Basic Information

Gene Symbol
RERE
Assembly
GCA_004796505.1
Location
SSSI01010467.1:18193-27244[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-08 3.3e-05 23.4 4.6 1 34 253 286 253 288 0.92

Sequence Information

Coding Sequence
atggcAACCACTCAAGGAGAAATTAGGGTGGGTCCTGGAAACCAGGCACGTTTACCTGATTATCGACCAGCTATACCACCAGAACAATTATCACCAGATCCAGAACAATCACGTACTAGAGAAGAATTAAGATGGGTGCCAGCAATGACATTAGATTCggatttattaatgtatttgcGTGCTGCAAGATCAATGGCAGCATTTGCAGGTATGTGTGATGGTGGTTGTCCCGAAGATGGTGCCAATGCAGCGTCCAGGGATGATACAACCATAAATGCACTCGATGTGttgCACGATTCCGGTTATGATCCTGGGAAAGCATTACAAGCACTTGTAAAATGTCCAGTACCAAAAGGAATAGACAAGAAATGGAGTGAAGAGGAGACTAAAAGGTTTGTTAAAGGTTTGAGgcaatttggtaaaaatttctTCCGTATACGAAAGGATTTGCTGCCTCATCGCGATACAcCTGAATtagttgaattttattatttatggaaGAAAACACCTGGTGCAAATAATAATCGACCACATAGAAGACGACGTCAAGGCTCATTGAGGAGAATTAGGAATACAAGAAATAGTAGAGGAGGTAATACTTCATCTAGTGCAGGACGCAATAGTGGAAATACAGCCCAGGAACCGGAAAACAATCGACCATCACCACAACCTGGCAAAGAACCAGGTGAAACAAGTTCTGTTACAGAAGATGACAATTCAGAAGATGACAGTGATAGTAGAGAGGCACAATATAGATGTTCGCATTGTTTTACAACACATTCAAAAGATTGGCAACCGGGTGGAAAAGATCGTCAAATATTGTGTTGGGATTGTAGGACtcattttaagaaaacaaaTGAATTGCCATCacttaataatagtaataatgcACAAACAACAATTGTAAATACAGCTGAAAGTCCAGATGCAAGTCCACAACGAATGCGTACAAGAAATAAAGCTGCAAAAGAGCAAAATACGAATCGATCCCGGCCGAAACGTGGCGGTAATGAAACACCAGAACCAAAAACACcaatcaaaacaaataataatgacaAATCATCATCAGCCACAACACAATCAAATACAACTCCTGGTAAAAAGAAAGGTAGTAAATCTGATAGTAAATTAGATACACCGAATAAAAATAGGAAACGTCAACAAGAGAAAACTGATGAAAATGATGTAGATGAAAAAGATCTGACTGTGTTTAAAAAGAAACGTGAACGAGCTGAAAGTCCATCGAGTGTTACTACTGATTCAGGTTCGATAAATGATGATATGGAAACAAATGAAGCACCAGAAGCTGATAGTACGGATAGTACTTCATTGCCAGCTACCACAACCAGTTCCACGCCAACGAATTTCTCGTCAGCATTAACCACTAGTAATAGTAATGCTAGTATAAATGATATTAATGCTAAAACTAGTGTTAAAATGGAGAGTGAATCTGTTGTTGTAACGTCAACGAGTGCATCAGTGATAAATAAAGCGACTGAATCCGTTATACCATTGATTAAATCATCAAATGAATCAGCAATGCCGTTGAATGTGTCTATTCGATTACCGGATGATTTGAATGaaaggaaaaatttaattaaacgtaATTTAGATACATCAATGGatgtaaaatataatccaGATGTTAAATTCAATCCACAAGAAGTGAAAAAGGAACAACAAGTTAAACAAGAAATGAAAGTtgagaaaattgaaatgaaagatGAACCAACAGAGaaatttaaaactgaattaaTTATACCAAAAGTTGTAACATTGGATAAAGCAATGATAAAAGAAGAAATGGATTCAAGTAATGAAGGTATTAAAGATGAAGTATATAAAGACAATATTTTCATACCACAAAATTTAAATCCGATgcctaattttaatataaaagaaccGTTGTTAAATCATAATAAACATACGGCGTTGAATTTAAAAGAACCACAAATTGAACGAAATAAAgagcaaattttaaatatgaatcatTCATCGTATTTAAAACAAGAACCTTCTTTTGGTTATAATAAAGAACAATCAACTccaccaacaacaacatctATATCCTCGCAAACTAcatcacaacaacaacaacaacaacagcagcaacagcaacaacCGATTATTAAAGTAGAGCCACGTGATGAACCGATGGAATTAACTAGTCAAAGTCGAAATGATTATAATTCTCCATTAAATATACCAACAATTATTCCAATGTCACAACAAATACCAGCCAATACTCGTGTAACAAGTGACAATCAATATgatgaagaaaataaaaaattagaaagGCCTGAACGTGTCGATCGACCCGAATTGCCACCAATAAATGCACCATCGATTGGCCAACCACCGTTACCAAGTTTAATGCAATCTAATAATTTGGTTACAATTGGTGGCGGTAATTcacaaccaccaccaccacctatTGGCCATTATGGATTCATGTATAATCCACAATCGCCAAGGAATATGGAGAAGAATTCAACTGCACCAGCACAATCAGCAGTTACTGCTCAACCATCACAACAACCACCGCCTCTACCGCCGCCCCCGCCAAGTCAAAACGAGccgcaaaatttaaaaataaaacaagaagtgcccgaaacaacaacaaatcatTTAAGCGGTTTGGCATCATTCACACAAAGTTTACCTAGTGGTCCATCAGTGCCATCAAGTGGCAATTTTGTACCACCATCACCTAGTCATTTACAAGCCACACCAATAGCGGATCCATTACAAAGTTTGAAAGATGTTAAAGTGCCCGGTTATTTGCCACCAccgccatcatcatcatcgtcatctGAACGTGAACGTCCGCCATCTGAATCGTCATCGTCGaatgttgaaattaaaaaagaaccAGAATATAATAACAGCAGTAATAGTGGTAGTTCACAAATCAGTAATCGTGCTAGTCCAGCACATAGTAATTCGCAAGAAAAATGTACAACACCGAAACCACCAACACCAATTGTCATTTCACAAACACCACCATTACGTCAACCAACAAGTTCACCACATTCGGCCATAAATTTGATAAGTTCCAGTACTGGTCCACCAACCAGTTTACCGCAACCGCATCCATCACAAGCGCATGCATATCCCACAGCTATGCCACCACCACACCATTTAATGCATCCATCATTTTTGCATGCAATGCATCAATTCCATAGTAATCCGTATTCTGGTTACCATTTCTCTTATCCATATCCATATCCGGTACCACCACAGCCACATGCCATCCCACCGCCCACATCACGGCCAGACATTTGTCCACCAAAGTCGATTGACACAGTAAGTGCTACTGTTATGTCATCACAACATAGTACTAGCAGTACATTGACGACGAAACGTGAAACTAGAGAACCAGATGAAAATGGTGCTGAAAGACATCAAACACACGAAATGACATTAACACATCATCAAAGTACATCACATAATAGTACGGTGCATGCTAGTGTcgataaacaaaattatggtGGTGGACATTCGATAACTATATCACATTCAACTAGTACAAGTTCAAGTCAGTCTGTACAACATAAAGTCAATCATAAAACTGTTCGGACTAGTTCACCACATACACCAATATCGCAGaCTTCTACTACTACGAATATTAATCATTCATCGTCGTCATCATCCAGCAACCACCAACATACACACCATCACACCCATCACCACGACAGATTGTCACCAGGTAATCAATTAATGCGTCACAGTCACAGTTTACATGGTAAACCGAATCCACAAACGAATCCACATCATTTAATGATCCAACCACCAAACATGGGCCATCATCCACCGCCACTAGGTCCACCACCAATTGGTAGCAGTTCATTGGAAGCGTTACGTGCACATGCCGCTCAAGCGGCAGCGAACATGCAACAAAATAGTATGCACCATCATCAACCAAGTACATCACCAATGAATCCACCAccacaaacaacaaaattaatttccgATGATGTGGTAAAAGTGGAACAAGATCCGGTGCCATCACCAGAAGAAGAGGGTCAAACAAGTCCAATTGGACCACCTAGAGGGCCATCACCTGAGCCACGCATTGAGGATACTGAATGCCATCGCAGTCAATCGGCAATATTTTTACGACATTGGAATCGTGGCGATTATAATTCGTGTACACGAACTGATTTGACATTTAAACCAGTGCCTGATTCGAAATTAGCTCGAAAACGTGAAGAACGTCTACGTAAACAAGCTGAAAGGGAACGTGAGGAGCGTGAACGTGCACAACAAGCGCAAGCCAGAAAAATTACAACACCCGAAAAACCGGAAGTCAAACCGCCATCAAGAGGACCATTGGAGAATGTTGGATCGCCGTATGAACGATTCAGTAGGCCTGGATTTACGGATACACCAACGTTAAGGTTGTCCGAATACGCTAGACCGCATGCTGGCTTCAGTCCAGgaCATATGCCAAGATCATTGATTCCTCCAACACAACTAATGGATCCGATAATGCAGTATCAATTAAATAGTATGTATGGACCTGGTGCACGTGAACGTCTCGAATTGGAACATTTAGAACGTGAGAAACGTGAACGAGAAATACGCGAATTGCGTGAACGCGAATTAAATGATCGTTTGAAAGAGGAGATTATGAAAAGTGGTATGCGTGGCCCACCAAATGCTGCCATGGATCCACATTGGTTGGAATTGCAAAGAAGATATGCTGCAGCTGGTTTAGCTGGTCCAGGACCTGCAGGTCTTCCATTACATCATTTCCCATTGTATACTGGAGCCGGTGGTAGTGCACAATTGTCGCAAATTGAACGTGAACGATTAGAACGATTAGGtataccaccaccaccagGTGCACCAGGTGGTCCTGGTGGTCCACCACCCGGCCATCCACACCATCCGTCACATGCGGCACAATTAGAAGCTGCTGAACGATTGGCATTGGCAACAGATCCAATGGTGCGTTTACAAATGGCTGGCATATCGCCAGAATATCACGCCCATACACATGCCCATACACACGCCCACACACACCTACATTTACATCCACAGCAACAACAAGCACAACAAGAGGCGGCAGCCGCGGCGGCTGGTTTTCCTCTTCCAGctTCTGGAACGCCCGGTTATCCACGTCCTGGTCTAATACCGGGCCGAGACGGTCCATTAGGTCTGCATCATCCCGATTTATTAAGTAGACCGTATTCTGATCAGTTGGCACATCAGGCTGCGGCACATGAACAATTGCAGAGGCAGATGCTGTTAGAAAGAGATAGATTCCCACCACATCCTTCGATTGTTGCCCAACATGAAGAGTACCTAAGGCAGCAAAGAGAACGAGAACTTAAAGTTAGAGCGCTAGAAGAAGCGGCAAGAGGTTCTAgaccataa
Protein Sequence
MATTQGEIRVGPGNQARLPDYRPAIPPEQLSPDPEQSRTREELRWVPAMTLDSDLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRGGNTSSSAGRNSGNTAQEPENNRPSPQPGKEPGETSSVTEDDNSEDDSDSREAQYRCSHCFTTHSKDWQPGGKDRQILCWDCRTHFKKTNELPSLNNSNNAQTTIVNTAESPDASPQRMRTRNKAAKEQNTNRSRPKRGGNETPEPKTPIKTNNNDKSSSATTQSNTTPGKKKGSKSDSKLDTPNKNRKRQQEKTDENDVDEKDLTVFKKKRERAESPSSVTTDSGSINDDMETNEAPEADSTDSTSLPATTTSSTPTNFSSALTTSNSNASINDINAKTSVKMESESVVVTSTSASVINKATESVIPLIKSSNESAMPLNVSIRLPDDLNERKNLIKRNLDTSMDVKYNPDVKFNPQEVKKEQQVKQEMKVEKIEMKDEPTEKFKTELIIPKVVTLDKAMIKEEMDSSNEGIKDEVYKDNIFIPQNLNPMPNFNIKEPLLNHNKHTALNLKEPQIERNKEQILNMNHSSYLKQEPSFGYNKEQSTPPTTTSISSQTTSQQQQQQQQQQQQPIIKVEPRDEPMELTSQSRNDYNSPLNIPTIIPMSQQIPANTRVTSDNQYDEENKKLERPERVDRPELPPINAPSIGQPPLPSLMQSNNLVTIGGGNSQPPPPPIGHYGFMYNPQSPRNMEKNSTAPAQSAVTAQPSQQPPPLPPPPPSQNEPQNLKIKQEVPETTTNHLSGLASFTQSLPSGPSVPSSGNFVPPSPSHLQATPIADPLQSLKDVKVPGYLPPPPSSSSSSERERPPSESSSSNVEIKKEPEYNNSSNSGSSQISNRASPAHSNSQEKCTTPKPPTPIVISQTPPLRQPTSSPHSAINLISSSTGPPTSLPQPHPSQAHAYPTAMPPPHHLMHPSFLHAMHQFHSNPYSGYHFSYPYPYPVPPQPHAIPPPTSRPDICPPKSIDTVSATVMSSQHSTSSTLTTKRETREPDENGAERHQTHEMTLTHHQSTSHNSTVHASVDKQNYGGGHSITISHSTSTSSSQSVQHKVNHKTVRTSSPHTPISQTSTTTNINHSSSSSSSNHQHTHHHTHHHDRLSPGNQLMRHSHSLHGKPNPQTNPHHLMIQPPNMGHHPPPLGPPPIGSSSLEALRAHAAQAAANMQQNSMHHHQPSTSPMNPPPQTTKLISDDVVKVEQDPVPSPEEEGQTSPIGPPRGPSPEPRIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLTFKPVPDSKLARKREERLRKQAEREREERERAQQAQARKITTPEKPEVKPPSRGPLENVGSPYERFSRPGFTDTPTLRLSEYARPHAGFSPGHMPRSLIPPTQLMDPIMQYQLNSMYGPGARERLELEHLEREKREREIRELRERELNDRLKEEIMKSGMRGPPNAAMDPHWLELQRRYAAAGLAGPGPAGLPLHHFPLYTGAGGSAQLSQIERERLERLGIPPPPGAPGGPGGPPPGHPHHPSHAAQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPQQQQAQQEAAAAAAGFPLPASGTPGYPRPGLIPGRDGPLGLHHPDLLSRPYSDQLAHQAAAHEQLQRQMLLERDRFPPHPSIVAQHEEYLRQQRERELKVRALEEAARGSRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01121554;
90% Identity
iTF_01121554;
80% Identity
iTF_01121554;