Basic Information

Gene Symbol
osa_1
Assembly
GCA_004796505.1
Location
SSSI01009930.1:29848-45803[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-26 7.3e-23 80.8 0.0 3 89 920 1003 918 1003 0.94

Sequence Information

Coding Sequence
ATGGCTGCAACGCAGGCCGAAAAGCAACAAAATGACGTGAATAGTAGTGAAAAAGTGCAGCCAAATGAGCAACATCTGAATGTGCGGAATACGTTGTTGCAAAATGGGACCGATAAGAGTGGTGTTGTTCGCAGTGGTGGCAGTGTAGTGCATAATACAAAAGGAAAAAACACCGGCGGCAAAAACGCCATAGAAATGAGTCAATATCGGCAGGATGCcagtggcggtggtggtggtgttggaGGAGGCGGTGGTGGTGTGGTTGTTGGTCCAACAACAAATCCACAAATTAATACAGGATTACCTGGGGGTGCCGCTGCTACCGCCGCCGCCATCACTACAGACCTGGCTCTTAGCAGTAATAGTAGTAGTAGTGAAACTGATACGTCCGTTGCCGCCGCCGTTGCCGCCACGGTTGCTGCAACAGCCACCAGTAGTAGTATAACACAAGACAACTCGAATATGTATCATCATCCACATCATCCACCACCACAACCACCACCATCTGATGGTCCATTACCATCTGTTTCATCAGTACAAGTTGTACCGTCACCGGCACAAGAcggacaacaacaacaacaacaacaacaacaacaacaacaacaacatcatgCTGTATCTTCGTACGGTTCGTCATACACAAATATTAGAGATGTACATAATAGTACCAATGTGGAAGGTGGGGTCCATGCGTTCGGTCCACGTCAACCCTTTGGCGGTGGCGGTGGACCAAAACAAATCCattcacaacaacaacaacaacaacaacaaataccGACACGTTATGTGCCAGGATCACAACCTACTGGTCCTACACCTACGCTCAATCAGCTATTATCAAGCAGTAATACATTACATCAACgttattcaaataattatgGACATCCAtcagaacaacaacaacaacaacaacaacattataATCAAACATGGTCACCACAGAAACCATTAACTCCACAAGGATATGTACCTGGTGGTCCTGGACCAGCTCCAAGCAATCAACAGCCACCTCCAGTGGCTCCATATAGGACTCAACCATCGTTATCACCAGCTTATGGTGGTGGTTCAGCACCAAGTCCTGGTTATGGTGAAAGACTAAGTTGGCCCGGTGGCCCATCAGGACCTGGCCATGGACAACATGGTCCTGGCAGTCCTGGACCACCTAATCAAGCAGCTCCAGTTAGTCAACCATCACCACAACCATCTCAACCACCAAGTCATTCACCAGGTCCTGGACCTGGTTTACCACCAAGTCCACAACATCAGCCACAtcaaagttttcaaaatagaCCACCACCTCCTACTACGCCAAATGCACATGCCCCAGATGCAgctgaTTTAAGTGGTGGTAATAGTAATGATAGTTCTGGTGGTCCAGCACCTGGTACACCAAATTCCCAGGGTATGAGACCCACACCATCTCCAACAGGATCTACTGGTTCAAGGTCAATGTCACCAGCAGTAGGACAAAACATTCCCATGCCTCCGAGGCCATCGAGCGGTCAATCTGATGGTAGTGGACCACCACGAATGAGTCATTCCCCAATGGTAACACAGGGTGGCAATTATTCGACGCCACATTCACAGCCCCATCCTACCCATCCACATGGTTACAAACCACATCCAAGTATGGTGCAATCTGGTCCCGGTGGTGGACAACAAATGACCCTTTATCAACCAAATCAATATACACAAACTGGTTATCCGCCACGACCTCCATCTAACTTACAATATCCGGTGCCAGGCCAAGGATATGGACCACCTAcgggtggtggtggtggtggtgttgttGGTGGTCAACCGCCACCATCGAATAATATGCctcaacaattttcaaatcgCCAACCAACAAATCATATGCAAAGTACACAATTTCCCCAATACCAACCACAGTGGCCTACGAATGTATCATCGGCGGCAGCTGCGGCGGCGGCGGCCGctgcagcagcagcagcagcagcttCAAATAAAGGTAATGGACCAAATccaccgccgccaccaccacaGGTGACCGGTTCGTCGTCGCCTGGTCCAACACCAAGGCCGCCACACTACCTCAAACATCATTTGCAACATAAAATGGGTTTTACTAGTGGCGTACCACCACCAACTGGTTCGATACCGCCTAGTCCAAGTCCACCACAAAATTATCATATGGGTCCACCGCCAGTCGGCCACCATATGGGACCACCATTGTCGATGGGCCCACCAAATATACCGCCTGCAAATAGTCCATTATTACCAAACAGTCATCCGCATGATACTGGCccaggtggtggtggtggtggtagtGGTCCAATGCCGCCGCCAAGTTCGACACCAAATTCACATACGCAATTATTACCTTCTGATGTGATGGATAATGGTATTACGACAACGGCACAAGGTAATTTAAATACGCATGTTACGTCATCGGCGGCTGGTGGATCTGTTACGTCTGTTGTTACAACTGGACCAGATGGTACACCAATTGATGAAGGATCACAACAATCGACATTGTCTAATGCCTCAGCTGCGTCAGGTGAGGATCCACAATGTACCACTCCAAAAAGTGGCCGTAAAAATGACATGGGTGGTCACTATAGTCACCCAACAACACCACAAAGTACAGTACCATCTCCAGGAGCTGCAAGTTTATCATCAGTTCATGATGAATATGGTGAAATAAGTAGTCCAAGTTGGACATCACGGACACCAGCAAGCCCGAAAACTGACAGCCTTAGTAAGTTGTATGAAATGGACGAAAGCCCAGACCGGAGAGTTTGGTTAGACAAGTTATTAGCTTTTATGGATGATAGGAGGACCCCTATAACAACGTGTCCCACTATATCCAAGAATCCCCTTGATTTGTTTcgtttgtatatgtatgttaaagAACGAGGTGGCTTCATGGAGgtaACAAAAAATAAGACATGGAAAGACATTGCTGGTATGTTAGGCATTGGTGCATCTTCGAGTGCTGCTTATACATTAAGAAAACATtatactaaaaatttattggcTTATGAATGCCAATTCGATAGAGGTGGAATTGATCCACAACCAATTATAAATCAAGTTGAAGCTAGTTCGAAAAAGAAAGGTGCTAAATCAACGTCTGTACCATCTCCTGGATCATCAAATTCACAAGATTCATTTCCTGCACCTGGCTCAGGTGGTGGTTCAATGGATGGTTATGGTGGTTATGGTGGTTATCCGCCAACAAGTGGTAATCCTGATTATCCACCATCGCAACGACCTTCTTCACAATCAGCCCCGTCCCCGCACGGTGGTTCGGGTGGTTCAAATCATTTGAATAATACAGCTCCTGGTGGTCCGAGCCCTGCGGGCGGGGCTGCTGATAATGTGAGCGTGTCTAATCCATTTGATGATGTATCAACAAATCCACAGCCACGAAGTGGTCCATTTCCAGGTGGTGCACATCCACCATATCCAACTGGTAATAATACACCGCCGCGGCCACCACCTGGACAAAATTATTCAGGACAACCTGGTGGCGGTTATCAGCAGTATCCACCTGGTCCACAACCCGGTCCAACTGCACCACCAGATCAATATTCGCCGTACTCAACGAATTCCGCATATCCGGGTGTTCGACCGGTTTATCCTCCATATTCGGGTGATTCCGGTGGCGGAAGCCAGGGTAATACTGGCGGGGCAGGTGGTGCCAGTGGTGCACCACCACCTCAAAGTCCTAGTAATACACAAGGCGGGCCACCGTCGACGGCTCCACAAGATCCATATAATCGTTATACAGCAGCACCACCGCCTGGTGCCAATTATACACCAAGACCTACTTATGGTACAACACCAACAAATGCTGGTGGACCATCAACTTCACAACCGCCTGCGGGACCGGCTGGTCCATATGCACATCAAGATTATGTCTATCGACCAGATCAAcAACAACCAACTGCAGCTGGGGGTGGTGTTTATCCTGGTGGACCTGGACCGAATAAAACAATGCCACCACCAGGTCCACAACCACCAAGACGACATCCAGATTTTACCAAAGATCAACAATATGGACCTTATGGACAGCCACGCACACCTATGTAcacTGGCTGGAACAACAATAATCAGTATAATCGGCCACCACAATATGGCGGAGGTCCATCTGGCCCCCAAGTTCCACAACAATGGAATCCAGGCAACAGATCAGCAGGTCCGTGGAGTGGTAATCAAGGATATCAGTCACCACAGCCAGGTCAGTGGCCAGCAATGGCAAATCCTCCACAAAATCCTACAATGCGACCAGTTCATCGTCCTGGAAAACCATTTCCGCCTATAATGCCACCGGGTAGTGCAGGTGGTGTTGGTGTTGTTAAAAATCCACCACAACAAAGTGTCAGCAATTCGTACAGTCACAATCAATTGCCTAAACGTGAAATAACATTTCCACCAGATAGTGTTGAAGCAACAATGCCAGTTTTATATCGTAGAAAACGTATATGTAGATCAGATCTTGGACCAGTCGATGCATGGCGTATAATTATGTGCTTAAGATCGGGTTTATTATCAGAAACAACATACGCATTAGATATGttgaatgtattattattcgaTGACACATCAGTTAGTTATTTTGGTTTGAATCAGTGGCCTGGTTTGTTAGAATTATTAATGGAACATTTTCGTAAATGTTTAGCGGATatgtttgataataataatgatgacgataaaatgaaaacagcATCATCTTCATCAGCATCAACATCGTCAGATTTCATTGATTTAGGTGGTATTGTACAACCAATTGATCCAAATTTAAAGAATGttatattaacaaatacaaataattatacattgaTGTCACGTAAAGGCAATCCAGTTAAATTGATTGACAAAAATGATGATATATTTGTTCAAGATAATTTAAAAGATTGGGATTATAAAGGCGATGTTAATCGTAAAAATACGTTAGCCACAATACCCACAGATCCATGGTATACAACAGCTGAACATATTTTGCCAACATTTCAAGCTGAATTTGGTAACATTCCATTCCATATGCGTTTGGATGACGatttgaattataataaaaataataagaatttattaaatatgaaacgaagaaaaattgaattggaTGATCGACGAACAACAACATCACtaccaccaccgccgccaGATGAGACACCGCCCCCTATTAAACCTTCGACTAGTAGTGACAAAAAACGTAGAACATTAAGTGATGTGATATCTCGAATTAAAAAAgattcatcatcatcatcaacatcgTCTTCGTCGTCAGATGGTAATGAAataacaacagcaacaacaacaacaacaacaacaaatgtgCTCACAGACAAAATAAAGACTGAACTAGTTGTAGTGAGTGAGAATGCGAACTGCAGTGAAAACAATACAGACATTGAACATGAACAACAACAGCAGTCAAATATTATAGATCTGAACAATATTAGTAATACTAATAATAGTAGTGTAAAAGTAATCAAGTGCGGTCATATAATAGAACAACAAAAAGAACAAAGTGCTGTGCGTGATCCGGCTGGTACATTAAAACGTCGACGTATATCAGATTATGAAGATGAATCGTATACAAGAGACGAAGCTAGTTTAGTACTATTAACAGAAAGCCAAGATAATATTGGCAAAAGATGCGTTTGTTTGTCCAATATACTTAGAAGCCTTACTTTTGTTCCTGgcaatgaaattgaatttgctAGAAGTCAAACATTTTTAGCATTAGTcggtaaattattattattacatcatGAACATCCACCTCGGACACAGAAGACTCGAAATTACGATAGAGAggaGGATGCCGACTTCGCAGATTCATGTAGTAGCCTTCAAGGTGAAGGTGAATGGTGGTGGGATTTTCTTGTGCAAATcagagaaaatattttagtatcAATAGCAAACATTTCCGGACAAATAGATGTATCAATATATCCTGAAGAAGTAGCTAGACCATTATTGGATGGTTTATTACATTGGGCAATATGTCCATCAGCAACTGGCCAAGACCCATTCGCTTCTGTAGGTCCATCTTCGGTGTTGTCACCTCAACGTTTAGCATTGGAAgcattatgtaaattatgtgTTACTAATAGTAATGTTGATTTAGTGATTGCTACACCACCATTTTCAAGACTAGAAAGATTATGTGCTGTTTTAACAAAGCATTTGTGCCGTTCTGAAGATCAAGTATTACgtgaattttcaataaatttattacattatttagcAGCGGCAGATAGTAGTATGGCACGTGTTGTTGCTTCACAAACACCGTGCGTTTCATTATTGGTTGCCTTTATTGAACAAGCCGAACAAAGTGCACTGGGAGTAGCAAATCAACATGGTATTAGTGCACTTAGAGACAATCCAGACTCAATGGGTACCAGTTTGGATATGTTAAGAAGGGCAGCAGCGACATTAGTGTTTCTAGCTAGACATCCAGAAAATAAACCATTGTTAGTGCAACAAGAATCACGTTTACTTGCATTGGTGATGAGCCAGATATTAGATCAACAAGTTGCGCTATTATTATCCAAAGTGCTATTTCAAATATCACGCAGCTAA
Protein Sequence
