Oere033398.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010028515.1:3443-7347[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 3.6e-06 0.00091 21.8 1.1 1 23 39 62 39 62 0.96 2 23 1.4e-05 0.0035 20.0 0.3 2 23 69 91 68 91 0.94 3 23 0.099 25 7.8 0.8 2 23 98 120 97 120 0.87 4 23 6.9e-06 0.0017 20.9 0.5 1 23 126 149 126 149 0.96 5 23 6.7e-05 0.017 17.8 1.1 1 23 154 176 154 176 0.97 6 23 3.1e-05 0.0078 18.8 1.0 1 23 185 207 185 207 0.98 7 23 1.4e-05 0.0034 20.0 1.2 1 23 213 235 213 235 0.97 8 23 1.4e-06 0.00035 23.1 2.0 1 23 241 263 241 263 0.98 9 23 3e-06 0.00075 22.1 2.7 1 21 269 289 269 291 0.96 10 23 9.8e-06 0.0025 20.4 0.5 1 23 297 319 297 319 0.98 11 23 7.1e-05 0.018 17.7 0.3 2 23 339 361 338 361 0.94 12 23 2e-05 0.0052 19.4 1.2 1 20 368 387 368 388 0.95 13 23 2e-06 0.00051 22.6 2.1 2 23 401 423 400 423 0.96 14 23 3.1e-06 0.00079 22.0 1.3 1 23 430 453 430 453 0.95 15 23 1.9e-05 0.0048 19.5 0.4 1 23 459 482 459 482 0.94 16 23 0.047 12 8.8 0.1 2 23 489 510 488 510 0.93 17 23 6.9e-06 0.0017 20.9 0.2 1 23 516 539 516 539 0.96 18 23 1.8e-05 0.0046 19.6 1.8 1 23 544 566 544 566 0.97 19 23 3.9e-05 0.0099 18.5 0.8 1 23 575 597 575 597 0.97 20 23 1.1e-06 0.00029 23.4 0.3 1 23 603 625 603 625 0.97 21 23 0.00011 0.029 17.1 0.7 1 23 631 653 631 653 0.97 22 23 0.00044 0.11 15.2 7.2 1 21 659 679 659 681 0.95 23 23 2.7e-05 0.0067 19.1 0.3 3 23 689 709 687 709 0.97
Sequence Information
- Coding Sequence
- ATGCGGACGTTACAGGATTGGTTTGGGTTCTCCAAAAAGGAAGAAGATTACAAGCGAAAACAGGTTTTAGAAAAGCAAGAGGCAGGTGATGGTAGCGTGACGATATTGGACAATTACCCTTGTAATGTTTGTCCTAAAATTTTTCGTAAAAAGTATTATCTGACTCGACACGTAAAATTAATGCATGAGATAAAACCTGACATTGTCTGCGACATTTGTGAGAAATCCTTTAAGCAGAAGCGTTATTTGGAGGCTCACAAAAGTATGGTACACGATAAAACCAGTGATATCTCTTGTGATATTTGTGGCAAGAAATTCCTCTTTCAATGCATTTTGAGGCGACACATGGCGGGGGTGCATACGAAAGATTACAAGTACAAATGCTATCAATGCGAGAGGGGTTTCAGCACTCCATCTGATTTGAAATCTCACCAAGATATCGAGCATAATGGTCTCCGATTTGCGTGCGACAAATGCAATAAAGTCTTTAGAACCACTGTCGCATACAAGAGCCACCTGCTCCGGCACCAACCGAATTATATTTGTAGGAAATACACGTGTTCCTCCTGCCCCAAGACTTTCGAAAGCACTAGGGGGTTACGACGTCATTTGTTGATGCACCGAGGCGAAGGTAAGCACGTCTGCGAGACATGCGGAAAGATTTATGCTACCAAACATTGGTTAACTGATCACATTCGTGCACATACCGGTGAGAAGCCgtacgtttgcgacacttgtgggaaagCTTTCAGTAGCAAGAGCTTTCTTAAGCATCACGTATTGAGCCACACCAAGGAGAAACCCTACAAGTGCGATGTTTGCGGCAAAGGCTTTTCGCAAAGGTCGACTCTTAAAATCCACTTGCGTTGTCATAGTGGGGAAAGACCTTACGCGTGTGAACTTTGCGAGAAGAGATTTGTTACGAAAGGACTTTTGAATAACCACCGAAAGGTGCATGGCATCATACTGAAATTTCCCAAAAAAGAAGATTATTTGGACATTAAACCATTCCTGCGATGTCCACGATGTCCCAAAATCTTCGAAAAACCCACCAGTTTACGCAAACATCAGGTGCGGGCACACGAAGGAGATATCGAACCATATTCTTGTGATGTTTGTGGAAAACGCTTCCGTCGAAagaagtttttagaaaaacacAAAGCGGCTGACGGTTGTGTGACGATTTTGGAGACCAATCTAAGCTGTCCGCTATGCTCTAAGGTCTTCGCTACACGGCATAATTTGAGATATCACCAACGCACACTGCACGAAGCCCGTCGTGATGCCTACCCTTGCAATTTTTGCCCTAAAGCTTTTCGCACCAAGAAATATCTGACGCGACACGTAAATTTAATGCACGAAGTAAGAGTTGACTTTGCCTGCGGTATCTGTGAGAAATCGTTTAAGCAGAAGCGTTATTTGGAGGCACACAAGAGTGTGGTTCACGATAAAACTAGTGACATCTCTTGTGACATCTGTGGTAAGCAATTCCTCTTCAAAAGTATATTAGAACAACACATGGCGGGCCATACgaaaaactataaatttaaatgcGACCAATGCGAGAAGGGTTTCAACAGTCCATCTGCGTTAAAGTCTCACCAAGATATCGAACATAACGGTCTTCGATTTACGTGCAGCAAATGCAGTAAGGTCTTTAGAAATCCTGGTACGTACAAGAACCACCTGCTCCAGCACGAACCGGATTACATTCGTAGGAAGCACATGTGCTCTTTCTGTCCCAAGGCCTTCACGGAAGCAACAGCGTTACGGAAGCATCTGATGATCCACCGAGGCGAGGCCAAACACATCTGCGAGATATGTGGCAAAATTTACTCTACCAAGAACGCATTAACGGAACACATTCGCGTCCATACCGGCGAGAAGCCGTACGTATGCGACACCTGTGGGAAAGCTTTCACTAGTAAGAAGTTTATTAAATTGCACGTATTGAGCCACACTAAGGAGAAACCCCACAAGTGCGATCTTTGCGGAAAATGTTTTTCTCAGAGGACAACCCTCATGATCCATTTGCGTTGCCACAGTGGGGAAAGACCTTACGGATGTGAGCTTTGCGAGAAGAGATTTATTACGAAAGGACTGTTGAATAACCACATAAAAGTCCATGGTACCATAATAAAGTAA
- Protein Sequence
- MRTLQDWFGFSKKEEDYKRKQVLEKQEAGDGSVTILDNYPCNVCPKIFRKKYYLTRHVKLMHEIKPDIVCDICEKSFKQKRYLEAHKSMVHDKTSDISCDICGKKFLFQCILRRHMAGVHTKDYKYKCYQCERGFSTPSDLKSHQDIEHNGLRFACDKCNKVFRTTVAYKSHLLRHQPNYICRKYTCSSCPKTFESTRGLRRHLLMHRGEGKHVCETCGKIYATKHWLTDHIRAHTGEKPYVCDTCGKAFSSKSFLKHHVLSHTKEKPYKCDVCGKGFSQRSTLKIHLRCHSGERPYACELCEKRFVTKGLLNNHRKVHGIILKFPKKEDYLDIKPFLRCPRCPKIFEKPTSLRKHQVRAHEGDIEPYSCDVCGKRFRRKKFLEKHKAADGCVTILETNLSCPLCSKVFATRHNLRYHQRTLHEARRDAYPCNFCPKAFRTKKYLTRHVNLMHEVRVDFACGICEKSFKQKRYLEAHKSVVHDKTSDISCDICGKQFLFKSILEQHMAGHTKNYKFKCDQCEKGFNSPSALKSHQDIEHNGLRFTCSKCSKVFRNPGTYKNHLLQHEPDYIRRKHMCSFCPKAFTEATALRKHLMIHRGEAKHICEICGKIYSTKNALTEHIRVHTGEKPYVCDTCGKAFTSKKFIKLHVLSHTKEKPHKCDLCGKCFSQRTTLMIHLRCHSGERPYGCELCEKRFITKGLLNNHIKVHGTIIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -