Oere000210.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010000018.1:72791-80071[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.0047 1.2 12.0 0.7 1 21 148 168 148 171 0.89 2 31 0.0033 0.83 12.5 0.2 1 23 176 199 176 199 0.90 3 31 0.022 5.5 9.9 0.6 1 23 206 228 206 228 0.97 4 31 7.3e-05 0.018 17.7 0.9 1 23 234 256 234 256 0.98 5 31 0.0041 1 12.2 0.5 1 23 262 285 262 285 0.95 6 31 6.7e-05 0.017 17.8 3.5 2 23 297 318 297 318 0.97 7 31 0.00049 0.12 15.1 1.4 3 23 326 346 325 346 0.98 8 31 8.7e-05 0.022 17.4 2.7 1 23 352 374 352 374 0.98 9 31 1.3e-05 0.0032 20.1 1.9 1 23 380 402 380 402 0.98 10 31 0.0024 0.61 12.9 0.1 1 22 408 429 408 429 0.96 11 31 0.098 25 7.8 0.2 2 23 450 472 449 472 0.94 12 31 0.15 37 7.3 0.2 1 23 492 514 492 514 0.98 13 31 0.0012 0.31 13.8 0.7 1 23 518 541 518 541 0.96 14 31 0.025 6.2 9.7 0.2 1 23 546 569 546 569 0.96 15 31 0.039 9.9 9.1 3.0 1 23 575 597 575 597 0.96 16 31 0.0013 0.33 13.7 0.4 2 23 604 626 603 626 0.93 17 31 1.7e-05 0.0043 19.7 1.3 2 23 638 659 637 659 0.97 18 31 9.7e-05 0.025 17.3 1.8 3 23 671 691 669 691 0.96 19 31 2.3e-05 0.0058 19.3 4.2 1 23 697 719 697 719 0.98 20 31 0.00075 0.19 14.5 3.8 1 23 725 747 725 747 0.97 21 31 0.00028 0.071 15.8 1.9 2 23 789 811 788 811 0.94 22 31 0.0014 0.36 13.6 0.6 1 23 831 853 831 853 0.98 23 31 0.0049 1.2 11.9 2.3 1 23 857 879 857 879 0.99 24 31 0.019 4.8 10.1 4.3 1 23 885 908 885 908 0.97 25 31 0.048 12 8.8 0.4 1 23 914 936 914 936 0.83 26 31 0.061 15 8.5 1.1 2 23 943 965 942 965 0.91 27 31 2.1e-05 0.0054 19.4 1.2 2 23 977 998 977 998 0.97 28 31 0.0001 0.026 17.2 0.7 3 23 1010 1030 1008 1030 0.96 29 31 3.4e-05 0.0086 18.7 3.5 1 23 1036 1058 1036 1058 0.98 30 31 0.00013 0.032 16.9 1.1 3 23 1066 1086 1064 1086 0.97 31 31 0.0061 1.5 11.6 0.0 1 21 1092 1112 1092 1113 0.95
Sequence Information
- Coding Sequence
- ATGTGTTATATCTCTTCTATTTTTAGGTCTCGCAAACCGCTGAAGTTAACCCTAAAGAAAAGCAGCATTCTAAACACGAACTGGAACAAGAAGTTGCCAGAAATTGACATAATTCCGTTGGAGAACGTTAAACTGGAACCAAATTTCGATCACAGCGAAGCAGATGATAGCTCTGAAGAAGAACCGTTAAGTAATAAATTGAAAAGGCAGAAGAAACGCAAAGCCCCAATCGGATACGTCAATCCTTTCAATTACTCCAATTTGAAGACGAAAAATATTCCGAAGAGGAACAGGCAGCAGGAACATACGAACAAGAAATGGACTTGTATTATATGTGGTGATATAGAGGCCGATAAAGAAGCTTTAATAAACCATTACGAGGTGCACAGGATTAATAAGGAGACTAAAGTCATGGAGACGTACGAACAAGATACTGAGTACTTCAACTGCGCAATTTGCGGACAAGAATTTACTTCTTTGAAGACCTACGAAAGGCATTTCGATGCTAAGCACGGCGAGAGAAAATATACGTGTTTTGTGTGCGAAAAAGTGTATAAGGACGCTTTTCAATTAGCTATACACAATTATATTGCTCACCCCAAAGAGTACGACGCTTATCAATGCGCCTCATGCGATTTCAAAACTGCTTTTAGGGCAAATCTAAAAGAACACTTGCTCCAACATGAGGCTTCGTGCAAATTTAAGTGCGAGATTTGCGGTAAAGGATTCGAGAATGAAAATCACTACGAGGAACACAAGATAATGCATGGTAATACCGCTTCGTTTTCCTGCGACGTTTGCGGTGAAACTTTCCCATACACCCAACGCCTAATCAATCATAAGAAGGAGTCTCATCCGGAAATATTCGGCGACAATTTAAACCAGAACGAGTGCCACGTGTGCAATAAGAAATTCGCCCACAAGAAGAGTTTGATCCTGCACATACGCGGTCATACGGGCGAAGATTCGGTTCTGTGTGACATGTGTGGGAAACGCTTAACCAGTGGGGAGCATCTAAAACAGCATTTACGGATCCATACCGGTTTTAAGCCGCATAAATGTGCCGTTTGCGGCAAAGGCTTTGCCAAAAAGTGTAACCTGACCCTTCACGAAAGGGTCCACAGTGGTGAGAAGCCGTACAAATGCAGGGTGTGTTCGAAATCTTTCTCGCAGCGCTCGACTTTGGTGATTCACGAAAGATATCACAGTGGTGAAAGGCCGTACGTCTGCACCCTGTGCAATAAGGGTTTCGTAGCTAAGGGACTGCTCAGCGTTCATCTGAAAACCTGCAGTGCTATACCAGaagaatatttGAAACGGAAAAACCAAATCAGAATACATGTGTGGCGGTGTGGAATTTGTAGAGAAGAATTCCCAGCCAGACGATACCTTAATCAACATGCCAAACTATTCCATAGCAAAACTTCAGAGGAAATCCATTACAATTACGTCTACAATGACAAGGAGAAGACCTTCTCCTGTAAAACTTGCGACGTCGAGATGAGATCGAAAGAAGATATCGCGAAACATGTCCTGACCCACGAGGAAAAGTACGAATGTGTCAATTGCAAGGAGGTTTTCTATTCGGCTTATCAATTCTCTGTGCATATGGTAAGAAAACATGGTGGCGATGTATTTATGTGTCCTCTGTGTAAATATACGACGCGAAGGGTCACATCTATAGCGCAACATATAAATATTGCGCACCTGAACAGGTACTTGCATCATTGCAAGTTTTGCGGAAAGGGTTTCCAAGATATAGCGACCTTTAGGGAGCACGAGAATATACATTTAGGTGTCGATCCGTTAATATGCGTGGTCTGCAATAAACGATTCGCCTACTCCAGAAATCTATTGATGCATCAAGTGAGAACACACAAAGTTACCATCCTAGGCGTCACTATGACGAATCAATGCGGTATTTGCAAGCGCACTTTCTTTCGGCCCAATACCCTCGAGAGACACATGAAGTTACACGAACGCAAGAAACCCATACAAAAGACTCACCTTTGTGACACGTGTGGAAAGGGTTTTGCCAGGAAGAACAAGTTAATGTTGCACTATAGGGTCCATACTGGATATAAACCTCACAAGTGCAGTTACTGCGAGAAATCCTTCACCAAGAAGGACTATTTGGTCCTGCACGAACGCACACATAGCGGCGAGAAACCCTACTGTTGCGTCTTCTGCGGAAAATGCTTTAATCAAGATGTTTCGTTGAGGATCCACTTGAGAGGTCATACCGGTGAGAAGCCGTACGTTTGCGAATTTTGTAGTACTGGTTACGTGCGACGAAAAAGACGCTACAATACTGGCAAAAATTACGAGAAGAATACCATATATGAATCCGGGAGGAGAATTTGGACTTGTAAGATTTGTGACGAGGAATTTGATAATCGAAAATCACTCACTCATCATAGAAATGAAACGCACCTCCATTCGTTCAGGGAAATCCACTACAAGTACTTGTACAACAAGCAAGATGGTGTGTACACTTGCAAAACTTGTGACATTGAGTTGACGACGAAGGAAGAGATGGAAAAACATTTGACAAGTCACGAAGAGACCTATAGTTGTTCAGAATGTTCCGAAATATTTCATTCGGTGCAAAAATTGTCTTTACATATGAGAAAGCATTTTGATGACGACATCCACCGATGCCCCTTGTGCAAATATACCACACCCAGGAGGAGTTGCATGTCCATACATATTAACACGACGCATTTGAagaaatatctatattattgcCAGTATTGCGGTAAGGGATTTCAAGATCCCTTGATATACAAGGAGCATGAGAATATACACGTCGGCGGAGATCCCGTAAAATGCATAGTATgccaaagaaaattttctttcacCAGAAACCTGATCATGCATCAGATCCGAAATCATAAAGTCAGTATACTGGGCGTCCAATTGAAAAACGAATGTCCAGTATGCAGGAAAACCTACTCGAAGACTTCGACGCTCGAAAATCACATGAAATCGCACGATAAAAGCAGACCAAAACCGAAAACACATCTCTGCGACACCTGCGGGAAAGGATTCGCCCAAAAGGCGAAGCTCGTCCTTCATTATAGGGTCCATACTGGATATAAACCGCACAAATGTAGTTATTGCGAGAAATCCTTTACGAAAAAAGATTATTTGGTGATGCACGAACGTATACACAGCGGTGAAAAACCTTATGGTTGCGAATTTTGCGGAAAATGTTTCAATCAAGATGCTTCGTTGAGGATACATTTGCGCGGGCATACAGGTGAACGTCCATATGTTTGCCAGATATGCCAAAACGGATTTGTTTCTAGAGCCGCGctgaaaatacatttgaataatTGTTCTGGTAGTTGA
- Protein Sequence
- MCYISSIFRSRKPLKLTLKKSSILNTNWNKKLPEIDIIPLENVKLEPNFDHSEADDSSEEEPLSNKLKRQKKRKAPIGYVNPFNYSNLKTKNIPKRNRQQEHTNKKWTCIICGDIEADKEALINHYEVHRINKETKVMETYEQDTEYFNCAICGQEFTSLKTYERHFDAKHGERKYTCFVCEKVYKDAFQLAIHNYIAHPKEYDAYQCASCDFKTAFRANLKEHLLQHEASCKFKCEICGKGFENENHYEEHKIMHGNTASFSCDVCGETFPYTQRLINHKKESHPEIFGDNLNQNECHVCNKKFAHKKSLILHIRGHTGEDSVLCDMCGKRLTSGEHLKQHLRIHTGFKPHKCAVCGKGFAKKCNLTLHERVHSGEKPYKCRVCSKSFSQRSTLVIHERYHSGERPYVCTLCNKGFVAKGLLSVHLKTCSAIPEEYLKRKNQIRIHVWRCGICREEFPARRYLNQHAKLFHSKTSEEIHYNYVYNDKEKTFSCKTCDVEMRSKEDIAKHVLTHEEKYECVNCKEVFYSAYQFSVHMVRKHGGDVFMCPLCKYTTRRVTSIAQHINIAHLNRYLHHCKFCGKGFQDIATFREHENIHLGVDPLICVVCNKRFAYSRNLLMHQVRTHKVTILGVTMTNQCGICKRTFFRPNTLERHMKLHERKKPIQKTHLCDTCGKGFARKNKLMLHYRVHTGYKPHKCSYCEKSFTKKDYLVLHERTHSGEKPYCCVFCGKCFNQDVSLRIHLRGHTGEKPYVCEFCSTGYVRRKRRYNTGKNYEKNTIYESGRRIWTCKICDEEFDNRKSLTHHRNETHLHSFREIHYKYLYNKQDGVYTCKTCDIELTTKEEMEKHLTSHEETYSCSECSEIFHSVQKLSLHMRKHFDDDIHRCPLCKYTTPRRSCMSIHINTTHLKKYLYYCQYCGKGFQDPLIYKEHENIHVGGDPVKCIVCQRKFSFTRNLIMHQIRNHKVSILGVQLKNECPVCRKTYSKTSTLENHMKSHDKSRPKPKTHLCDTCGKGFAQKAKLVLHYRVHTGYKPHKCSYCEKSFTKKDYLVMHERIHSGEKPYGCEFCGKCFNQDASLRIHLRGHTGERPYVCQICQNGFVSRAALKIHLNNCSGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -