Basic Information

Insect: Osmoderma eremita
Gene Symbol: -
Assembly: GCA_031763485.1
Location: JARFOC010034180.1:1-5539[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 1.5 3.9e+02 4.1 0.6 1 20 43 62 43 64 0.91

2 25 1e-05 0.0025 20.4 0.7 1 23 102 125 102 125 0.98

3 25 3.5e-07 8.9e-05 25.0 0.3 1 23 131 154 131 154 0.96

4 25 0.0069 1.7 11.5 0.2 2 23 161 182 160 182 0.96

5 25 1.8e-05 0.0046 19.6 0.2 1 23 188 211 188 211 0.98

6 25 4.1e-06 0.001 21.6 4.6 1 23 216 238 216 238 0.99

7 25 0.00075 0.19 14.5 1.6 1 23 247 269 247 269 0.97

8 25 0.0002 0.05 16.3 0.2 1 23 312 335 312 335 0.98

9 25 6.1e-06 0.0015 21.1 0.8 1 23 341 364 341 364 0.93

10 25 0.0064 1.6 11.6 0.3 2 23 371 392 370 392 0.96

11 25 9.8e-05 0.025 17.3 0.7 1 23 398 421 398 421 0.97

12 25 3.9e-05 0.0098 18.5 2.3 1 23 426 448 426 448 0.98

13 25 1e-06 0.00026 23.5 1.3 1 23 462 485 462 485 0.97

14 25 0.0065 1.6 11.5 0.2 2 23 492 513 491 513 0.96

15 25 3.7e-05 0.0093 18.6 0.2 1 23 519 542 519 542 0.97

16 25 6.4e-06 0.0016 21.0 2.7 1 23 547 569 547 569 0.98

17 25 1e-06 0.00026 23.5 1.3 1 23 583 606 583 606 0.97

18 25 0.0065 1.6 11.5 0.2 2 23 613 634 612 634 0.96

19 25 7.9e-05 0.02 17.6 0.1 1 23 640 663 640 663 0.96

20 25 0.00015 0.038 16.7 4.4 1 23 668 690 668 690 0.99

21 25 9.9e-06 0.0025 20.4 0.8 1 23 718 741 718 741 0.94

22 25 0.005 1.3 11.9 0.3 2 23 748 769 747 769 0.96

23 25 3.1e-05 0.0079 18.8 0.2 1 23 775 798 775 798 0.97

24 25 2.7e-06 0.00069 22.2 2.6 1 23 803 825 803 825 0.99

25 25 0.00011 0.028 17.1 1.3 1 23 834 856 834 856 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	1.5	3.9e+02	4.1	0.6	1	20	43	62	43	64	0.91
2	25	1e-05	0.0025	20.4	0.7	1	23	102	125	102	125	0.98
3	25	3.5e-07	8.9e-05	25.0	0.3	1	23	131	154	131	154	0.96
4	25	0.0069	1.7	11.5	0.2	2	23	161	182	160	182	0.96
5	25	1.8e-05	0.0046	19.6	0.2	1	23	188	211	188	211	0.98
6	25	4.1e-06	0.001	21.6	4.6	1	23	216	238	216	238	0.99
7	25	0.00075	0.19	14.5	1.6	1	23	247	269	247	269	0.97
8	25	0.0002	0.05	16.3	0.2	1	23	312	335	312	335	0.98
9	25	6.1e-06	0.0015	21.1	0.8	1	23	341	364	341	364	0.93
10	25	0.0064	1.6	11.6	0.3	2	23	371	392	370	392	0.96
11	25	9.8e-05	0.025	17.3	0.7	1	23	398	421	398	421	0.97
12	25	3.9e-05	0.0098	18.5	2.3	1	23	426	448	426	448	0.98
13	25	1e-06	0.00026	23.5	1.3	1	23	462	485	462	485	0.97
14	25	0.0065	1.6	11.5	0.2	2	23	492	513	491	513	0.96
15	25	3.7e-05	0.0093	18.6	0.2	1	23	519	542	519	542	0.97
16	25	6.4e-06	0.0016	21.0	2.7	1	23	547	569	547	569	0.98
17	25	1e-06	0.00026	23.5	1.3	1	23	583	606	583	606	0.97
18	25	0.0065	1.6	11.5	0.2	2	23	613	634	612	634	0.96
19	25	7.9e-05	0.02	17.6	0.1	1	23	640	663	640	663	0.96
20	25	0.00015	0.038	16.7	4.4	1	23	668	690	668	690	0.99
21	25	9.9e-06	0.0025	20.4	0.8	1	23	718	741	718	741	0.94
22	25	0.005	1.3	11.9	0.3	2	23	748	769	747	769	0.96
23	25	3.1e-05	0.0079	18.8	0.2	1	23	775	798	775	798	0.97
24	25	2.7e-06	0.00069	22.2	2.6	1	23	803	825	803	825	0.99
25	25	0.00011	0.028	17.1	1.3	1	23	834	856	834	856	0.97

