Obor007792.1
Basic Information
- Insect
- Oryctes borbonicus
- Gene Symbol
- pnr
- Assembly
- GCA_902654985.1
- Location
- LR736871.1:4595996-4598722[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.16 4.9e+02 0.5 0.4 3 14 33 44 32 50 0.83 2 2 3.1e-17 9.2e-14 50.8 3.2 1 35 390 423 390 424 0.98
Sequence Information
- Coding Sequence
- ATGGAAAAACTCGACAAATCGTCCGCAATGCTAGACTCAATGCTGAACTCCAGAAAAGAGCACCACGTGATCGTTTCTTCCAACAATCCTCCACGACAATGTCCGACGACCGCCACTACGCAGACCCGGCATTTTTCCGACAAGGAAGTAGCTAAAACACCTTCCGACACGCCGCCTCCTCAACTCCTAACGGAAACTCAGATCAAGATCGAACCGGATGTTACCATCGAGCCAGTTCCCTTATCGCCGCATCTGGAACAATCGGTTATCAAATTAGAAGGCCGTATCCAGCCCGCGGGCCGTCAAACCCCCGATATAAGGCCTCAGATCGTCTTCATGGACGATCCGCAGCGTTCCAGTTCACCGCGATCGCCGCAACCTTGCGACCAGCAGATGGCGCACGCGCAAAGGTTGACGGAAGTGTATTCCCCGAATGGGcgacaaattcaaatatcttcCGAGCCGACCAGTATTCTAGACGATGAAGTATACTCGTTGGATTTGAGTCTGTCTCAAAGTAAAGACGTGGAAATGGAACCTGCCGATTTATCGAACAAGAAACCGGAGAAGGTGACTTGTGTACCGGAAATTGAGTTTATTAAGGAGGAGATAAATGACGCTGCTTCCGATTATAGCAATAGCTCGGACCCTGAACGGCTAGAAGTTGATATGTCGCAGgGTGCCGAAGATCATTCGAATTCAACTACAGAAAGTGCCCCCTCACCTACGCCAATGACACCCGGCGATGACGACAGAGCTCTCTGGCGGGCCCTGACGCACAACGGTCATTCCCCTTCCACTCCGCTTTCCGGCGAGGCGAGTCAACTCCTGCGGAAATTAATAACCTGCAAGAAGCTAGGTATGAGCATAACTCCTGCACCGGCTAGCCATCCCATTGGTCGAGCCGGTGATCAAGCGATGGCTTTAACTGACGTCAGTCGAAGCGGCATGGATGCCAACTTAATGAAAAGTTCCTGTAGACGAAAACAAAGCTTCCCGACCAAGGCAGCCAAAGAGGAGCCTGTAGATCGGAGCGATAGTCCTTGTCAAGATGTCGAGGGGGAAGATTATTTGCCGGATTTCACAGGGAATAGTCCGTGGTGTAATATACAGATGTGTAAGAACAGTAAGACCAATCCGGGTATCGCACGGAGGATGAACCTCTCATGCACAAACTGCGGCACCAGAACAACGACAATATGGCGGCGAAACGTTAAGGGAGAGATGGTCTGTAATGCCTGCGGTCTGTACTTCAAACTCCATGGTGTTGATCGACCTCACACGATGAGGAGAGACACCATCCACACCAGACGCAGAAGGCCGAAAGTAGATCGGAGAACGGAGGTTGAACGACAAAGAAGAGTTATAGCGCCTAAAAAGGATAGTACCCCTTCCGAGCAGGATAGTGAAGACCTACTAAGTGCTTTACGCAGGCAACTACAACCCCATCTAGTGATGGCATTGCAAGGACACAAGAATCTTAATTACCCCAACGTTCAGGCTGTTAACTACAATCCAATCATTACGACAGGGTCGCCAGCTGGTTCCGCAGCCGAAGCTGAGTCCGAAGAAGAAAACTATAACGATCTGCCTCTGAATCTCGTCGCCACGCAGATGGCTGAAACCGAAACCCATTGA
- Protein Sequence
- MEKLDKSSAMLDSMLNSRKEHHVIVSSNNPPRQCPTTATTQTRHFSDKEVAKTPSDTPPPQLLTETQIKIEPDVTIEPVPLSPHLEQSVIKLEGRIQPAGRQTPDIRPQIVFMDDPQRSSSPRSPQPCDQQMAHAQRLTEVYSPNGRQIQISSEPTSILDDEVYSLDLSLSQSKDVEMEPADLSNKKPEKVTCVPEIEFIKEEINDAASDYSNSSDPERLEVDMSQGAEDHSNSTTESAPSPTPMTPGDDDRALWRALTHNGHSPSTPLSGEASQLLRKLITCKKLGMSITPAPASHPIGRAGDQAMALTDVSRSGMDANLMKSSCRRKQSFPTKAAKEEPVDRSDSPCQDVEGEDYLPDFTGNSPWCNIQMCKNSKTNPGIARRMNLSCTNCGTRTTTIWRRNVKGEMVCNACGLYFKLHGVDRPHTMRRDTIHTRRRRPKVDRRTEVERQRRVIAPKKDSTPSEQDSEDLLSALRRQLQPHLVMALQGHKNLNYPNVQAVNYNPIITTGSPAGSAAEAESEEENYNDLPLNLVATQMAETETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253216;
- 90% Identity
- iTF_00627896;
- 80% Identity
- -