MAATQAEKQQNDVNSSEKVQPNEQHLNVRNTLLQNGTDKSGVVRSGGSVVHNTKGKNTGGKNAIEMSQYRQDASGGGGGVGGGGGGVVVGPTTNPQINTGLPGGAAATAAAITTDLALSSNSSSSETDTSVAAAVAATVAATATSSSITQDNSNMYHHPHHPPPQPPPSDGPLPSVSSVQVVPSPAQDGQQQQQQQQQQQQQHHAVSSYGSSYTNIRDVHNSTNVEGGVHAFGPRQPFGGGGGPKQIHSQQQQQQQQIPTRYVPGSQPTGPTPTLNQLLSSSNTLHQRYSNNYGHPSEQQQQQQQHYNQTWSPQKPLTPQGYVPGGPGPAPSNQQPPPVAPYRTQPSLSPAYGGGSAPSPGYGERLSWPGGPSGPGHGQHGPGSPGPPNQAAPVSQPSPQPSQPPSHSPGPGPGLPPSPQHQPHQSFQNRPPPPTTPNAHAPDAADLSGGNSNDSSGGPAPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQNIPMPPRPSSGQSDGSGPPRMSHSPMVTQGGNYSTPHSQPHPTHPHGYKPHPSMVQSGPGGGQQMTLYQPNQYTQTGYPPRPPSNLQYPVPGQGYGPPTGGGGGGVVGGQPPPSNNMPQQFSNRQPTNHMQSTQFPQYQPQWPTNVSSAAAAAAAAAAAAAAAASNKGNGPNPPPPPPQVTGSSSPGPTPRPPHYLKHHLQHKMGFTSGVPPPTGSIPPSPSPPQNYHMGPPPVGHHMGPPLSMGPPNIPPANSPLLPNSHPHDTGPGGGGGGSGPMPPPSSTPNSHTQLLPSDVMDNGITTTAQGNLNTHVTSSAAGGSVTSVVTTGPDGTPIDEGSQQSTLSNASAASGEDPQCTTPKSGRKNDMGGHYSHPTTPQSTVPSPGAASLSSVHDEYGEISSPSWTSRTPASPKTDSLSKLYEMDESPDRRVWLDKLLAFMDDRRTPITTCPTISKNPLDLFRLYMYVKERGGFMEVTKNKTWKDIAGMLGIGASSSAAYTLRKHYTKNLLAYECQFDRGGIDPQPIINQVEASSKKKGAKSTSVPSPGSSNSQDSFPAPGSGGGSMDGYGGYGGYPPTSGNPDYPPSQRPSSQSAPSPHGGSGGSNHLNNTAPGGPSPAGGAADNVSVSNPFDDVSTNPQPRSGPFPGGAHPPYPTGNNTPPRPPPGQNYSGQPGGGYQQYPPGPQPGPTAPPDQYSPYSTNSAYPGVRPVYPPYSGDSGGGSQGNTGGAGGASGAPPPQSPSNTQGGPPSTAPQDPYNRYTAAPPPGANYTPRPTYGTTPTNAGGPSTSQPPAGPAGPYAHQDYVYRPDQQQPTAAGGGVYPGGPGPNKTMPPPGPQPPRRHPDFTKDQQYGPYGQPRTPMYTGWNNNNQYNRPPQYGGGPSGPQVPQQWNPGNRSAGPWSGNQGYQSPQPGQWPAMANPPQNPTMRPVHRPGKPFPPIMPPGSAGGVGVVKNPPQQSVSNSYSHNQLPKREITFPPDSVEATMPVLYRRKRICRSDLGPVDAWRIIMCLRSGLLSETTYALDMLNVLLFDDTSVSYFGLNQWPGLLELLMEHFRKCLADMFDNNNDDDKMKTASSSSASTSSDFIDLGGIVQPIDPNLKNVILTNTNNYTLMSRKGNPVKLIDKNDDIFVQDNLKDWDYKGDVNRKNTLATIPTDPWYTTAEHILPTFQAEFGNIPFHMRLDDDLNYNKNNKNLLNMKRRKIELDDRRTTTSLPPPPPDETPPPIKPSTSSDKKRRTLSDVISRIKKDSSSSSTSSSSSDGNEITTATTTTTTTNVLTDKIKTELVVVSENANCSENNTDIEHEQQQQSNIIDLNNISNTNNSSVKVIKCGHIIEQQKEQSAVRDPAGTLKRRRISDYEDESYTRDEASLVLLTESQDNIGKRCVCLSNILRSLTFVPGNEIEFARSQTFLALVGKLLLLHHEHPPRTQKTRNYDREEDADFADSCSSLQGEGEWWWDFLVQIRENILVSIANISGQIDVSIYPEEVARPLLDGLLHWAICPSATGQDPFASVGPSSVLSPQRLALEALCKLCVTNSNVDLVIATPPFSRLERLCAVLTKHLCRSEDQVLREFSINLLHYLAAADSSMARVVASQTPCVSLLVAFIEQAEQSALGVANQHGISALRDNPDSMGTSLDMLRRAAATLVFLARHPENKPLLVQQESRLLALVMSQILDQQVALLLSKVLFQISRS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-