Sequence Information

Coding Sequence: CTATTTAGAACGGAAGAAGTGTACATCGAGAGTAAACCAATCTTAGAATATCAACGTTGTTCCGAAATCTCCGAAGAAACCGCCAGCTTGCGTGAGCACGAGATGTCGGAAGGAGATATCGGACCATATCCTTGCGATGTTTGTGGAATACTCTTCCTTCAAAGGCAGTTTTTAAAGAATCACAAAACACATGGCACGTGCGTCAAGACGAAACAAAGCTGTCCCCTCCCATCTGAAGCGTTTGGATCAcgaaaaagtttaaaatgtcACCAACACTTACGACCCGAAGCACGACGTGGCGCTTACTCTTGCAATCTTTGCTCTGAAGCTTTTCCCACGAAAAAAAGTTTGACTCGACACGTAAATACAATGCACGAGACGAGATCTGGTTTTGTATGCGACATCTGTGACAAAGCGTTTAAGCGTAAGAGTTACTTGGACGCCCACCAAAGAGCGATTCACGACGAAAGCAATGAAATCTCCTGCAATATCTGTGGCAGGCGATTCTTATTTAAAACAGTATTAGAGCAACACATGGCGGTACATACGAAAGATTACAAGTACAAATGCGACCAATGCGACAGAGGTTTCAACATTCCGTCTGACTTAAAGTCTCACCAAGATACTGCACATAAAGGTCTTCGATTTAGGTGCACCGAATGCAATAAAATCTTCAAGCACCCTCGCAGCTACAAGAGACATCTCCGCGTGCACGAACCGGATTACATTCGCAGCAAGCACGTGTGTTCCTTCTGCTCCAAAGCCTACGTAGATGAATCATTGTTTCAGAAACATTTGCAACTCCATCGAGTACATATGTTCCCGAAAAAGGAGGAAGATTACATCGATATTAAACCATCCTTGCAGTATCCATGTTGTTCCGAAATCTTCGACAAAAGCACCATCTTACGAGACGAAGCACGACTTGGCGCTTACCCCTGCACTTCTTGCACTGAAGCTTTTCCAACCAATCAAAGTTTGAGTCGACATGTAAATACAGTGCATGAGAAGACATCTGGTTTTTTATGCGACATCTGTAAGAAAACGTTTAAGCGTAAGGGTTATTTGGAGGCGCACAAAAGAGCGATTCACGACAAAATTAATGATATCTCCTGCGATATCTGCGGCAAGCAATTCTTGTTTAAAAGGGTCTTAAAGCAACACATGGCGGTACATACGAAAAATTACAAGCACAAATGCGACCAATGCGACAAGGGTTATAACATTCCATCTGATTTGAAGACTCACCAAGATACCGCACATAATGGTCTTCGATTTAGTTGCAGCGAATGCGATAAAACCTTTATGAACCCTCGCCGCTACAAACAACACCTACGCATGCACGAACCGGATTATAATAAAGTGGATAAGGTGATATCTACTTTTTTTTGCGACATCTGTGAGAAAACGTTTAAGCGTAAAGGTTATTTGGAGGCACACAAAAGAACGATTCACGACAAAAGTAATGATATCTCCTGCGATATCTGTGGCAAGcaattcttgtttaaaaaggtCTTAAACCAGCACATGGCGGTACATACGAATAATTATAAGTACAAATGCGACCAATGCGACAAGGGTTTCAATATTCCGTCTGCTCTAAACTCTCACCGCGATACCGCACATAATGGCCTTCGATTTAGTTGCAGCGAATGCGATAAAACCTTTAGGAACCCTCGCCGCTACAAACAACACCTACGCATGCACGAACCGGGTTATAATAAAGTGGATAAGGTGATTTCTACTTTTTTCTGCGACATCTGTGAGAAAACGTTTAAGCGTAAAGGTTATTTGGAGGCACACAAAAGAACGATTCACGACAAAAGTAATGATATCTCCTGCGATATCTGTGGCAAGcaattcttgtttaaaaaggtCTTAAACCAGCACATGGCGGTACATACGAATAATTATAAGTACAAATGCGACCAATGCGACAAGGGTTTCAATATTCCGTCTGCTCTAAACTCCCACCGGGATAGCGCACATAATGGTCTTCGATTTAGGTGCAGCGaatgtaataaaaactttaagAACCTTCGCCGCTACAAACAACACCTCCGCATGCACGGACCGGATTGTATTCGTATTGATCACGTGCGCTTCTTATCTCCTCCACGTGTAAATACAGTGCATGACATGAGATCGGGTTTTTTCTGCGACATCTGTGAGAAAACGTTTAAGCGTAAGGGTTATTTGGAGGCACACAAAAAAGCGATTCACGGCAAAAGCAATGATATCTCATGCGACATCTGTGGCAAGCAATTCTTGTTTAAGAAAGTCTTAAAGCAACATATGGCGGTACATACGAAAGATTACAAGTATAAATGCGACCAATGCGACAAGGGTTTCAGCATTCCGTCTGCTTTAAACTCTCACAAAGATACCGCACATAAAGGTCTTCGATTTAGGTGCAGCGATTGCAATAAAACCTTTAAGAACCCTGGTCGTTACAAACAACATTTACGCATGCACAAACCGGATTATACTCATATTGATCACATGTGTTCTTTCTGCCCGAAGGCTTACGTGGATAAATGGGCGTTACGGCAACATTTGAAGAAACATCGAGACGGAGATAATCTGCGAGATGCTTAG
Protein Sequence: LFRTEEVYIESKPILEYQRCSEISEETASLREHEMSEGDIGPYPCDVCGILFLQRQFLKNHKTHGTCVKTKQSCPLPSEAFGSRKSLKCHQHLRPEARRGAYSCNLCSEAFPTKKSLTRHVNTMHETRSGFVCDICDKAFKRKSYLDAHQRAIHDESNEISCNICGRRFLFKTVLEQHMAVHTKDYKYKCDQCDRGFNIPSDLKSHQDTAHKGLRFRCTECNKIFKHPRSYKRHLRVHEPDYIRSKHVCSFCSKAYVDESLFQKHLQLHRVHMFPKKEEDYIDIKPSLQYPCCSEIFDKSTILRDEARLGAYPCTSCTEAFPTNQSLSRHVNTVHEKTSGFLCDICKKTFKRKGYLEAHKRAIHDKINDISCDICGKQFLFKRVLKQHMAVHTKNYKHKCDQCDKGYNIPSDLKTHQDTAHNGLRFSCSECDKTFMNPRRYKQHLRMHEPDYNKVDKVISTFFCDICEKTFKRKGYLEAHKRTIHDKSNDISCDICGKQFLFKKVLNQHMAVHTNNYKYKCDQCDKGFNIPSALNSHRDTAHNGLRFSCSECDKTFRNPRRYKQHLRMHEPGYNKVDKVISTFFCDICEKTFKRKGYLEAHKRTIHDKSNDISCDICGKQFLFKKVLNQHMAVHTNNYKYKCDQCDKGFNIPSALNSHRDSAHNGLRFRCSECNKNFKNLRRYKQHLRMHGPDCIRIDHVRFLSPPRVNTVHDMRSGFFCDICEKTFKRKGYLEAHKKAIHGKSNDISCDICGKQFLFKKVLKQHMAVHTKDYKYKCDQCDKGFSIPSALNSHKDTAHKGLRFRCSDCNKTFKNPGRYKQHLRMHKPDYTHIDHMCSFCPKAYVDKWALRQHLKKHRDGDNLRDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -