Osur000262.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- stc_1
- Assembly
- GCA_004796505.1
- Location
- SSSI01006903.1:7627-10907[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.7 1.6e+04 -3.9 3.0 6 10 229 233 225 233 0.61 2 16 0.12 1.1e+03 -0.2 0.3 4 10 259 265 258 265 0.94 3 16 7.5e-06 0.069 13.2 13.5 4 19 274 289 272 289 0.93 4 16 1.3e-07 0.0012 18.8 10.6 1 19 325 343 325 343 0.98 5 16 2.3e-08 0.00022 21.2 12.7 1 19 383 401 383 401 0.98 6 16 1.3 1.2e+04 -3.6 0.9 1 4 412 415 412 415 0.97 7 16 5.6e-08 0.00052 20.0 12.5 4 19 448 463 441 463 0.87 8 16 1.2 1.1e+04 -3.3 2.0 5 10 492 497 492 497 0.93 9 16 0.0023 22 5.3 8.6 1 11 503 513 503 515 0.96 10 16 0.99 9.2e+03 -3.1 1.0 4 10 518 524 517 525 0.63 11 16 4.8e-07 0.0045 17.0 19.1 1 18 530 547 530 548 0.97 12 16 2 1.9e+04 -4.2 1.5 6 10 577 581 577 581 0.87 13 16 0.00066 6.2 7.0 15.1 1 19 587 604 587 604 0.94 14 16 2 1.9e+04 -4.5 2.7 9 18 622 634 622 635 0.53 15 16 1.8e-07 0.0017 18.4 16.2 1 19 640 659 640 662 0.97 16 16 1.1e-05 0.1 12.7 15.3 1 18 669 687 669 688 0.91
Sequence Information
- Coding Sequence
- ATGTCGTTCAGTAACGAAAGTCAATCATTTAACAACAATCCTCGACCAACAACGGCTTTCACTCAATACCAAATAACAAATTCCACGTTAGAACCGTCAGCACCCGAATTTCGACCATCGAATCAAGTTTCAACCGGTGCCGTAAAAAGAAAACCCCAAAACACGAACCGACGCAATAACTACTATGGCAGTGGAAGAATTTTCAATGGATCAAGATACGAGGAACCAGATGGTGACAATAGTCGCAATCCGAATGAAAATCGACGATATGAAAATCATCAATATAAACGATATGAAGAGAGGAGTTACAAAGCAAAtcgaaaaaattacaatacgtATGAAAGAAAAGAtgaatcaatttattataacaacgAAAAACGGGATCATGTCAAGTATTATAATGGTAAAAAGTATGCAAATCAAAGGAATTGGAGAAAATTCCACAATACACCGAATGGAAATttaagaaacaataaaaaatgtaatggaAATGCGGCTTCGCAACGTGAGCGTTTAGAAGATATGTTGAATCGTCGTAAATTGGAATGTTTAGTAtgttgtgaaaaaattaaaaatagcgATAAAATATGGTCATGTATTCAATGCTATAACATTCTACATTTGGACTGTACAATAGCGTGGGCAAAATCATCACAAATCAATAATGGTTGGCGTTGTCCAGCATGTCAAAATGTCTGCATACAAGTACCACTTCAGTATTTCTGTTATTGTGGAAAAATTACTGATCCAAAATCAGATAATGGTGTAATAGCACACAGCTGTGGCGAGATTTGTCTACGAAAAGGACGTACATGCGATCATAAATGTACGATTTTATGCCATCCAGGCCCTTGTCCCGATTGTACTGTAATGGTATCAAAATCTTGTGCTTGTGGCGTAACAGAATCacaattaaaatgttcaaCTGACTTGGAAATGGTTTGTGataatgtttgtaataaattgttaacgTGTGGATTACATAAATGTAGTAAAAAATGCCATTGGGACGATTGTCCACCATGTTCGGAAACAGTTCAACAGGAATGTTATTGCGGTAAAGTTGGAAGACGTGTTAAATGTACCGTCGACGTAAGCGGTATCACTTCGTATTCTTGCGGTGAaacttgtaataaattgttaagtTGTGGTAATCATAAGTGCAGCGAAATATGTCATGAAAATGAATGTAAACCGTGTtcaaatgatattaatttaataaaaacatgtcCGTGCGGTAAacattttttggaaattgaaCGAAAGTCGTGCTTGGATCCAGTGCCTTGTTGTGGAAAAGTGtgtggaaaatttttaaaatgcgGCCAACCAAATATTCCTCATAAATGTGAAGAATTGTGTCATTTAGGCGATTGTCCAACTTGTCCAAAAACAACATTAGTGCGTTGCCGTTGCGGACATATGGATAAAGAATTGCCTTGCAAAGATTTGGTCAGTAAAGCGGATGATGCAAGATGTgagaaaaaatgtacaaagaAACGATTGTGTGGTAAACACAAATGCAATCAACGTTGTTGTATTGAAATTGATCATGTTTGTCCATTACCATGCACCCATCAGCTTTCCTGTGGCCAACATCGTTGTCATTTAACTTGCCATCGTGGCCATTGTCCACCATGTTTAGAAACCAGCTTCGATGAATTGTATTGTGAATGTGGTGCCAGTGTTATTTATCCACCAATACCGTGCGGCACAAAACCACCTGTTTGTAATCAACCCTGTGTCAGAGAGCGTGTTTGTGGCCATCAATCAAATCATACATGCCATACTGGCCAATGTCCACCATGTACTATATTATGTAAACGCTGGTGTTACGGAAAACATGAACAACGTTCAGCGATACCATGCCATCAGCAAGAATTCAGTTGTGGTTTACCATGTAATAGAAATATGCCATGTGGTAGACATAAATGTACGAAAGCATGTCATATGGGCGATTGTCCATTGCCATGTAAACAACCATGTACACGTCTAAGGGAATTATGTGGACATCCGTGTGCGAAACCATGTCATAATGGACCATGTCCAGAGAGTGTTTGTAAACATATAGTACCAGTTACTTGTTTATGTGGTTTACAAAAATCCACAAAACCCTGTGTTGATTTAACAGCTGAATTTCGTAATATTGAAATGGAAcaaattaaagataaaattgGGGATCTAAGTAAGGGGAATACAGTAGATATTAGTGATGTAGGGAAAGTTAATAAACCAACTGTTTTAAAAGTattGGAGTGCACAGAAGAATGTAGAATTTTGGAACGTAATCGTCGTCTTGCAATTGGCCTACAAATACGCAATCCAGACTTAAGTCAGAAATTAACACCACGTTATTCAGATTTTATGCGTACATGGGCGAAAAAAGATCCACATTTCTGTCAACGTGTACACAATAAATTAACGGAATTAGTACAACTAGCGAAACAAAGTAAACAATCTAGTCGAGCGCATTCGTTCGAATCGATGAATCGTGATAAAAGACGTTTCGTACATGAATATTGTGAACATTTTGGCTGTGATAGTGCCGCCTATGATAGTGAGCCGAATCGTAATGTTGTTGCAACAGCAATTAAAGATAAATCGTGGTTGCCTAGTATGAGTTTAATGGAAGTTATACAACGTGAAAATGGTCAACGAAAAGTTCCTGGGCCCATTTTAAGTAAAAGTTCAGCAGGTAAATCGGAAACAGTGACGTTAAAATTACCTGGACGCAGTATTCAACACGTTAATACGACACCTGTTGGTGAAACTGTTGATTATTATGATCCTGTGTAG
- Protein Sequence
- MSFSNESQSFNNNPRPTTAFTQYQITNSTLEPSAPEFRPSNQVSTGAVKRKPQNTNRRNNYYGSGRIFNGSRYEEPDGDNSRNPNENRRYENHQYKRYEERSYKANRKNYNTYERKDESIYYNNEKRDHVKYYNGKKYANQRNWRKFHNTPNGNLRNNKKCNGNAASQRERLEDMLNRRKLECLVCCEKIKNSDKIWSCIQCYNILHLDCTIAWAKSSQINNGWRCPACQNVCIQVPLQYFCYCGKITDPKSDNGVIAHSCGEICLRKGRTCDHKCTILCHPGPCPDCTVMVSKSCACGVTESQLKCSTDLEMVCDNVCNKLLTCGLHKCSKKCHWDDCPPCSETVQQECYCGKVGRRVKCTVDVSGITSYSCGETCNKLLSCGNHKCSEICHENECKPCSNDINLIKTCPCGKHFLEIERKSCLDPVPCCGKVCGKFLKCGQPNIPHKCEELCHLGDCPTCPKTTLVRCRCGHMDKELPCKDLVSKADDARCEKKCTKKRLCGKHKCNQRCCIEIDHVCPLPCTHQLSCGQHRCHLTCHRGHCPPCLETSFDELYCECGASVIYPPIPCGTKPPVCNQPCVRERVCGHQSNHTCHTGQCPPCTILCKRWCYGKHEQRSAIPCHQQEFSCGLPCNRNMPCGRHKCTKACHMGDCPLPCKQPCTRLRELCGHPCAKPCHNGPCPESVCKHIVPVTCLCGLQKSTKPCVDLTAEFRNIEMEQIKDKIGDLSKGNTVDISDVGKVNKPTVLKVLECTEECRILERNRRLAIGLQIRNPDLSQKLTPRYSDFMRTWAKKDPHFCQRVHNKLTELVQLAKQSKQSSRAHSFESMNRDKRRFVHEYCEHFGCDSAAYDSEPNRNVVATAIKDKSWLPSMSLMEVIQRENGQRKVPGPILSKSSAGKSETVTLKLPGRSIQHVNTTPVGETVDYYDPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -