Olig003038.1
Basic Information
- Insect
- Osmia lignaria
- Gene Symbol
- Xbp1
- Assembly
- GCA_012274295.1
- Location
- NW:875288-898644[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-15 2.5e-12 45.8 15.9 2 61 75 134 75 144 0.95
Sequence Information
- Coding Sequence
- ATGAGCGTACTGAAAAGCGTTATCATCACTCTGCCTAAGGGCATGTCGAAGGCACCTGGCGTTATCTCGATTAACGACTTACCAAAAACTGTgccgaaattcaattttacatcTGCTTTGAATGATAAATTGAAGATGGAACCGAAGAAGATGATTAAGCACGATGAAATTCAGGATGTTTGTGTCCGTGGAAAGAAACGACGACTGGACCATCTAACCTgggaagaaaaattgcaaagaaagaaattaaaaaacaggGTAGCGGCTCAAACGTCTCGGGACCGGAAGAAAGCTAAACTCGACGAGTTGGAAGACACTGTTAGGACCTTAAGGGAACAAAATGAATTGTTATCGCAGGAATGTGCTATGCTGAGGTCGCAGAACGAGTTGTTGGTCACTGAAACAAAAAGGATaaggaaggagaaagaaggaaaaaaatcgGAAGAATTCGTTTGCTCCATGTGCCAGAGTCGTGTCGGCTGTGCTGTATCCTCGCTGGGATCTGCAGTATCCCCCTCTCACCCTCTGCAGCAGGGTGGAACAATACAGCTGGCACCGTCACTGACGCTAACCCCAGGAGCAGCAATTCTTCTGAAGATACTGACCATCTACCTCCTCTTGAAGAACTGTTTGGCGACCTCCAAGGAGACGATTACATCGAACGACTTGAAGAACTTGCAGAAAGTCTTCTGCGAGAAGTTACCGCCGAAGTGGAAGCAAATTCTAATAGAACAAATGAACAAGTGTCAGTCAAGGAAGATACCGGTGAGAAACGTGACAATTCAAAAGGAATGGTGGGGCAGGCATCAAAAGATGTGGAAGCCAGTAGAACCTGTAGAAGCCTAA
- Protein Sequence
- MSVLKSVIITLPKGMSKAPGVISINDLPKTVPKFNFTSALNDKLKMEPKKMIKHDEIQDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRTLREQNELLSQECAMLRSQNELLVTETKRIRKEKEGKKSEEFVCSMCQSRVGCAVSSLGSAVSPSHPLQQGGTIQLAPSLTLTPGAAILLKILTIYLLLKNCLATSKETITSNDLKNLQKVFCEKLPPKWKQILIEQMNKCQSRKIPVRNVTIQKEWWGRHQKMWKPVEPVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070809;
- 90% Identity
- -
- 80% Identity
- -