Oere057169.1
Basic Information
- Insect
- Osmoderma eremita
- Gene Symbol
- -
- Assembly
- GCA_031763485.1
- Location
- JARFOC010063824.1:845-1729[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-08 8.5e-05 24.5 0.1 4 40 19 55 16 59 0.94 2 2 1.3 1.9e+03 1.0 0.1 16 23 117 124 110 145 0.64
Sequence Information
- Coding Sequence
- ATGCCCACAGAATACGAAAGAAAATGCAAGGAAAGGGCTCGTTGGTCCCAAGCATCATTGGCTGCGGCCTTACAGGCGATTAATAGCGGCAAGGTGGGCGTAAATGACCCGTCTGGAACGTTCGAAATAGCGTCAAGGACATTACATCGCAGGAAAAAAACAGCAATACTGCAAAAAAAGTGTAAAGGTTTTCCACCGACTAGGGATGATTTCAGACACACAGCTTATAAATTTGCTACTGCCCTTTATATTCCTAATAAGTTTGACGCTAATAGCGAAAAAGCGGGTTACGATTGGCTGAACTCTTTCTTAAAACGCAATTCTACTCTCTCGGTAAGAAAATCTGAGGGTGTGTCTACTGCTCGTGCCCAAGGATTGTCAAGAGACCGCGCTCAGGGATACTTTCAATTGCTATATTCTGTTCTGCAGGAAAATGATATCTTAGATAAGCCTGGCAGTCTGTATAACATGGATGAGACCGGTTTACAGCTAAATAATAATGCCACTTACGTTATTGCCACTAAGGGTTCAAAACTACTTCCATCTGTAACATCTGGTGAAAAAGCAGAAACCGTAACATTAATTGCACGTGCTAATGCGGAAGGAAGCTTTCTGCCGCATGTATTTATTATGACGgTCGATGGGCATTCATCCCATCACAGTTGTATCGAGACTATGCTGAACAAAATGACATTGTTATAG
- Protein Sequence
- MPTEYERKCKERARWSQASLAAALQAINSGKVGVNDPSGTFEIASRTLHRRKKTAILQKKCKGFPPTRDDFRHTAYKFATALYIPNKFDANSEKAGYDWLNSFLKRNSTLSVRKSEGVSTARAQGLSRDRAQGYFQLLYSVLQENDILDKPGSLYNMDETGLQLNNNATYVIATKGSKLLPSVTSGEKAETVTLIARANAEGSFLPHVFIMTVDGHSSHHSCIETMLNKMTLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -