Oere013629.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Osmoderma eremita
Gene Symbol
-
Assembly
GCA_031763485.1
Location
JARFOC010001317.1:304451-311364[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.00014 0.034 16.8 0.2 3 23 23 44 22 44 0.95
2 29 1.2e-06 0.0003 23.3 1.3 1 23 50 73 50 73 0.95
3 29 0.0052 1.3 11.8 0.1 1 23 79 102 79 102 0.93
4 29 0.038 9.7 9.1 3.2 1 23 108 131 108 131 0.91
5 29 0.06 15 8.5 0.1 1 23 137 159 137 159 0.95
6 29 1.4e-06 0.00035 23.1 3.9 1 23 164 186 164 186 0.97
7 29 0.0084 2.1 11.2 1.4 1 23 195 217 195 217 0.98
8 29 1.9e-05 0.0047 19.6 0.2 1 23 222 244 222 244 0.98
9 29 3.2e-05 0.008 18.8 0.2 1 23 250 272 250 272 0.96
10 29 1.3e-08 3.3e-06 29.5 0.5 1 23 278 300 278 300 0.99
11 29 0.00086 0.22 14.3 0.1 2 23 353 374 352 374 0.96
12 29 3.6e-05 0.0091 18.6 1.0 1 23 380 403 380 403 0.96
13 29 1.3e-05 0.0033 20.0 2.8 1 23 409 431 409 431 0.94
14 29 0.0022 0.55 13.0 0.6 1 23 437 459 437 459 0.98
15 29 6.8e-07 0.00017 24.1 3.9 1 23 464 486 464 486 0.97
16 29 0.22 55 6.7 2.4 1 23 495 517 495 517 0.98
17 29 1.6e-06 0.00042 22.9 0.1 1 23 522 544 522 544 0.98
18 29 0.00026 0.065 16.0 0.1 1 23 550 572 550 572 0.96
19 29 4.4e-07 0.00011 24.7 2.9 1 23 578 600 578 600 0.99
20 29 2.1 5.3e+02 3.6 0.7 1 13 606 618 606 620 0.91
21 29 0.0054 1.3 11.8 0.9 1 23 627 650 627 650 0.96
22 29 0.002 0.5 13.2 0.8 1 23 656 679 656 679 0.91
23 29 9.4e-05 0.024 17.3 0.8 1 23 685 708 685 708 0.98
24 29 0.00036 0.09 15.5 7.1 1 23 713 735 713 735 0.99
25 29 0.01 2.6 10.9 1.6 1 23 742 764 742 764 0.99
26 29 5.6e-05 0.014 18.0 0.1 1 23 770 792 770 792 0.98
27 29 0.00011 0.027 17.2 1.2 1 23 798 820 798 820 0.97
28 29 0.00012 0.03 17.0 3.0 1 23 826 848 826 848 0.98
29 29 0.54 1.4e+02 5.5 0.4 1 12 854 865 854 867 0.89

Sequence Information

Coding Sequence
ATGTTTGCAACGAAATGGGGCTGGGAGCATCACATACAGATCCATAGCAAAGACGCTGGGCGTAATTGCGACGAATGCGGAGAAGTCTTTGAATCCTCGAAAGAATTAACTGAACACAGAAAGGAGCTCCACGCCAGCGATGGCGACTATACGTGTAAAGTGTGCGGAAAGTCCTTCAAATATTGGGGACACTTAGCGGAGCACAGGAAAGACGTTCACACAGACGGTGAGGGCTACGAGTGTGAAGAATGCGGAAGGCTGTTTAAATCGCTGAAATATCTCGGCGGCCACGTAAAGGGCGTTCACGAGAAGAATCCGAACTACATTTGCGATTGCTGTGATAAGTGTTTCGCGAGCAAAGACGCGATGAGCAGGCACAAGGTCGTTAACCACACCAAGGCGTACAAGTACAAGTGTGACCAATGCGATCGGGGTTTCTTGGGTGTAGCCGAATTGAAACTACACCAGGAAAATCATGGCGTCGGCCGACACAGTTGCAGCAAGTGCAACAAGGTTTACTCGAACCGATCTAACCTCAACAAACATGTGATGACGCACGAACCCGGCTACGTTCCGAAGGTGTACGTTTGTGAGTTATGTGCGAGAGTGTGCTCAGGTAGCAATTCCTGGTATAAGCACATGAAACGTCACCAGGGAAAGAAATATATGTGCGAAATTTGCGGTAAGACTCTTACTAACCCTACAAGTTTGGGCGAACATAAACGGACGCATTCTGGCGAAAGGCCTTATGTTTGCAATATTTGTGGAAAGAGCTTCACCGTGAGGAGGGGACTTTTGGTTCATTCCGTAACCCATACAAAGGAGAAGCCGTATAAGTGTGAAGAATGCGGAAAGGCGTTTTCCCAGAAGGGCACTCTCAACATACATTTACGGACGCATTCCGGCGAGAAACCCTATCAATGCTCGCTTTTTCAATATTTGCTGTTCAACTTACTAACAAGATTCTTTTGTGTCCCTAGGTGCCTGGTAGAGGTCAAGCTTGACGAATATGAAGGTCAAGCTTTTCAGAATATATCCTCCTCAGAAAAAAACTGGCAATGCCCCGTTTGCTTTAAAGCATTGACGTCGAAATACGGCTGGAAGAAGCATATGGGCATTCACGAAAGAGGTGACGGCTACAAGTGCCAGGAGTGCGGGAAGGTCTTTAAATCCCTAAAATATTTCCTTGGCCACCAGAAAGGCGTGCACGAGAAGAATCCGGACTACATGTGCGATTATTGCGGCAAATGCTTCGCGACCAAGGACTCGCTGGCCGCACACAAAGTTCACCATACGAAGGAATACAAATTCAAGTGTGATCAATGCGATCGCGGCTACTTGAGGATGTCCGAGCTCAAAATACATCTGCAGAGCCACAGTACCGAACGGCACGTTTGCGACAAGTGCGACAAGGTATTCAAGAGTAAATCTAACTACAGGAAGCATTTGGAAACCCACGAACCAGGTTACGTTCCGAAAGAGTTCGTCTGTGAATTGTGCTCGAAGGTGTGCTTGGGCAACAATGCCTTCTACAAACATATGAAACGTCACAAGGAGAAGAATTACGTTTGCGAAATCTGCGGTAAGACGGTTACATCGCCCGAAAGTTTGAGGGTGCATAAACGCATCCATTCCGGCGAAAGGCCGTATGTTTGCAATATTTGCGGAAAAAGCTTCGGCGCTAGAGGGAGCCTCTTGGTGCATTCTGTAACCCACACCAAGGAGAAGCCGTATGAGTGTAAAGAATGCGGAAAGGCTTTCTCGCAAAAATGCACACTTAACATCCATTTACGGAAACATTCCGGCGAGAAGCCATATCACTGTTCATTTTGTGAAAAACGATACGTACGACAAATCGAAGATCACAGTAGTACTCGGTACACGTGCGTAGAATGCAACAAGAGTTGGAAGACTTGGAAATCTTGGAATACACACCAGAAGGGCTTCCACGAGAATGATCCTGATTTCGCTTGTAGTTACTGCGTTAAGATTTTCTCCACCAAGTTTTCGCTGGCCATGCACAAAGCCCAGCAACATACGAAAGAGTTCAAGTACAAGTGTGAAATGTGCCAGCGTGGATATGCCAATATGTCGCTATTGAGGAGCCACCGAAAAACGGTCCATACCAATCTACCTTACAAATGTGACAAGTGTAATAAGGTTTTCAAAAAGAAGTGTAGTTACAAGATGCACCTCTCAACTCACGAGGTCGCCAGGAAAGTGTATACTTGCGAATTGTGTTCAAAGGTATGCATAGGTGACATGTCTTACTTTGCACACATGAGACGTCATAAAGGTATTCAGAAGTATATCTGCGAGATTTGTGGTAAAGCGGTTACGAGCATTACGAACTTTACGGCACACAAACGGATTCATTCGGGTGAGAAGCCATTCATTTGTGACACCTGCGGTAAGAGTTTCCATAGCAAGGGAGTGCTGAAGTTACACGTCCTGACCCACACGAAAGAAAAACCCCACAAGTGTCAGCAGTGCGACAGCGCTTTCTCGCAAAAAACAAGCCTCACTATTCACTTACGCCAGCATAGTGGCGAAAAACCGTATCATTGTGAAATTTGTGAGAAGAAATTTATTAAACAATTGAGAAGGTTAAAAAACATAGACCCTGAATGTCGTGGAGATTTAACCACTTGCGCTATAAAGACGTGCCACGCACGTCGAGATGTTTTAGTTCCAAAGCCGCCAGCGACGTGTATACCACGTCGATTCGTCACGTCGGCTAACAGTTAG
Protein Sequence
MFATKWGWEHHIQIHSKDAGRNCDECGEVFESSKELTEHRKELHASDGDYTCKVCGKSFKYWGHLAEHRKDVHTDGEGYECEECGRLFKSLKYLGGHVKGVHEKNPNYICDCCDKCFASKDAMSRHKVVNHTKAYKYKCDQCDRGFLGVAELKLHQENHGVGRHSCSKCNKVYSNRSNLNKHVMTHEPGYVPKVYVCELCARVCSGSNSWYKHMKRHQGKKYMCEICGKTLTNPTSLGEHKRTHSGERPYVCNICGKSFTVRRGLLVHSVTHTKEKPYKCEECGKAFSQKGTLNIHLRTHSGEKPYQCSLFQYLLFNLLTRFFCVPRCLVEVKLDEYEGQAFQNISSSEKNWQCPVCFKALTSKYGWKKHMGIHERGDGYKCQECGKVFKSLKYFLGHQKGVHEKNPDYMCDYCGKCFATKDSLAAHKVHHTKEYKFKCDQCDRGYLRMSELKIHLQSHSTERHVCDKCDKVFKSKSNYRKHLETHEPGYVPKEFVCELCSKVCLGNNAFYKHMKRHKEKNYVCEICGKTVTSPESLRVHKRIHSGERPYVCNICGKSFGARGSLLVHSVTHTKEKPYECKECGKAFSQKCTLNIHLRKHSGEKPYHCSFCEKRYVRQIEDHSSTRYTCVECNKSWKTWKSWNTHQKGFHENDPDFACSYCVKIFSTKFSLAMHKAQQHTKEFKYKCEMCQRGYANMSLLRSHRKTVHTNLPYKCDKCNKVFKKKCSYKMHLSTHEVARKVYTCELCSKVCIGDMSYFAHMRRHKGIQKYICEICGKAVTSITNFTAHKRIHSGEKPFICDTCGKSFHSKGVLKLHVLTHTKEKPHKCQQCDSAFSQKTSLTIHLRQHSGEKPYHCEICEKKFIKQLRRLKNIDPECRGDLTTCAIKTCHARRDVLVPKPPATCIPRRFVTSANS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-