Obic006394.3
Basic Information
- Insect
- Osmia bicornis
- Gene Symbol
- kn
- Assembly
- GCA_907164935.1
- Location
- NC:1836961-1906946[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-232 3.2e-228 759.2 0.1 39 455 20 434 15 444 0.94 2 2 0.043 3.5e+02 -0.4 9.5 444 514 457 527 446 545 0.66
Sequence Information
- Coding Sequence
- ATGAGGCAGATACTCAAGGAGGAACCTGTGCCACGTGCTTGGCCACAGCCCGCGCTAGCCGACAACGGAACAGTCGGAGTCGGCAGAGCACACTTCGAGAAACAACCACCAAGTAATTTGAGGAAAAGTAACTTCTTCCATTTCGTGATCGCTCTCTACGATCGACACGGTCAACCGATCGAGATAGAAAGGACCTCCTTCATGGGTTTCGTCGAAAAAGATCAGGAATCCGAGGGTCAAAAGACGAATAATGGGATTCAGTACAGCCTGCATCTGCTTTACTCCAATGGTGTCAGACAGGTGCAGGATATCTACGTCAGGCTCATCGACTCTGCGACCAAACAGgcTATCATGTACGAGGGACAAGATAAGAATCCTGAGATGTGCAGGGTCCTTTTGACTCACGAGGTGATGTGCAGTCGGTGTTGCGATAAGAAAAGTTGCGGGAACAGAAACGAAACACCCAGCGATCCTGTGATCATCGATCGATTCTTCCTCAAGTTCTTCCTCAAGTGCAACCAAAACTGCCTTAAGAATGCCGGCAATCCCCGCGATATGAGACGCTTCCAGGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGACCACTACTGGCAGTCTCGGACAACATGTTCGTTCACAACAACAGCAAACATGGTCGTAGAGCGAAACGATTAGATCCCAGTGATCCCGGCGAATACAACAGTCTTTATACGCCTGTACCTCTCCAAACACCGTGCATAAAAGCGATATCACCGAACGAAGGATGGACTTCTGGTGGATCCACGGTTATAATTATCGGCGAAAACTTCTTCGATGGGCTTCAAGTAGTTTTTGGATCGATGTTAGTTTGGAGCGAGTTAATCACACCGAACGCAATCAGAGTGCAAACTCCTCCGCGACAGATACCTGGTGTAGTCGAAGTCACGCTTTCTTATAAAACTAAACAGTTTTGTAAAGGAGCACCCGGAAGATTCGTTTATGTTTCCCTAAATGAACCCACGATCGACTACGGCTTCCAAAGGTTACAGAAACTTATTCCCCGACATCCTGGCGACCCAGAGAAATTACCGAAGGAAATCATACTGAAAAGAGCGGCAGATCTCGCAGAAGCTCTGTACAGTATGCCCAGAAGCGGAAACACAGGGATCACAGGAGCACCTAGGAGTCCAGGATCGGGTCATCCGCCTGCACCTCCGACATCCAGCTCGGCGACGGCGTTCAATTCGTATACAGGACAACTCGCAGTGACGGTACAAGAAAATGGCACTGCCGCAAAATGGACGGATGACGGTAGTTCCGTGACGACAGGAGCCGGTGCTGGAGGCGGTGGCGGCGGTGGTGGTAGCGTAGGAGGAAGCGTCGGTGGTAGCACTGACGCGTATAGACAAAGCAGCAGTGCGAGTCCACGTGGGGTCGTAACCGGTGGTGGTTATTGCGGAAGTTCAGCCAGTACACCTCACAGTCACAGCACAAACGGAAGTTATTCAGTGGCCAATCCGTATACTGGTAGTCCGACTCTTTATACATCACGACTAGGGGAGGTGGTTGGTTCACCGTTCAACATGAATCCATTTATGTTGCCGACCTGCAGCCAAGGATATTCGAATGCCGCCAGTCCGTTGCTCTCGTCGAATGGGAAATAG
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGVRQVQDIYVRLIDSATKQAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNTGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGTAAKWTDDGSSVTTGAGAGGGGGGGGSVGGSVGGSTDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSRLGEVVGSPFNMNPFMLPTCSQGYSNAASPLLSSNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879410;
- 90% Identity
- iTF_00142224;
- 80% Identity
- iTF_01122825;