Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_012274295.1
Location
NW:4134192-4145741[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.052 5.1e+02 -0.5 0.4 187 208 63 84 59 94 0.87
2 3 0.17 1.7e+03 -2.1 0.5 85 124 363 399 346 421 0.43
3 3 8.8e-101 8.7e-97 322.4 8.4 1 218 698 908 698 908 0.92

Sequence Information

Coding Sequence
ATGGAATCGTCTTCGGTTGAGGATCGTGTTTTCGAGGCCCAAAAAGGTTTCGCCGCGTCAGTAGTAGAGCCGGTCGCCAGGCCTGAGTCGAGAGCATCTACATTAACGGAGGAGGTTGAGTCGACGGGACTCGACGCGAACGTCGGGACCGCGGCTACGtcagaagagaagaaggaggaagatTGTGATCGATGCAAGAATAGCCAAGAAAAGGTAGAATCATCCGAGACTCGGCTGGTAAATCACGAGGTTTCAGGCGACTGTTCGACGGAAGAGGATCAATCGAAGCTGCTCGATATGGGGCTCAAGTTGGGAAAGCAAAAGAAGGAGGCTGGAGAGTCGAACGAATCCGAGGATAGTTCGTCGACGGTTCAGTGTCCCGATGAACAGGGGGAGAACGAAGTGCCAGAATTCGTAACCTCGTCGCCGGTATGCAGGAAAAGACCAGCCACCGATTTCCTGCCGATCAACGCGGAAATCAAGAGAATAGGAATGGAGGTGACGGAAAACGAGACGACTCAAGTGAGGAGCGACGTGAGGAGGATTTCACCGGTGCTGGTTAGCCTTCGAGAACGTACTCTAGGCGAGATATCCTTGTCGTCGAGCTCGTGTCTCTTCGACGACGACACGAACGGTCGATGTATCTCGAGAAGCAGCAGAATCCTCGACGATTCGTTCACCGGTGTTTGTCGATTGAACGATAGTCTCAGCCTGGAGAACTCTGTTCAAGTTAACGACGATCCTGTGACAACGGCAGATTCTTCGAAGTCGGAGCACAGGGTCGACGGAACGGCGTCGGAAAAAGATAAATGTACAGAGAGCAAGGAGAAGAAAACGTTGGAGAATCCGTTCATCGACGAGGATTCTTGTTATTCGCTGCCTCGCGACAGTCCTGGCAGGGATCTGAACTCGTGTCAGCAGCCGAAACAGTGCGAGGAGCCGATCGAATCGTCTCCCTACAATGGTGCATCATCCTGCGAAAGGTCCGCTAACCCGATCGACGGTTCCTCGTTTCCTAATTTAATCGTGTTATTGGAACGCATGGATGCCCACAGTCCGATGTTGAAAGAGCagaaacgaacgatcgttAAGAAGAAGCCGAAAAGCACCACGTGCAAGGACGTTGATAGCGCGGAGGCGAAGACTGAGCCGGAAGATTCGTCCAAGGACTCGTGTTCGATGCAGAGGCGCGTTCTCGAGAGGGGCGATCAATTGCTGGACTCTTCCGAGGTGCACTCGCCGAACATCGTCCGCGATATGCCGTGTTCGCCTTCGATAAACGGTATGAAGCAATGCAAGGTGATCTTAGAGAAGTTGATCTTGTCGCACCCGGTGGACATGACCGAACAGAAGTTTTGTCCGGAAACAGAAGAGACAAAAGCCAAGGTGGTCGTTAAAGAGTTGGGCGAGGACGAGGAAATGGTATTTGCCTCGGCTCTGTCCGCCGGAAAAGAGAATCCTCGGCCGGTGAACAATTTGGATTCGTCCGAGGCGACACCCAGCTCGCCGGAGGAGACTCTGGAACCAGCCACGGAGGTTCCAGAAGTCGTCGACACGGAAACCGAGACTGAGACCGGATCCGATAGCTCCGAAGTGTCGTCCATGAACGCGCGGCTTCGTGGATGCGACGACGACACGGTGTCCGACCAGATATCTTGCCCCGAGAGCGAATCCATGTGCTGTGTCGACATCGGTCCGGAAATTATAACCAGGTTGGAATCGGAAAGGCCGGAAGCGTTCACGGAAGACTCGGCGGAAAGCCTGGCTCTTGCCACCGGTGCTCGGGATGAAGTTAGGTCGGATGGAAGTGATTCTGGTCTTGGAAGCGAGATACCTGGAGAGTCTGGACCTGCACCGGCTCCGGAAAGCGATTCGGAGACTTCGTTCTTGGACAGGATACCCGATGACATTCTTTCcgataaagaaaaagTGGTGAATCAATTGGAGTCAATCGGAGTGGGTGTACCCGGTACACCGCAGGCGCCGTTGGTGAACTTCCCGAGTCCACCGAAGAGCAATTTGAAACGACGATTAACAGATTGCATGGAAGGTGCTCCGAGTCCGAAGAAGAGTAACACCGATGAgtcgatgaaaaagaaacgcaaCATTCAATTCGATGCCGTGACCGTGTACTACTTTCCTAGGGCACAGGGTTTTGCTTGCGTGCCTTCTCAGGGTGGCAGCACTCTTGGTATGAGCGCGACGCATACTCATGCCGAACGGTTCTCGTTATCGGAACACGCCGCCGAACAGAGGCGGATTCATCGCGCGAGGCTTGCACAATTGCGCTCGGAGCGTGCTGCAAATTGCGTGTCCGAGGCAGCCTCCAGCTCGGAGGATCCGAGCGACGACACGGACGAGGAACAGAGCGATAACGAGGAGTTGGACATCGATAGTTATTACTTCCTGCAGCCAGTACCAACGTGGCAAAGACGAGCCTTGCTACGTGCCGCAGGAGTTCGTCGAATAGACGCGATCGAGAAGGACGAGTGTCGCGATATCAGAGCTAGCAGAGAACATTGTGGTTGCGGATGCAAAGGATACTGCGATCCGGAGAGTTGCCCTTGTAGCCGTGCCAACGTCAAGTGCCAGGTTGATAGAGCCGGTTTCCCTTGTGGATGTACTCGAGACGGTTGTGCGAATAGTTCAGGGAGGATTGAGTTTAATCCGGTAAGAGTACGGACGCATTTCATCCACACGTTGATGCGGTTAGAGTTGGAGAAAAAGCATCgggaagaagaggagggtACGGATCACGATGTTTCCGACAATCAGCACGGTAGAAGCCCGTTGAGGGAGATTAACTTGGGATCTGTAATGGAGAATAGGAACGCGGAATCGTGTTTGAACGGGGGCGGTTTTACGACGTTGCACTATGAGAATCACGACGCGAGGGATGCCGGGACAAATTGCCAGCCAGACGTAACCGGCACAAGAGAGGATAGCCTGGATCTGTACGCTATCAGAGACGATTGTTATCCAAGCGAAGACACTGTTGACGGTACGCAGGGACCTCAAAGGAAACTTCATCCTGAATTTAGTCAAGCTTTTCAAACGTTCTCGGGCCAAACCGGTGCCGGGGTTAATTTTCAACAGCCTACTTATCAGGATTACCAGCCTTACGCTAACCTTCCTTCCACGTCTAGGGTGCAATTTCAGCCACAATTCCAAACGGTGCCAGGAAATCCAGGGTTCTCACACTACTCGCCTTACGGACAAGACGCTGCAACAATCCAGGGGAACTGCCAAGTCCATCCAGGACAACATTCATCCGCCTACGAGACCAGCTTCGCCCAGGACGAAACAACCGGATCACAATACACGAATCTGAACTCGGTGCAACCGATGAACACAGTCGTCCAACAAATGGGTAAATTAGAACCGTTCTCGGAACTTTTGTCAGCTAGATATTCCTACTACGGTGAAATGGAGCCCCAGACGCACGGTACTTATCACGGGAACGGAACCAAGGTCGAGGTGGAAAAGAATCAAGGTAACGAGCAACAATCGGAAAGTACGGAAGAGTGCGACGAAAACTTTGGGGAAATCATTAAAAAGTCAATGGTCGAGACTGTATCTGCTTAA
Protein Sequence
MESSSVEDRVFEAQKGFAASVVEPVARPESRASTLTEEVESTGLDANVGTAATSEEKKEEDCDRCKNSQEKVESSETRLVNHEVSGDCSTEEDQSKLLDMGLKLGKQKKEAGESNESEDSSSTVQCPDEQGENEVPEFVTSSPVCRKRPATDFLPINAEIKRIGMEVTENETTQVRSDVRRISPVLVSLRERTLGEISLSSSSCLFDDDTNGRCISRSSRILDDSFTGVCRLNDSLSLENSVQVNDDPVTTADSSKSEHRVDGTASEKDKCTESKEKKTLENPFIDEDSCYSLPRDSPGRDLNSCQQPKQCEEPIESSPYNGASSCERSANPIDGSSFPNLIVLLERMDAHSPMLKEQKRTIVKKKPKSTTCKDVDSAEAKTEPEDSSKDSCSMQRRVLERGDQLLDSSEVHSPNIVRDMPCSPSINGMKQCKVILEKLILSHPVDMTEQKFCPETEETKAKVVVKELGEDEEMVFASALSAGKENPRPVNNLDSSEATPSSPEETLEPATEVPEVVDTETETETGSDSSEVSSMNARLRGCDDDTVSDQISCPESESMCCVDIGPEIITRLESERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGESGPAPAPESDSETSFLDRIPDDILSDKEKVVNQLESIGVGVPGTPQAPLVNFPSPPKSNLKRRLTDCMEGAPSPKKSNTDESMKKKRNIQFDAVTVYYFPRAQGFACVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVSEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAIEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKHREEEEGTDHDVSDNQHGRSPLREINLGSVMENRNAESCLNGGGFTTLHYENHDARDAGTNCQPDVTGTREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSGQTGAGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQTVPGNPGFSHYSPYGQDAATIQGNCQVHPGQHSSAYETSFAQDETTGSQYTNLNSVQPMNTVVQQMGKLEPFSELLSARYSYYGEMEPQTHGTYHGNGTKVEVEKNQGNEQQSESTEECDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01122427;
90% Identity
iTF_01122427;
80% Identity
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