Basic Information

Insect: Osmoderma eremita
Gene Symbol: -
Assembly: GCA_031763485.1
Location: JARFOC010110740.1:1006-6384[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.004 1 12.2 0.4 2 23 22 44 21 44 0.97

2 19 5.4e-06 0.0014 21.2 0.8 1 23 50 73 50 73 0.95

3 19 0.00029 0.074 15.8 0.8 1 23 79 101 79 101 0.97

4 19 8.2e-06 0.0021 20.7 2.2 1 23 107 129 107 129 0.98

5 19 7.2e-05 0.018 17.7 0.8 1 23 135 157 135 157 0.95

6 19 1.8e-06 0.00045 22.8 2.4 1 23 166 188 166 188 0.98

7 19 9.5e-08 2.4e-05 26.8 0.6 1 23 195 217 195 217 0.99

8 19 2.1e-05 0.0053 19.4 0.2 1 23 223 245 223 245 0.97

9 19 7.3e-07 0.00018 24.0 1.0 1 23 251 273 251 273 0.97

10 19 3.7e-06 0.00093 21.8 1.2 1 23 279 301 279 301 0.98

11 19 1.2e-05 0.0029 20.2 0.9 1 23 315 338 315 338 0.95

12 19 0.00051 0.13 15.0 0.7 1 23 344 366 344 366 0.96

13 19 0.0021 0.52 13.1 1.1 1 23 372 394 372 395 0.95

14 19 8.3e-06 0.0021 20.6 1.6 1 23 400 422 400 422 0.98

15 19 0.0086 2.2 11.2 2.2 1 23 431 453 431 453 0.97

16 19 0.00013 0.032 16.9 0.0 2 23 461 482 461 482 0.97

17 19 5.8e-05 0.015 18.0 0.6 1 23 488 510 488 510 0.96

18 19 2.8e-05 0.007 19.0 7.6 1 23 516 538 516 538 0.98

19 19 2.3e-06 0.00058 22.4 1.8 1 23 544 566 544 566 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.004	1	12.2	0.4	2	23	22	44	21	44	0.97
2	19	5.4e-06	0.0014	21.2	0.8	1	23	50	73	50	73	0.95
3	19	0.00029	0.074	15.8	0.8	1	23	79	101	79	101	0.97
4	19	8.2e-06	0.0021	20.7	2.2	1	23	107	129	107	129	0.98
5	19	7.2e-05	0.018	17.7	0.8	1	23	135	157	135	157	0.95
6	19	1.8e-06	0.00045	22.8	2.4	1	23	166	188	166	188	0.98
7	19	9.5e-08	2.4e-05	26.8	0.6	1	23	195	217	195	217	0.99
8	19	2.1e-05	0.0053	19.4	0.2	1	23	223	245	223	245	0.97
9	19	7.3e-07	0.00018	24.0	1.0	1	23	251	273	251	273	0.97
10	19	3.7e-06	0.00093	21.8	1.2	1	23	279	301	279	301	0.98
11	19	1.2e-05	0.0029	20.2	0.9	1	23	315	338	315	338	0.95
12	19	0.00051	0.13	15.0	0.7	1	23	344	366	344	366	0.96
13	19	0.0021	0.52	13.1	1.1	1	23	372	394	372	395	0.95
14	19	8.3e-06	0.0021	20.6	1.6	1	23	400	422	400	422	0.98
15	19	0.0086	2.2	11.2	2.2	1	23	431	453	431	453	0.97
16	19	0.00013	0.032	16.9	0.0	2	23	461	482	461	482	0.97
17	19	5.8e-05	0.015	18.0	0.6	1	23	488	510	488	510	0.96
18	19	2.8e-05	0.007	19.0	7.6	1	23	516	538	516	538	0.98
19	19	2.3e-06	0.00058	22.4	1.8	1	23	544	566	544	566	0.99

Sequence Information

Coding Sequence: ATGGAAAATCATCGCGATCGCGGGAACGAATGTTCACGAATACAGTTGTGGAACGTAAGCAAACGCTGCGAGATTTGTTCGAAATTCTTCGTCAGTGGAGAGGCGTTTGCACTGCACAGGAGAAAAGTTCATCCAGGTAAAGACGGTTTCAAATGCGACATATGCGGAAAGTCGTTTAAAGGTTGGCAACATCTGGAGGGTCACAAGAAAGGTGTCCACGAGAAACATCCCGAGTACACGTGCGATATTTGTGATAAATGGTTTACGAATAAGAGCTGGGTAACCACGCACAAGGCTAAACATATGAAGGATTTCAAGTTTCAGTGTGAAAAGTGCGATATGGGATTTGTGCAAAAGCGCGATCTCAGACACCACCTGATGTCACACGATGCGGATCCATATTTTAGGTGTGAGAAGTGTGGTAGGGGCTTCAAGGACGAACGTTACTTTAAGAATCACGTGGCGGCGCACGATGCGAATTACGTAAGAAAGGAATACGTTTGCGAGGTATGCTCGAAGAGTTTCACGACCAAGAAATACTTGGTCAAGCATACTAAATCGCACGATGGGATTTGGTCTAGTTATGTGTGCGAGATTTGCGGTAAAACTGTCACAAGCCGCTCGTCCTTGAAAATACATAGGAGAACTCATACGGGCGAGAAACCGTTCGCCTGCGATACTTGTGGTAAGGGTTTCATAAGCACTAATTTACTCAAACTGCATCTGCGGGTTCACACGAAACAGAAACCCCACGAGTGTCAGATTTGTGGGAAAGGATTCTCGCAGAAACCCTCGCTAACGATACATTTACGGTACCATACCGGCGAGAGGCCCTACAAGTGCGATATTTGCACGAAAAAATTCATCAGTAAATCATTGTTGAATATCCATTCCAAGGTTCACGGTACAACATTGAAgcTATCCAAAACAGAAGATGAACGTTTCCCTTGTGAATTATGCGGAAAATCGTACAAGTCTCGCAATTATCTGGAAAATCACAAGCGAGGCCAACACTACGGCGTTGCCAAGTACGCGTGCGAGTACTGCGGTAAGGTGTGCATAACCTCGCACGCTGTAGCGGCCCACCGAGTCCGCCATACTCGAGAATATAAGCATAAATGTGAGATGTGCGACGACGGCTTCTTCACACCTGGAGCTTTGAGCAGACACATCACTATACATCACAGTAATGTCCGTTATACCTGCGAGAAGTGCAATAAGATTTTCAAAAACGCCACCTACTTCAAAATCCACATCGCCAAGCACGAACCGAACTACGTCCACATGGAGTACCCTTGCGGGGTGTGTTCGAAGGTGTACCATCACGAGAGGTCTTACGCGCGGCACGTCAAAGAACACTTAGGTGCGATTACCAGGCCTGTTTGTGAGATTTGCGGAAGGGTATTCAGTAGCGGTGCGTATCTGGACGAACACAGACGGATCCATACCGGCGAGAAGCCTTTCGCCTGTGACACTTGCGGGAAACGTTTCAACAGCAAGAAACGTCTTGCCGTACACACTCTAATCCACACCAAACAAAAACCGCATCGGTGTCTAGAGTGCGGGAAGTGTTTCTCGCAGAGGTGTACTCTCACGATACATATTCGGTCTCACACTGGTGAGCGGCCTTATCAATGTTCGATTTGCCAAAAGAAATTTGTGAGCAGAtctcttttaaatattcattcgAGAAAGCATGGGAAAGCTTTTTAG
Protein Sequence: MENHRDRGNECSRIQLWNVSKRCEICSKFFVSGEAFALHRRKVHPGKDGFKCDICGKSFKGWQHLEGHKKGVHEKHPEYTCDICDKWFTNKSWVTTHKAKHMKDFKFQCEKCDMGFVQKRDLRHHLMSHDADPYFRCEKCGRGFKDERYFKNHVAAHDANYVRKEYVCEVCSKSFTTKKYLVKHTKSHDGIWSSYVCEICGKTVTSRSSLKIHRRTHTGEKPFACDTCGKGFISTNLLKLHLRVHTKQKPHECQICGKGFSQKPSLTIHLRYHTGERPYKCDICTKKFISKSLLNIHSKVHGTTLKLSKTEDERFPCELCGKSYKSRNYLENHKRGQHYGVAKYACEYCGKVCITSHAVAAHRVRHTREYKHKCEMCDDGFFTPGALSRHITIHHSNVRYTCEKCNKIFKNATYFKIHIAKHEPNYVHMEYPCGVCSKVYHHERSYARHVKEHLGAITRPVCEICGRVFSSGAYLDEHRRIHTGEKPFACDTCGKRFNSKKRLAVHTLIHTKQKPHRCLECGKCFSQRCTLTIHIRSHTGERPYQCSICQKKFVSRSLLNIHSRKHGKAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -