Osur018355.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_004796505.1
- Location
- SSSI01002143.1:942-7163[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-17 1.1e-14 53.9 0.0 1 44 215 259 215 260 0.94 2 2 3.2e-18 1.7e-15 56.5 0.0 1 43 595 638 595 640 0.95
Sequence Information
- Coding Sequence
- AGTCCCCGGCATTCAGACTCTGAATCATCGGAGAGTCCCAGTGACAGTGAGGCACCACCATCATTGACACCCTCATCAAGccttaacaataatattatcaatagtaataataataatcaccATCATCATCCACATCACAGAGCCGGATCGGCGGGTGTACAACATCCGGTAACGCCGGCAAATATGACAACAATAGAAAGTGTCACATCGATGGCAGCATTGGCGGCTGTGGCGGCATTAACTGGTGGCAATTCACCAGTAACACCAGCACCCCATTTACCATTTTATGCaccaaatatacataattggTATTTAGCAAATATGGCAAGAACATTTcacacacaacaacaacaacaacaacaacaggaTGTTGGTGGTGTTGATAAGGTTAGTGGCGGAGGAGGCGGTGAACAACCCCTTGACCTTAGTAAAGGCGGTGGTTCCGGTGGTAATAATGCCACCAATATTGgtaatatacattttccaaCCAGTGGAACAAATATGGCTACTATTACGGGTACTGAACAAAAAATTGGTAACAATGTTAATGCCAGATTGCCAACATTGGACACCAAACACATATACAATTCTGATTTTAGAGCGAAGCCTAGAATGTCTGCGGTGGCTGGCAGAAGAACATACACAGAAGATGAATTACAAGCAGCTCTAAGGGACATACAATCCGGTAAATTGGGCACAAGAAGGGCAGCTGTCATATATGGTATACCACGTTCAACGTTACGCAATAAAGTCTACAAATTGGCATTAGAACGTGAACGTGAATCGCATCTAGTTAGTAATACACCATTAAAATTGGATGAGGAAGAGGTGATGGACGATGAAAAAGAATTATCCGGTGCGGAAGAGGAAAAAGAAGTGGAGAAAGCGTTACAAGGTCCATTAGTTACAATGGCCGATATAATGCGTTTCTCAAATATGGAAAATCCACCGGAGGCCTTGAAGAATATGTTGCAAAAGACAAAAGAGGGTCAAGACATATGGGCCGGTTTGGAACATAGCGAAATTGGACCGTATATACAAAGTATATTGTTAGCGTCGCAAAATTTATTAGCCAATCAAAAATTGAATACGGATGGTAGTAGTACGactgtattaaataatatggtaCCGGAAATAATGAAACGTATGATGGTTGAAgaacaattattgaaaatgcaACATCAGAATAATGGCGATAGTAATAATGAGACGAAAATGATGCGACCATCGCCATCAAATTCAGTTGTATCGAAAACGGACAAAGACAAAAGTCGATCAGAATCGGATATGGAAACTGAAGAGTCCTCATCGAATGTGATACTCAAAATTCCGTCCTTCAAGCCAACGTCTAGTAAAAATGGATGCGATTCATTGTTCAATAGAAATTCGGTAGTAGAAGTTAACAGTATGGTGTCACCAACGGTGTCAGCTAGTGAATCTGGATCACCACCAATTATGCCAAATAAAGGTTTAATTATGAAAGATGTTAAAGATGTAATTGCTCAAAGTATCAGTCAAAAATTCCAACAAACGATGGAGCCACGTAGACCAATTATAGATATGGACTATAAACGATTTACACCGCCTTTAAATAGTGGTATATCAGTTATAAAAAGTCAATCGGAATTAAATAGACAATATCAACCGCAACAACAGAAACCGTCACagagtagtagtagtagtggaggtggtggtggcggcggcggcggcggtaATAGTAGTAATTCATCGGCGACGGGCGGCAAGGGTACGCGTCCAAAACGCGGTAAATATCGTAATTACGATCGTGATAGTTTAGTGGAGGCTGTACGGGCCGTGCAACGCGGTGAAATGTCCGTACATAGGGCGGGCAGTTATTACGGTGTACCTCATTCGACGCTCGAGTACAAAGTGAAAGAAAGACATTTGATGAGACCGCGTAAACGGGACCCAAAACCGAATCCAGTCGATGAAAAAATTGCTAGtctcaaacaaaatgatttacgAAATTCGCAAGAGAAACTAAAAGTGGCGCCAACTGTTATGAAACCACCACAGAAATTCTCACCAACATCTCCAAATGGTATTAAATTGCCGTTGTTCGATTCGTCTGGTATGCCACCGTTGTCCGGTTATAATCATCCACCGTTTCCATTTTGGGCACATCCCAGTTTTCCCGCCATACCATTAGATTATGGCCGTACGCCGACGTCAAGCTTTCCACCACCGAATCCCGAATTTTTTGCATCACAAATGATGCAAAAACTCCAAGAAGAATCCACACGCACCCAgcataataatacaaatacaacaaatacacCTAGTACTACGCCAACATTAGCGAAAAGTGCTCGACAAATGGCCGAATCGTTGTTAGATGGTACCGGTTCGAATGGTTCATTTCTAGATGGTATTATACGGTCTAGTCTAGAATCTGGTGTGCCGACAAGTGAGGAGAAATCGTTGaaggaagaaaaaaatttagcaCCGGAGAATATGTCAAATAAAGCACTTTTAGAGCAATTATGTCGAAATAGTCGATTAACGCCACTATCTAAACCAAATACCATGACATCAGATGCAAACAGTTCTGGGGATGAATCGTATAGAAAAGGTCCTAGTCCCATAAACTTCAGTACCGGGGCAAGTTCCCATGATGATAATATGGATAGTACATCATCGCCTAGACAAGATAAGGAAAACTCGGATTTACACACCATCGAACTCTCGAACGATTCAAATGATTCGAACGAGAGGAAAATCTTAAACGACCACCAACAGGACGAACAAAAaccaccaacaacaacacaacagCAACAACCGCCTGCACGAATCTATCTGAAACAGGATCTTGTGAAGCCGGAAAATCTGAAACCGGAAATGTTGGTGCGTTTTAGGGACGTCCTACCAACCACGGACATAGAAAGGAATGGCATTAGCGAAAGTGTAACAGAAAGTGCCTCTGATAATGACACAATGTCACAAGACTGA
- Protein Sequence
- SPRHSDSESSESPSDSEAPPSLTPSSSLNNNIINSNNNNHHHHPHHRAGSAGVQHPVTPANMTTIESVTSMAALAAVAALTGGNSPVTPAPHLPFYAPNIHNWYLANMARTFHTQQQQQQQQDVGGVDKVSGGGGGEQPLDLSKGGGSGGNNATNIGNIHFPTSGTNMATITGTEQKIGNNVNARLPTLDTKHIYNSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLVSNTPLKLDEEEVMDDEKELSGAEEEKEVEKALQGPLVTMADIMRFSNMENPPEALKNMLQKTKEGQDIWAGLEHSEIGPYIQSILLASQNLLANQKLNTDGSSTTVLNNMVPEIMKRMMVEEQLLKMQHQNNGDSNNETKMMRPSPSNSVVSKTDKDKSRSESDMETEESSSNVILKIPSFKPTSSKNGCDSLFNRNSVVEVNSMVSPTVSASESGSPPIMPNKGLIMKDVKDVIAQSISQKFQQTMEPRRPIIDMDYKRFTPPLNSGISVIKSQSELNRQYQPQQQKPSQSSSSSGGGGGGGGGGNSSNSSATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRNSQEKLKVAPTVMKPPQKFSPTSPNGIKLPLFDSSGMPPLSGYNHPPFPFWAHPSFPAIPLDYGRTPTSSFPPPNPEFFASQMMQKLQEESTRTQHNNTNTTNTPSTTPTLAKSARQMAESLLDGTGSNGSFLDGIIRSSLESGVPTSEEKSLKEEKNLAPENMSNKALLEQLCRNSRLTPLSKPNTMTSDANSSGDESYRKGPSPINFSTGASSHDDNMDSTSSPRQDKENSDLHTIELSNDSNDSNERKILNDHQQDEQKPPTTTQQQQPPARIYLKQDLVKPENLKPEMLVRFRDVLPTTDIERNGISESVTESASDNDTMSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01344834;
- 90% Identity
- iTF_01121509;
- 80% Identity
- -