Oere051459.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010054095.1:262-816[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-08 9.5e-05 24.3 0.1 4 42 17 55 15 57 0.92 2 2 5.4 7.5e+03 -1.0 0.0 25 33 92 100 89 104 0.79
Sequence Information
- Coding Sequence
- ATGCCACGAAATCAACAAAATGTAAAGAGGACCAAACCAGTAGCCGCAAATATGATAGCAGCAGCTGaagctgttttacaaaatcattttacgCTAATAGGAGCATGCAAACAATACAACGTAAGCAAATCTACACTCTCCAGACATTTACAAAAACACAGAGAAGTAGGACATGATATCTTCGTATATAACGCTGCACAGGATGTTAAATTAGTCTTGTGCGTTGAACAAGAGCAGGAGCTAGAAAGTTATTTGACCGAAAGTGCAAAGATGTACTATGGAATATCAACTACACAACTAAAAGAAGTAGCCTTCAattatgaaaatgcaaataacGTGAAAGTTCCAACGTcttgggaaaataataaaatggcaGAAAGAGAGTGGCTTAGATATTTCTTTCGAAGGCATCCTAATCTTGCCTTGAGAAAACCGCAAGGTACAAGCTTAGCTCGCTCAATAGCCTTTAATAGAGAGAATGTCGCAAAATTTTTTGACAAGCTGCAACAGATAATGGAAAGGTACCAATTTCCtccaaaaatatctttaatctaG
- Protein Sequence
- MPRNQQNVKRTKPVAANMIAAAEAVLQNHFTLIGACKQYNVSKSTLSRHLQKHREVGHDIFVYNAAQDVKLVLCVEQEQELESYLTESAKMYYGISTTQLKEVAFNYENANNVKVPTSWENNKMAEREWLRYFFRRHPNLALRKPQGTSLARSIAFNRENVAKFFDKLQQIMERYQFPPKISLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01123622;
- 90% Identity
- -
- 80% Identity
- -