Basic Information

Gene Symbol
zfy1
Assembly
GCA_031763485.1
Location
JARFOC010031956.1:510-7022[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 2.1e-06 0.00052 22.5 0.2 1 23 10 32 10 32 0.98
2 26 2.7e-08 6.8e-06 28.5 0.3 1 23 38 60 38 60 0.98
3 26 1e-06 0.00025 23.5 0.2 1 23 66 88 66 88 0.98
4 26 1.4e-06 0.00035 23.1 0.8 1 23 94 116 94 116 0.98
5 26 0.071 18 8.3 2.3 3 23 136 157 134 157 0.95
6 26 0.094 24 7.9 0.3 1 23 177 199 177 199 0.98
7 26 0.14 35 7.4 1.0 1 23 203 225 203 225 0.97
8 26 0.0027 0.68 12.7 0.2 1 23 231 254 231 254 0.98
9 26 0.045 11 8.9 1.0 1 23 260 282 260 282 0.80
10 26 0.21 52 6.8 0.5 3 23 290 311 288 311 0.91
11 26 2.4e-05 0.0061 19.2 3.3 1 23 324 346 324 346 0.99
12 26 0.0005 0.13 15.1 3.4 3 21 357 375 355 377 0.92
13 26 7.8e-06 0.002 20.7 1.1 1 23 383 405 383 405 0.98
14 26 4.5e-06 0.0011 21.5 3.8 1 21 411 431 411 433 0.96
15 26 0.0017 0.42 13.4 0.0 1 22 439 460 439 460 0.94
16 26 0.011 2.7 10.8 5.0 3 23 489 510 487 510 0.96
17 26 1.8 4.6e+02 3.9 0.3 1 23 530 552 530 552 0.93
18 26 0.19 47 7.0 0.5 1 23 556 578 556 578 0.94
19 26 1.7 4.3e+02 3.9 0.3 1 23 584 607 584 607 0.86
20 26 0.00061 0.15 14.8 2.4 1 23 613 635 613 635 0.98
21 26 0.0033 0.84 12.5 0.1 2 23 642 664 641 664 0.94
22 26 7.4e-06 0.0019 20.8 0.5 2 23 676 697 675 697 0.98
23 26 0.0016 0.41 13.4 6.7 3 23 707 727 705 727 0.95
24 26 4.5e-07 0.00011 24.6 1.1 1 23 733 755 733 755 0.99
25 26 0.00011 0.027 17.2 5.8 1 21 761 781 761 783 0.96
26 26 8.9e-05 0.022 17.4 0.0 1 20 789 808 789 810 0.95

Sequence Information

Coding Sequence
gtgcggacacatactggagaaaaaccgttcgtttgcgacacttgtggaaaggctttcacccggaaGACAGAAATTGCGAggcatgtacggatacatactggagaagagccgttcgtttgcgacacttgtggaaaagctTTCACCCGCAAAGACAATCTTCAGATACATGTACGGATTCATACTGGAGAAGAGCccttcgtttgcgacacttgtggaaaagctTTCACCCTCAAAGGAAGTCTTCagatacatgtgcggacacatactggagaaaaaccgttcgtttgcgatacttgtgggaATACTTTTATCACCAAATCACTTCTTAAGCTGCATCTTCGCACACATACCAAGACCATCTTCGTTGCTGGCGATAATGTTTGCCCCCTAAAGAAACCCTGGTTTTGCAAAACCTGCCAGACCTATTTCAACAGCAGACGCGCCCTTTACGAACACAAAAAATCCACGCACGATCAGATGCCCAAAAAGCGCCGCTTCAACTATACCTTCAACGAAGACACCGAGACATTCAAGTGCAAGATATGCAAACTGGAGTCTAAGGTTAAAGAATTGATGGACGTGCACGTTTTAACGCACGAGGAGAAATACAGTTGCGAAGTTTGCGATGCTACAGTGCACTCGGCTTATAAGTATTCGGTTCATCTTTACAAGCATAATACGGAAGCTGGGTATAAGTGCCCTTTGTGCAGTTACCAAACGCCTAGGCAATCTAGTATTTTGATACATATTAATAGAATACACTTGAGACGTTTCGcgtatatttgcaaatattgcGGGAAAGGTTTTGATGACGTTGTAATGCATAAGGAACACGAGAATTCCCATATCCATTCCCAAACGATATCTTGTATTGTGTGCAAGAAAGAGTTTTCCTTCACTAGATACTTGGTGCTGCACCAAATACGTTATCACACGGTGTCCACCATAGATCCggtattgcaaaatatttaccaaTGCCCCATCTGCCATAAGAATTTCGCCACTAAGCATATCTTAAACAACCACCTGCGAATACATCGGAAGAATGACAATGTTCAGACGCACTTGTGCGAATGGTGTGGCAAAAGCTTCAAAGAGAAATACTCTTTGAAGGAGCACATTATGTGCCACACTGGAAAGAAACCGCATAAGTGCAGCTACTGCGGTAAAGCCTTTGCTAGGAAGGGCTTTCTAGTACTCCACGAAAGAATACATAGTGGGGAGAAACCCTACACTTGTGTTCACTGCGGAAAATCATTTAATCAACCAACTGCACTGAAGAGACACATACGCTGCCATACGGGTGAGAGACCCTACGTTTGTGAGAACTGCGGAGCGAGTTTCACCACAAAGTTGCCATTGGATAAGCACATAATCActcgttgtggagtttctaaACACAGCAACCGCTCAAAAATCTCAACCAATCGTCCGAAGAGAATAAGACGAGGCCCACCGTGGTTTTGCGATAAATGTCGCACGAATTTCAAAAACAGGCGAACGCTGTGCGATCACAGGAAAACAGCGCATCTCCAATTATCCAAGGAATACCTCTCCAATTACGTTTTCGACGAAAACAGCAAAATGTTCTCctgtaaaatatgcaaattccAAGCCGCCCATGCAATAGGAATAGAGACCCACGTCTTGACACACGAACAAAAGTTTGCATGCGAAGTTTGCGACGCAACCGTGTATTCCGCTTATAAATACTGCGTACATCTTTACGAACACGATAAGGAGGCCGGATTTAAGTGTCCCCTATGCGATTTTAGGAAAGATGTATCGTATCCGGTAATGAGACACATTAACAGGGCTCATCTGGATCGTTTCActtacaaatgcaaatattgCGGGAAGGGTTTTCACGATATCGAAATGTACAAAGACCACGAGAATTCTCACGTGACTACGCAGGTTATTTCGTGCGTAGTTTGCGGGAAGGAATACCCTTATAGGAGGTATTTGGTCAACCACCAATTGAACGCGCACAGAGTCTTTACCATCGATCCAAGATTGGAGAACCAGTGCTATGTTTGCAATAAGGGTTTCGAACGGAAACGCTTACTTGAGGTACACATGAGAATTCATCAAAAGGACCTCCTACCTTTACATTTGTGCGAACAATGCGGTAGGAGTTTTAAATCGAAATGTTCTTTAAGATCACACAGTAAGAGCCATTCTGAAGACAAACCTTATAAGTGCAGTTATTGCGATAAGGGATTCACTCGGAGATCTTTTCTCATAGCTCACGAAAGAGTACACAGTGGCGAAAGGCCGTACACTTGCAATCAGTGTGGGAAATGTTTTAGCCAGCGGACACCGTTGCTAAGGCATATACGTTGTCATACCGGTGAAAGACCGTACGTCTGTGAACGTTGCGGTGTCAGCTTCACTACGAAGATGGCATTGAAGAAACATGTGATTGCAACACGTTGTGGCTGA
Protein Sequence
VRTHTGEKPFVCDTCGKAFTRKTEIARHVRIHTGEEPFVCDTCGKAFTRKDNLQIHVRIHTGEEPFVCDTCGKAFTLKGSLQIHVRTHTGEKPFVCDTCGNTFITKSLLKLHLRTHTKTIFVAGDNVCPLKKPWFCKTCQTYFNSRRALYEHKKSTHDQMPKKRRFNYTFNEDTETFKCKICKLESKVKELMDVHVLTHEEKYSCEVCDATVHSAYKYSVHLYKHNTEAGYKCPLCSYQTPRQSSILIHINRIHLRRFAYICKYCGKGFDDVVMHKEHENSHIHSQTISCIVCKKEFSFTRYLVLHQIRYHTVSTIDPVLQNIYQCPICHKNFATKHILNNHLRIHRKNDNVQTHLCEWCGKSFKEKYSLKEHIMCHTGKKPHKCSYCGKAFARKGFLVLHERIHSGEKPYTCVHCGKSFNQPTALKRHIRCHTGERPYVCENCGASFTTKLPLDKHIITRCGVSKHSNRSKISTNRPKRIRRGPPWFCDKCRTNFKNRRTLCDHRKTAHLQLSKEYLSNYVFDENSKMFSCKICKFQAAHAIGIETHVLTHEQKFACEVCDATVYSAYKYCVHLYEHDKEAGFKCPLCDFRKDVSYPVMRHINRAHLDRFTYKCKYCGKGFHDIEMYKDHENSHVTTQVISCVVCGKEYPYRRYLVNHQLNAHRVFTIDPRLENQCYVCNKGFERKRLLEVHMRIHQKDLLPLHLCEQCGRSFKSKCSLRSHSKSHSEDKPYKCSYCDKGFTRRSFLIAHERVHSGERPYTCNQCGKCFSQRTPLLRHIRCHTGERPYVCERCGVSFTTKMALKKHVIATRCG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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