Basic Information

Gene Symbol
Arid5b
Assembly
GCA_031763485.1
Location
JARFOC010036640.1:1-3441[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-13 5.8e-09 38.5 0.0 39 89 2 50 1 50 0.92

Sequence Information

Coding Sequence
ACTAAAGTCCAAAAATTTGGCGGATACGACGTAGTTACTTCGAATCGTCTTTGGAAATCGATTTTCGACGATTTGGGTGGAAATCATGGTAGTACAAGTGCAGCTACTGTCATACGGAGACATTACGAAAGATTTTTACTGGCGTATGAACGTCATATTAAGGGAGAAGAATACAAACCATTACCAATCTCCGAAAGAAGAAGGCTGAAAAATAAAGTCAACAGAAATAGCGTTAGCGATGCTGAAACCAGCGAATGTACATCCGGTAGTGATAACAGCACTCCAATGCCCCATTCTTTAGCTCCAACACAGTTTATCTCTGATTCCGGAACTACAGAAAATAAGgATAATCCCGATAAAATGAAGACCTCATCATTGCGTAGTATCAGAGTAAAGCCAGAACGATTAAGGGAATCGAGCAAATTGAAAATCGAAAACATACTTAAAGAACCGAGAGTgggaaataataatgttgtgCTATTAAAAACGGAGCCGAAAGACGAAATTGATGAAAAACCGAAACTTCTAATACTTCCCGAAACTAAAGATAATGAACCTACCACAACCGCTCTCGCTCCGGTTCAAAAGGCGTCGACGGAAGACTCCCTGAGTCCAATTGAGAGCAAGGACATCCCCATCGTGGAAATGAAAGAAGAGAATGAAGCACAAGTCGAAATTATCGAAATACCTCCGAAAGATGAGGTGTCGTATAAAGATGTAATAGAATTGGATTCGACGAACGCGTACAAAACGATTAGTTCATCAGTTAATAACAAAAGTGATACGGTTATAACGGAGGTTAAAAAGCAAAAACTTGATATATTAAAACAGGGCGGTTTAGAAGTGACTCCGGTTCGAAATACCGCGAATACAATAAAGGAATCGCGACCCTCGGTGATACAAACAACTGCAATAACACACCGCGCGGAAATAATTCCTAATGACGTCAAAATGGACGATAAGAAACAAATGCCTCCGCCGCAGTCGGCAACGTTAACGAAGCGATCGGTACACATGCAACCTGTAGTACCCGCAATACTTTCGACACCGCCAATACCAATTCCGATCACACCCAAACCGCCAGTACACGGAAACGGATGTAAGACTTTCGCGTTTAGCAATCGATCTCCCCCGAAGGTGTTACAATCCAAGTCAATTTACTCGCCGTCTAGCCAAACGATATACGGTGATCCGAAAGACATTTTTCAATCGACGATTCACAATATTCAAACGCCCAGATTTGCAGAAAGTGTGCGAGTTCAACAGACCGGTGGTGGTATTTTAGACTTGACGGTGAAAAGTCCTCAGAAGGCTGCAGTTCAAACTCAACCGCACAATATCCACAACGCGCACCTAGTGATTCCGTCGCCTTTCCCTCTTTTGGATCACAAAAAGGTAATTGAGGAACAGATAAATACTTAA
Protein Sequence
TKVQKFGGYDVVTSNRLWKSIFDDLGGNHGSTSAATVIRRHYERFLLAYERHIKGEEYKPLPISERRRLKNKVNRNSVSDAETSECTSGSDNSTPMPHSLAPTQFISDSGTTENKDNPDKMKTSSLRSIRVKPERLRESSKLKIENILKEPRVGNNNVVLLKTEPKDEIDEKPKLLILPETKDNEPTTTALAPVQKASTEDSLSPIESKDIPIVEMKEENEAQVEIIEIPPKDEVSYKDVIELDSTNAYKTISSSVNNKSDTVITEVKKQKLDILKQGGLEVTPVRNTANTIKESRPSVIQTTAITHRAEIIPNDVKMDDKKQMPPPQSATLTKRSVHMQPVVPAILSTPPIPIPITPKPPVHGNGCKTFAFSNRSPPKVLQSKSIYSPSSQTIYGDPKDIFQSTIHNIQTPRFAESVRVQQTGGGILDLTVKSPQKAAVQTQPHNIHNAHLVIPSPFPLLDHKKVIEEQINT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-