Olig001061.1
Basic Information
- Insect
- Osmia lignaria
- Gene Symbol
- JARID2
- Assembly
- GCA_012274295.1
- Location
- NW:12171027-12178857[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-23 9.4e-20 70.0 0.0 6 89 1375 1456 1371 1456 0.94
Sequence Information
- Coding Sequence
- atgGTGCTAAGTcgaaatgataaaagaaagagaaaagaaggggATTTGGTGGATCTTATGGAACCACTTTCAGAATCTCCAAAGAgaACTAAAGTGCATGCACAGAGAAAATTTGCACAAGGAGCAACAAATGTTTTTAATCCTTCGCATACTCCCATTAAGGATAAAGAGAAAGCTAAACCAGCAGTTATAACTGAATTAATAACACATAAACGACCAAATACAGAAGACTTTTTAACATTTCTATGCTTCAGAgGAACATCAATCTTACCTCCAAGTTTAAACTTTTTTAatgttggaaataaaaaagaaaagcctGAACCTAAGCCATTGCGTGCATCAACTGATAAGGCTATATGTTCTAGTACCACATCTAGTGAAAATCAGAAATCAGACTCAAGTCAAAAAATTGTTACCAAAGTAAAACCTGccattaatgataaaaaaaaggttTCAGGTtcaatacaaaaaaatattactacaTTTAAGAGTGCAACATCTACTGTACAAGCACTGAAAAAGAAGTATCAAGAGCAACGTCTTGCTAAgcaaaggattaaaaataaatttaaaacatcCTGTGTCATGAGAACAAGGTCTTGTACAGAAAGAACAATGTTAAAATCAACAAATCAGTTGCCACCTAGAAAGTTCCTTCCAAGAATTGAGACTAAAAGACTTGGTTTAAGGAGCAGTGTACTTGCAGACAAAACGAAAAAGACTTCCCCAAAAGTTAAGTCTGCTCCACCAAAACCAAAGAAGAAGGTAATTGCAAAACAAAATAGTAGTGATACATCAACTTCAGAATCTACATCTGaagatgaagaggaagaaggtcCTTCAGAAAAATCAGTATCACAAATAAAACGTACAGCTCAAAAGAATgttcaaaaaaatatatgtacaagaagTAAATCTGAAATGAGAAGAATTACTAGATCTCATAGTGGAACGGTTTCTCCAAAAAATCTTTGTAGAAGACCGACAAGAAAGACAAAAGAGGCAGCTGCGGTATATATGGAAATTCTCGGGAGAAAGCTTATAAGTCCTGATTTAGAGAATGATGATAATGTTTCTATGGATAGCTTTCCAGAATTACCAAATGCACGAAAAAGTGCTCAAACAGAAAATGAAGTTAAGACTAAAGCAAAACAGTCTGTTTCAAAACCAGTTACGAAAAACAAAGATGGTAAAATTACTGGTATTCATAGTGTATCAAATAAACGATTAGACAAAACTAAAGTTAGTAAAATTGcttttaaaagtaaaagacTTATAAGAGTTCAAAAGTATTGCGAAATAGATAGTGATGAGGAATCGGTGAGTTCTTCTAATGATACCAGTAACACAAAGCCTGTTACAAGACGGAgtttaggaaaattaaataaacctACAAGCCGATATCTTCGATCTTCTACGAAAAAAGTAGTTACACGAATTGAAGttcaaaataatgtaaatatcaAATCGAAATCTCAagttcaaaataatttacggtttaataaagaaaaatttgtaataaaacgtAAACGAGAACAAAATTTTAGTAAATCATCACCTGAAAAAGGTGgtgaattaaaacaaaaagaaggaaaaatacaaaataatgcaCATGATATCACAGATTCTGATGAAGAAACTTTAGGAATGCTGCTTaataagttaaaaagaaagaaagatgacCCCCCGccaaatgaagaaatttctcctaataataacaacagtagtagtaataataataataataataataataataatattaataataatgataatagtAATTGTGATGTTATAGACAAAGTTGAACACTCATTAGATGAGAATTCTGTAAAAGTGGATCTTTCGAAAGTATCGGACGACGAAGAATCTTTTCGCGGGTTTACAAAGAAAACGATATCTAAAGTATTAAATTCTTGTCAAACCCATGCTAATGCTAATCTTCTAGTCACGGAAAAAAGTACTGACACATCAAAAACGACTAACACAGAAGATGTAAAAGATTCAGATGCATCTAATCAACAAGAAAAtaaggaattaattaataatgatccTTGTTTACATAAAACTTCTCCCACAACAAGTGTGCCAAATAATCAATCTGTCCAATCTGAAAGAATCCAAAAGACAAAATTGgaatttacaaaacatattgAAAAAGAGTGTCATCACAAACCAGAAATGTCTGGAAATGATGTAGATATGTCTTTGTCAACATTACatgtaagaaaagaaaaggtaaacATGTCAACCgagcaaattgaaaaatggttGAATGAAAGTTCGTTtgccaaagaagaaagtaaattggaaatggaaaatgtatCTGCCTTTAAATACGAtgtttgtgaaaaaaaaactgaTGTATCACATTTGtctatttcaacaaaaattcaacatttgGTAAGACCAGTTAACGTTACACTTTCAAAATTAGCAGAAAAGGCAAACGCGAAAGATCGTATGAATATGCAGAATAAATGTATATCCATTACAACAATGGACGTGAAGTCCATCGATGTAAAgcaggaaaatgaaattactattGTAAATAAGAATACCGCAGAGttgaaagatattaataaaacacgAAATGTAAAATCAAATAAGGATTCATGTGCTggagaagaaaatgatattgcATTAAAATGTGATCAAAATGTAGTAGATGTAACTGGCGAAAAAAAGTTGTCAGGTGAAAAGAAAACCATATTCCAACCAAGAAAACCATTTTTACCAAAAGTTAAAGAACGTAAAACAGTAATTCCTAATGCAAATGCATTTTCTCcagaaaatgaaagtagtGTTTATGCATTTGAAAGTGATACTGAAATTCCAGTTAATACTCCATTTAGACGTAAAGTTCGTGAATCTACCAGATCAAACATGGCTATTGCTTTATCTGAAAGTAATGAACAAAAAGCTGAAAGTGATAcaattaaatctgaaaataatacaaataagaATGTAGAAAAGATAATCACAGATGATTGTGAGATAAccgaattaaaagaaaattccaatACTGTCCTTCTACCAAAAGAAAGTGAAgcaattgaaacaaaaaatgtacCAAATGCAACactaaatataaacaaatttgaatTACCTAAAAATTTCGCAACATTAGCTAATATACAAGTTCTACCATTGGATAAGTTAACTACAACTTGGAGTAATGTAAATTGTAGTGCTTCAATTGCTGTACAAGTAAATCTTGATGATAATGCACAGTCACAAGAACATGGAAGAGAAGGAGATTCAAATCCACATAAAAGTACAGAAATATCCACTCAAACTGAGAGTAATAACGAAAATGACGATGAGAATGATGGTCAACTATTTTATATACCATTACAAGCTGTTACAAGAAATGGACCAAATTTAGTTCAAGGTCAACAATTAATTCAAGGTGTAGCTGTTAAACTTGGTACCGAAGGACCAACTGGACCTAATCAGAAAGTTCTTTTGAGAGccaaattagttacaaaacCTCCTGCGTCTATTGCGCGTTGTCCTCCTGTAGGTACGGTGCAACCTACAACTCGTACACCACCGAATTCTACTTTTATAACAACAGATCACTCAACACCATCTACCTCTTCAAGTGCAGCTTCAATTATCACTGCACCTATCCCCGAAACTCAATCATCTTCTCcatgtaaaaatgaaaacgtaatACAAACTGTAAACAGGCAAAACATTGGGATTTTATCAAATGTGGGAACAGAAAAATTGACGAAATCTCCGAAAACTTctagagaaagaaaaacatctattgattcaaataaaaatgggaaaagGTgtcaaattaaatcaaaacaGAAAAGTTCTGAAGTTTATTCTCCGTCTAATAATGTAACATTTCCAAATGCAAAGGATGTAAATAGTGAAGCATGCTTAGTCGAAGCTCCAACATTTCATCCTAGTGAGAAAGACTTTCAAGATCCTCTAGAATATATAGACAAAATAAGACCAGTTGCAGAGAAGTTTGGAATATGCCGAGTTGTACCACCACCcaattttaaaCCGGAATGTAAAGTATCAGATGACATGAGATTTACTGCTTATAACCAGTATGTGCATCGTATGCTTCATAGATGGGGTCCTAATGTGAAGGAAATGATggctataaaaaaatacttggcCACGCAAAGCATAACACTAACTCATCCACCTTGGATTGGTGGCATGGAAGTTGATTTACCTCATCTATATCAGACAGTTCAAAGTTTAGGTGGATTAAAGGaagttattgaaaagaaaaaatggcaAAAAGTAGCTGATGGTATGAAGATACCAAAATCTGCCCAAGATCGTGTAACCAAATTAGATgacatttattgtaaatatttactaCCATATGATACGTTGTCTCCagAGGAAAGAGGCAAGTTATTTGATGAAGTTGAATCTGAatggataaaaaaagaaagcaaagcTTTACAGAGGCAAAACGCACCAGTTactgaaaatgaagaagatgaagatgatGATAGTTctgatgaaattgaagagtGCATTGTAAAAGGTAGAAATATGCCATTAAATGCTTTTTATCGTATCGCACGAAACACACAACGTATGTGGTTTGGTGAAAACCAACGATCTGGAAATGAAGCTGAAGGTGCTTCTGCTGATGAGGTTGAAAGCGCATTTTGGAAACATGTTGCAGAAAGAAAACGGCATGTCTGTGTACATGCTGCAAGTATTGATTCAAGTGGTCGTGGGTTTGGATTTTCTGTTGCTAAAAATAGTCCATTTGCAAGACACCCGTGGAACCTTAAAGTACTTACTAATAATGCTGGATCAGTATTACGCGCTTTAGGCCCAATAATGGGTGTGACAGTACCAACCCTTCACGTGGGCATGTTATTCAGTGCTTGTTGTTGGTACCGCGATCCTCATGGTCTTCCCTGGATAGAATATTTGCACACTGGTGCTAAAAAAATTTGGTATGGTATACCAGATGAACACAACAACCATTTCAGAGAAGCACTATCAAAAATGGTGCCGcgttattgtaaaaataagaCTATATGGTTACCATCAGATACAGCCATGGTTCCTCCAGAATTGTTAGTTAGTAACGGAGTGTCATTATGTCAAACTGTACAAGAACCAGGgcaatttataattgtatttccTAAAGCATTTACATCAAGCATATGTACTGGTTACGTGGTTTCTGAAAGTGTTTACTTTGCACAACTCTCGTGGCTAGAAACTGCGGAACAAGTATTTAAAgaCATACAAGATAGCTGTGAACCATCGATCTTTTCATTTGAgagattattattcaatattattaatgattctAGATCTCATATAGAAGTATTAAAACAGATTCTACcaagtgtaattaaaattcgtgaaaaagaaataagttaCCGAAAACAGTTAGTATCAGTGGGTTTAATAAATACGGAAAGATTACCTCTGCCGGATAGtggaaaacgaaaaaaagggaaaaaagtgaaagaggATGATGGTGATTTTGAATGTGAAATTTGCAGAGCTAATCTATTTGTTTCATTGATTAGTAATTCCCAAGATGACAGTATTTACTGTTTACCACATgcattgcaattatttaacaagaaaaagcaagttttaaaacattgtactttaatgtatacatacaatgagGATGAATTGGACGACTTAATTCATAAACTGGGAGAGAGAATTGAAGCCAAATCTAAAAAGACTAATCAAATCAAACAGACTAAGTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGATNVFNPSHTPIKDKEKAKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGNKKEKPEPKPLRASTDKAICSSTTSSENQKSDSSQKIVTKVKPAINDKKKVSGSIQKNITTFKSATSTVQALKKKYQEQRLAKQRIKNKFKTSCVMRTRSCTERTMLKSTNQLPPRKFLPRIETKRLGLRSSVLADKTKKTSPKVKSAPPKPKKKVIAKQNSSDTSTSESTSEDEEEEGPSEKSVSQIKRTAQKNVQKNICTRSKSEMRRITRSHSGTVSPKNLCRRPTRKTKEAAAVYMEILGRKLISPDLENDDNVSMDSFPELPNARKSAQTENEVKTKAKQSVSKPVTKNKDGKITGIHSVSNKRLDKTKVSKIAFKSKRLIRVQKYCEIDSDEESVSSSNDTSNTKPVTRRSLGKLNKPTSRYLRSSTKKVVTRIEVQNNVNIKSKSQVQNNLRFNKEKFVIKRKREQNFSKSSPEKGGELKQKEGKIQNNAHDITDSDEETLGMLLNKLKRKKDDPPPNEEISPNNNNSSSNNNNNNNNNNINNNDNSNCDVIDKVEHSLDENSVKVDLSKVSDDEESFRGFTKKTISKVLNSCQTHANANLLVTEKSTDTSKTTNTEDVKDSDASNQQENKELINNDPCLHKTSPTTSVPNNQSVQSERIQKTKLEFTKHIEKECHHKPEMSGNDVDMSLSTLHVRKEKVNMSTEQIEKWLNESSFAKEESKLEMENVSAFKYDVCEKKTDVSHLSISTKIQHLVRPVNVTLSKLAEKANAKDRMNMQNKCISITTMDVKSIDVKQENEITIVNKNTAELKDINKTRNVKSNKDSCAGEENDIALKCDQNVVDVTGEKKLSGEKKTIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESDTEIPVNTPFRRKVRESTRSNMAIALSESNEQKAESDTIKSENNTNKNVEKIITDDCEITELKENSNTVLLPKESEAIETKNVPNATLNINKFELPKNFATLANIQVLPLDKLTTTWSNVNCSASIAVQVNLDDNAQSQEHGREGDSNPHKSTEISTQTESNNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPTGPNQKVLLRAKLVTKPPASIARCPPVGTVQPTTRTPPNSTFITTDHSTPSTSSSAASIITAPIPETQSSSPCKNENVIQTVNRQNIGILSNVGTEKLTKSPKTSRERKTSIDSNKNGKRCQIKSKQKSSEVYSPSNNVTFPNAKDVNSEACLVEAPTFHPSEKDFQDPLEYIDKIRPVAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESEWIKKESKALQRQNAPVTENEEDEDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPIMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNHFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQLSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDSRSHIEVLKQILPSVIKIREKEISYRKQLVSVGLINTERLPLPDSGKRKKGKKVKEDDGDFECEICRANLFVSLISNSQDDSIYCLPHALQLFNKKKQVLKHCTLMYTYNEDELDDLIHKLGERIEAKSKKTNQIKQTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01122223;
- 90% Identity
- -
- 80% Identity
- -