAGAGAAACCCTATAAGTGTAAAACATGCAATCAAGCTTTTGCACTTAAATCAACATTATTGTCACATTTAAATACTCACGATGGTAAACGAGAATATCAATGTTTGGTATGTTTGAAGTTCTTTACCTCGGCGAGAACACTAAGTGCGCATACAAAGAAACACGGAAAATCTGGTTCtgctccaagtttgaagtataaATGTTCCACTTGTAGCAAACTTTTTGGTACACTAGCAAAGGTGAGAAATCACATGGACATACATAATTGTAATAACGATGACATCCAAAAGAATTCCCATGAAGAGGAACAGGGAAGTCAAGTTCTTTTAAGACAACCCATGATGGAAACTGAAGAAGGTTTAGTCGCTGTGCCCGCTCCGAAATCGCGAATACCGCATTCAGAAATGGAAGAATATAAAAACCGACCCTACAAATGTCACAAGTGCGGCGCTGCTTTTACGAAACCTACCCACGTCAAAAGACACATGTTGAGGCACTCGGgcgaaagaaattttaaatgcgATTTTTGCGCTAAAACATTTTTCACATCTTACGCCCTAAAGGAACACATACGGTTTCACAACCCAGAGAAAAAATTCGCGTGCACTATATGTTCTAAAAAATTCGTAGCCAAAGAATTACTAAAACGTCATCAAATCAAACATTCTTCGGTACGACCTTATATTTGTCCTTATTGCAAAAGGAGATTTAAAACGGCTCCATTATGCCGGaaacatattaatatacatCGAAACGATACGAATTTGCTTAACAGTGATTTAGACATTATAACGAATACAAATTCTACGAAGATAATCGATTTAGCAGATACATTATCGGGTAACCCTTTCGATTTAGATACACAAGTTGATGAGGACACCATATTCTTTGAAACAGAATGTGGAGAAACGTTAGTTGAACCGGAGCCAACACCGCCAattaTCGATGCTAATATAAACCAGAATCACGAAGTACTGAACCTACCTAGCAGCGCGcaaatttttctatcaaaagAAGGTCATTACACCATTATAATGCCGGaaacaaatgaaattgaaaCATACGCCATTAATACAAATCTTGGTAATACCGAACAAGGTTCAGCAGGGTTTGTGAGTTACGATGAGTATCCATCTGTTCACAGCGatgtttataatacaatattaccaAACGTAAAGTTGCAAAACAGCGATCCAATTTTAATGAGCACCATTGGTGAATCCCAAGAttctaacattttatttatggatCCGACGTTATCACAATCGTCGGAATTTCAGAACGAAACCCAAAATTTTGAACCATTCAACACAGCGATATTCAATACGCCTGTCGACTTAAACCTGAGTGCACAATCCGCCTTACAAACAAATGGTTTGATACAAAGTGACCAGacagttttatcttcaacaagAGCCGATCAATTAACGAAATCTGCTCGACTAAAATTGGGTTTCACAGATGGTACCAATTTAGGGCacgtattaaataaaaaagttactaATGTCGATACCTCAAAATTGCTTCTAGCGCCTGAACATATTGGTTTGGgcgataatttaattataacattgaACGGAGACGAACTTGCTAATATGAACTTTAGTTTAAATAACGGGGCCAATTCTACGGGGGATAATTTGAGTTTAAATATTATGGGCAGTGAAATACGAGCTGGTTATGGATGCACACTTTGCAAAGGCACCTTTAATACGGGTCACGATTTAGAGAAGCATCAATGTGTTGAAGTGTTACCGGTTGAGTTGGGTGATGAAGTTGATGATCCGATTGATCTTACTGAAAATCTGGCTGATATGCAACAAGATGAACAAATTACTCTTATAACAGATTACAATGATCAGctACAAACAACTCACATTGAGATATCAACGGATGAACCTAGTTCCGATGCGTTGTTTTTGAGAGATCCACTTAATGATAACTATTTTGAGGAAGGTAATACCGAATTTACGGTGGACAAGTCTAAAAAGTGCGAGAACAGGTGCACTTATTGCAGTAAATTGTTTAAGAAAGCTTCTGATTTGGTTAGACACATCCGAACGCATACAGGTGAGAAACCCTTCTCCTGTAACAAATGCAGTAAGAGTTTCTCACTCAAGTCCACTTTGCAATCCCACCAAAGGACGCATAGTAATAcgagaaataaagattttatttgttcGGTTTGTAACTGCAATTTTAGTTGTCGGGccacattaaaaatacatatgcgCATACATACAGGAGTAAAACCGTATGCTTGTCATATATGTCATATGAAGTTTAGAACATCGTCCTCTCGGAAATCCCATTTAGCCACACATGCTAAGCAGTCAAGAAGAAACGAATCGAAGAGCAATTCCACCAATGCCAACCCAATGAATCGCTACTTAGAAACCTTGTTGACcaatgaaacaataaatttgCAAGCGAAACTCGACGGTCCTACTACCGGTGCTGAAAATATCGAAAGTACCGAAATACAACATATAGAGGGCCTATCTATCGATTTGCTGCAACAACTCCAAAATGCCGGGTTGTTATTGCAAGAAACCAATAATGACGTACTAAACGATGGATTGATGCAACTAAACTACGATACATTAATAGTAGACGCCAAAACGTTAAAAACAGCGTCAATTCAAAATCTCAACTTTACAGACACGAATTTCCCAACTACGGTTAGGGAAGATAACGGGGATCAAACTGCAAAAAAATTCGAATGCAACTATTGCCATAAAACATATAACACAAAAGCCGTCTTGAGAAAACATCAGAAACGCCATAAAAAGGACTTCCAATGCCCCAAAtgtgataaacaatttgattcTCAGCACGTACTGGACAAACATGTGAAGTTGCATTCGGGTTACAGACCATTTTCATGTACTCATTGTACGAATAGTTTCAGTGAAGAAGGTAGTTTAAAAACCCACATGAAACGGTATGATAATTTATGTAAGATGATTTGTATCTAG
- Protein Sequence
- MKATQIIGDDNVIYTYLPLSYGTIEAPIQGFPVTVTPNVVVKIAGKNIPFANAQQNGALTHCAEADNFMENSNVSNVKRFKCEHCFESYNIEDNYKLHMALHEQSQPTCPLCKRQFQRLASLKSHLMMHQVEETFVCKECLAEFEKEEEYNKHMESHNIAKLNLFENIPYICSYCNYLFENPKDYKEHVSYHIKIKKLVYNPKKTRRRMTNNKEYSHRCSVCSKSFPKNCLLERHMRIHNGEKPYACPKCDKAFAQKGTLQIHLVKHSGHKPYKCTLCPAEYFQKGNLRVHVEKTHTAPPNIDKMYKCTQCTCIFRKIASLNAHITKAHGDMKHIDELTDLDERVKALREMAEQFPNPSKESKENMSLEHSKIDPLSTKPNETFVKLAENSVDGTLRRYVVKQRKVGDTKWFICLYCSKEFKKPSDLIRHIRIHTREKPYKCKTCNQAFALKSTLLSHLNTHDGKREYQCLVCLKFFTSARTLSAHTKKHGKSGSAPSLKYKCSTCSKLFGTLAKVRNHMDIHNCNNDDIQKNSHEEEQGSQVLLRQPMMETEEGLVAVPAPKSRIPHSEMEEYKNRPYKCHKCGAAFTKPTHVKRHMLRHSGERNFKCDFCAKTFFTSYALKEHIRFHNPEKKFACTICSKKFVAKELLKRHQIKHSSVRPYICPYCKRRFKTAPLCRKHINIHRNDTNLLNSDLDIITNTNSTKIIDLADTLSGNPFDLDTQVDEDTIFFETECGETLVEPEPTPPIIDANINQNHEVLNLPSSAQIFLSKEGHYTIIMPETNEIETYAINTNLGNTEQGSAGFVSYDEYPSVHSDVYNTILPNVKLQNSDPILMSTIGESQDSNILFMDPTLSQSSEFQNETQNFEPFNTAIFNTPVDLNLSAQSALQTNGLIQSDQTVLSSTRADQLTKSARLKLGFTDGTNLGHVLNKKVTNVDTSKLLLAPEHIGLGDNLIITLNGDELANMNFSLNNGANSTGDNLSLNIMGSEIRAGYGCTLCKGTFNTGHDLEKHQCVEVLPVELGDEVDDPIDLTENLADMQQDEQITLITDYNDQLQTTHIEISTDEPSSDALFLRDPLNDNYFEEGNTEFTVDKSKKCENRCTYCSKLFKKASDLVRHIRTHTGEKPFSCNKCSKSFSLKSTLQSHQRTHSNTRNKDFICSVCNCNFSCRATLKIHMRIHTGVKPYACHICHMKFRTSSSRKSHLATHAKQSRRNESKSNSTNANPMNRYLETLLTNETINLQAKLDGPTTGAENIESTEIQHIEGLSIDLLQQLQNAGLLLQETNNDVLNDGLMQLNYDTLIVDAKTLKTASIQNLNFTDTNFPTTVREDNGDQTAKKFECNYCHKTYNTKAVLRKHQKRHKKDFQCPKCDKQFDSQHVLDKHVKLHSGYRPFSCTHCTNSFSEEGSLKTHMKRYDNLCKMICI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -