Basic Information

Gene Symbol
ARID5B
Assembly
GCA_031763485.1
Location
JARFOC010070010.1:1-1465[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5 1.3e+04 -1.1 0.0 38 52 38 52 34 77 0.80
2 2 5.5e-17 5e-13 51.5 0.0 3 62 174 233 172 233 0.95

Sequence Information

Coding Sequence
AACACAACTGATAAAGCACTATCGGTGGTAATCCTGAGTTATCCCAGGTACTGCCGGTATAGATCGGTGATGAAGAGATTGGAAGGTGTGGAAGACCAATATCTGAAATGCAAGTTGGTGAACGCCCTAGGAGGGTTCGGCGTCGTCTCCTGCCACACCAGAATATTGTTTTGTAGAGACACCTTCGATTATCCCGAGCTGGAAGGGCACGAACTCCTCTGCAACCATCTCGCTCCGAAATTGAAAGGAAGGCCTAGGGGAAAACGGAAAAAGCGCAGTTTGTCGCCTGGTTCGGAGAGCAACGAATCGGAATGTTCGATTTTCAACGTTGCTAGCACATCACAATGTCACGTGACAAGTACATCCCACTACAGTATCCCCAGCACGTCGAATTGTAATCCGATAGCCGATACAGCAATGAGCAAGATTGGGAATGGTGATTATATTAATggatacagaaaaaatattggCACTATATCAACTAGACGTAGCACTCGTTCTGGGGATACTACCGAAGGCAAAATGTTCCTTAGGAAACTCACATCATTTATGAAGACAAATCACACACCAATAGGAAGAATACCTTCATTGGGGTACAGAGAGATCGATTTGCATATATTCTTCACTAAAGTCCAAAAATTTGGCGGATACGACGTAGTTACTTCGAATCGTCTTTGGAAATCGATTTTCGACGATTTGGG
Protein Sequence
NTTDKALSVVILSYPRYCRYRSVMKRLEGVEDQYLKCKLVNALGGFGVVSCHTRILFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSPGSESNESECSIFNVASTSQCHVTSTSHYSIPSTSNCNPIADTAMSKIGNGDYINGYRKNIGTISTRRSTRSGDTTEGKMFLRKLTSFMKTNHTPIGRIPSLGYREIDLHIFFTKVQKFGGYDVVTSNRLWKSIFDDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-