Oere036236.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010031492.1:1-6531[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.3e-05 0.0033 20.0 1.5 1 23 19 42 19 42 0.97 2 20 0.00011 0.027 17.1 1.8 1 23 48 71 48 71 0.94 3 20 0.0057 1.4 11.7 1.1 2 23 78 99 77 99 0.96 4 20 3.5e-06 0.00088 21.8 0.4 1 23 105 128 105 128 0.96 5 20 3.5e-05 0.0089 18.7 0.5 1 23 133 155 133 155 0.97 6 20 5.2e-06 0.0013 21.3 0.8 1 23 164 186 164 186 0.98 7 20 4.2e-06 0.0011 21.6 1.3 1 23 192 214 192 214 0.96 8 20 2e-05 0.0049 19.5 0.5 1 23 220 242 220 242 0.98 9 20 2.1e-05 0.0053 19.4 3.6 1 21 248 268 248 270 0.96 10 20 2.8e-05 0.007 19.0 0.8 1 23 276 298 276 298 0.97 11 20 0.00019 0.047 16.4 2.2 1 23 323 346 323 346 0.96 12 20 0.00053 0.13 15.0 1.4 1 23 352 375 352 375 0.95 13 20 0.025 6.4 9.7 1.0 2 23 382 404 381 404 0.92 14 20 3.3e-05 0.0084 18.8 0.1 1 23 410 433 410 433 0.96 15 20 0.00081 0.2 14.4 4.5 1 23 438 460 438 460 0.97 16 20 2.3e-05 0.0059 19.2 0.2 1 23 469 491 469 491 0.98 17 20 2e-05 0.0051 19.4 0.3 1 23 497 519 497 519 0.96 18 20 2.5e-05 0.0064 19.1 0.5 1 23 525 547 525 547 0.98 19 20 0.0016 0.41 13.4 6.3 1 21 553 573 553 575 0.95 20 20 2.7e-05 0.0067 19.1 0.5 1 23 581 603 581 603 0.97
Sequence Information
- Coding Sequence
- TTGTCCGGCATCAAAGAAGAAGCCGGTGATGGCAGCGTGGCGATTTTGAAGATTTATCCTTGCGATGTTTGCTCTAAAACTTTTAGTAAGAAGTACAATCGGACTCGTCACGTAAGGTTAGTGCATGAGATGAAACCTCCCTTTGCCTGCGATATTTGTGAGAGATCGTTTAAGCAGAAGTGTTACTTGGAGGCTCACAAAACTATGGTACACGATAAAACCAGTGATATCTCCTGTGATATCTGTGGCAAGCAATTCCTCTTCAAATGCGTCTTAAGGCGACACATGGCGGTACACACGAAAGATTACAAGTACAAATGCGACCAATGCGGGAAGGGTTTCAGCTTTCCTTCTGCTTTTAAATCGCACCAAGACATCGAACACAATGGTCTCCGATTTACGTGcggtaaatgtaataaaatttttcgagATCCTGTTGCATACAAGAACCATCTCCTCCAGCACGAGCCGAATTATATTCGTAGGAAATACACGTGTTCCTTGTGTCCCAAGACTTTCAAAGGCACGTCCGGGTTACGGAATCACTTGAAGATACACCGAGGCGAAGGTAAGCACTTCTGTGAGACTTGCGGAAAGATGTATACCACCAAATACGGATTAATCGACCACATTCGTGTCCATACCGGTGAAAAGCCgtacgtttgcgacacttgtggcaaggcatTTAGTAGTAAAAAGTATATTAAGGACCACGTATTGAGCCACACTAAGGAGAAGCCTTACAAGTGCGATGTTTGCGCAAAACGCTTTTCGCAAAGGTCGACTCTTAGAATCCACATGCGCTGCCACAGTGGGGAGAGACCTTACGCGTGTGAGTTTTGCGAGAAGAGATTTATTACGAAGGGACAGTTGAATAACCACGGAAAAAGCCATGGCATCATCATTCTAAAGTTGTCTGACAACGAAGAAGGAGCCGGTGATGGTGGCGTGACGATTTTGAAGATTTATCCTTGCGATGTTTGCTCTAAAACTTTTAGTAAGAAGTATTATCGGACTCGTCACGTAAAGTTAATGCATGGGATGAAACTTCCCTTTGCCTGCGATATTTGTGAGAGATCGTTTCAGCAGAAGTGTTATTTGGAGGCTCACAAAAGTATGGTACacgataaaactaataatatctcCTGTGATATCTGTGGCAAGCAATTCCTCTTCAAATGCTTCTTAACACAACACATGGCGGCGGTACACACCAAAGATTATAAGTACAAATGCGACCGATGCGAGAAGGGTTTCAGCGTTGCATCTGCTTTGAAGTCGCACCAAGACATCGCACACAACGGTCTCCGATTTACGTGCGATAAATGTCATAAACTTTTTCGAGATCGTGGCACATACAAAAACCATCTCCTCCAACACGAGCCGAATTATATTCGTAGGAAATACACGTGTTCCTTGTGTCCCAAGACTTTCAAAGGCCCGGCGGGGTTACGGAATCACTCCATGATGCACCGAGGCGAAGGTAAGCACATCTGTGAGACTTGCGGAAAGATTTATACTACCAAACCCGGACTAACCGACCACATTCGTGGTCATACCGGTGAAAAGCCGtacgtttgtgacacttgtgggaggGCATTTAGTAGCAAGAGGTATATTAAGGAGCACGTATTGACCCACACTAAGGAGAAACCTCACAAGTGCGATGTTTGCGCAAAATGCTTTGCGCAAAGGTCGACTCTTAGAATCCACTTGCGTTGCCATAGTGAGGAGAGACCTTATGCGTGTGAACTTTGCGAGAAGAGATTTATTACGAAGGGGCTGTTGAATAACCACAGAAAAGGCCATGGCGTCATTCTAAAGTAA
- Protein Sequence
- LSGIKEEAGDGSVAILKIYPCDVCSKTFSKKYNRTRHVRLVHEMKPPFACDICERSFKQKCYLEAHKTMVHDKTSDISCDICGKQFLFKCVLRRHMAVHTKDYKYKCDQCGKGFSFPSAFKSHQDIEHNGLRFTCGKCNKIFRDPVAYKNHLLQHEPNYIRRKYTCSLCPKTFKGTSGLRNHLKIHRGEGKHFCETCGKMYTTKYGLIDHIRVHTGEKPYVCDTCGKAFSSKKYIKDHVLSHTKEKPYKCDVCAKRFSQRSTLRIHMRCHSGERPYACEFCEKRFITKGQLNNHGKSHGIIILKLSDNEEGAGDGGVTILKIYPCDVCSKTFSKKYYRTRHVKLMHGMKLPFACDICERSFQQKCYLEAHKSMVHDKTNNISCDICGKQFLFKCFLTQHMAAVHTKDYKYKCDRCEKGFSVASALKSHQDIAHNGLRFTCDKCHKLFRDRGTYKNHLLQHEPNYIRRKYTCSLCPKTFKGPAGLRNHSMMHRGEGKHICETCGKIYTTKPGLTDHIRGHTGEKPYVCDTCGRAFSSKRYIKEHVLTHTKEKPHKCDVCAKCFAQRSTLRIHLRCHSEERPYACELCEKRFITKGLLNNHRKGHGVILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -