Basic Information

Gene Symbol
kn
Assembly
GCA_031763485.1
Location
JARFOC010000130.1:661323-694721[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-18 2.5e-13 51.6 4.4 182 209 51 78 48 80 0.95
2 2 1.1e-22 9.8e-18 66.1 11.3 387 515 78 218 78 239 0.68

Sequence Information

Coding Sequence
ATGGACGAAGAGGAAATCAGTTTGCGAGTAAGCGaGGCGATCGTTATCGCCCGACTGAAACGGGTAATTTATCTTCCGGTAGGTGGCAGAAGGGAATTAGAAGACGAAGGGTGGATACTCTTCCTCAAAATTCACCGGAATCAGCACATTAGATTTTTCTTGAAGTTCTTTCTAAAGTGCAATCAAAACTGCTTGAAGAATGCAGGGAATCCCCGAGATATGAGAAGATTTCAGGAAATAATATTGAAGCGAGCTGCCGACTTGGCGGAGGCCCTGTATACAATGCCTAGAAACAACCAATTATCTTTATCTGCACCCCGATCTCCCACAATGGCGAATAATGGTATGACAACGAGTTTTAACACGTACACTGGTCAATTGGCGGTCAGCGTTCAGGACAGCGGAAATGGTCAGTGGACAGAAGAGGAGTACGGCAGAACGCAGACCAGTAGCGTGTCACCTAGGGGTGGCAGTTATTGTTCTTCTGCCTCGACGCCTCATTCGTCCAACGGCGGCTCCTACGGAAGCAACATGAATGGTTACGGAGGAGCTACTCCAACTAGTTCTACGCAATTATCGAATATGCTACCCGGCTCACCGTCAGCcggaatttttaattcaacaccaaGAATGGGTCTGGTATCTTCGCCGTTCGCATCCATGAATCCGTTTGCATTACCCACTTGCAACTCTCAGGGTTATGGGTCTTCGCCACTAGTGGGTACGACGAAATAG
Protein Sequence
MDEEEISLRVSEAIVIARLKRVIYLPVGGRRELEDEGWILFLKIHRNQHIRFFLKFFLKCNQNCLKNAGNPRDMRRFQEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMANNGMTTSFNTYTGQLAVSVQDSGNGQWTEEEYGRTQTSSVSPRGGSYCSSASTPHSSNGGSYGSNMNGYGGATPTSSTQLSNMLPGSPSAGIFNSTPRMGLVSSPFASMNPFALPTCNSQGYGSSPLVGTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-