Basic Information

Insect: Oryctes borbonicus
Gene Symbol: zld
Assembly: GCA_902654985.1
Location: LR736864.1:6654997-6657834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0029 0.25 11.9 1.7 1 23 38 60 38 60 0.97

2 7 0.0026 0.22 12.1 0.8 2 23 258 280 257 280 0.96

3 7 0.0019 0.16 12.5 2.9 1 23 476 500 476 500 0.92

4 7 0.0028 0.24 12.0 8.0 1 23 826 849 826 849 0.97

5 7 0.28 23 5.7 7.9 1 23 855 877 855 877 0.97

6 7 0.0001 0.0084 16.5 8.0 1 23 883 905 883 905 0.97

7 7 0.001 0.087 13.3 3.4 1 23 911 933 911 933 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0029	0.25	11.9	1.7	1	23	38	60	38	60	0.97
2	7	0.0026	0.22	12.1	0.8	2	23	258	280	257	280	0.96
3	7	0.0019	0.16	12.5	2.9	1	23	476	500	476	500	0.92
4	7	0.0028	0.24	12.0	8.0	1	23	826	849	826	849	0.97
5	7	0.28	23	5.7	7.9	1	23	855	877	855	877	0.97
6	7	0.0001	0.0084	16.5	8.0	1	23	883	905	883	905	0.97
7	7	0.001	0.087	13.3	3.4	1	23	911	933	911	933	0.91

Sequence Information

Coding Sequence: ATGGCAAGTAATAACGTTCAACAGCAACAAGCACAACAGCAGCATTATCAGACGGTACAACAAGGCGGACAACTTCatcaacaacaacagcaacaaggTAACTCCTCGGCGCATCATTGCAAAGAATGCGGATTGTATTTGAATTCGGCCGAATCGTTAGAGGTCCATTTGCGCTATCACAAAGAGAATCTTCTGAACAAATGGGCGACGCAAGCGGCCACCTCCGCACCGCACGCCGCCGAAGAGACGAACAATAACACCAAGCCGCAGCATCAGATCAAACGTGAGTTTATTCCAAATACTATTTCCGCGGCGGCGGACAGCTCAGATTCGAATAATATGAAAAAGAGTCCCGAATATGCGAATCGGTCTACTCCCGAGACCAATAGCGcgaataacaacaataacgCGGGATTCGGCCATCCTCCGACACCGCAAAGTTACCATAGCGCATCGTCACCCTATCAGAATCCAGAAAATTCATCTTTCTCGCCCGGCttccaaaatttccaaatcAAGCAAGAGCGGTCTTCGCCAACACAACATTTCCAACAGAATTTCTATTCGGAAAGTTTCTTTAACATGGATAATTCGCAAAATTCCAATATGGGATACAATCAGGAGTATGCTGTTCATAAAATGGGTTCGCAAAATTCCGCTTTTCGCTACCACCCTTATCAGCAACAACATTATGATCGCAGTGCTCAAGCACAGGTCACTTCTTCGAGTCCGGCGTATCCTCCACAACCGACGCCCTCACCAAGTCCGAAGCAATGCGATAAATGCGGTTGCGTTTGCGAATCCGCAGCTCAATTAATCGAACACCTCAGCGTGGCGCATCCCCCAACTCCGGCTCCACACGCCATGGGCGcatatcaaaattttatgttcGGAAATACGGAGATCAAAGTGGAAGACGATGCGCAAAGCGAGATCTTAGACTTGGATTCGCATAAGGTGCATCAGGTTTATTCGGAGGAGGAGAAACGTCAACAACAAAACGGCGAACTCACCCACAATCCGCATTCGGTATCAGCGATGCTAAATCAATGGCCGCATCCGTCGCAACAACACAGCCAACAAAATTCACCGCAGCAAAAGATGTACCTCCAAGATCAAAGGATGTACAACATGCCCGAGCAGAAAATGTACCCGAACGGGATGCAGgagaaaatgttccaggatAAGCTATTTTCCCCGCATCCTGTACCAAGTGATTTTATGCAGAATGGTGTGACGACCACCTCACAAGAAAATGCCATGAATCAAGCAGGTCAAACCTATAGACCATTCGAGATGGCACCGCAAGCTACGCCGCCGGTAATTTCAAGTACGCAAGTACCTGTAGGACCACCGCAGACCGCACCACCCCCGTCAACGAAAAGTGCGAATTGGAAGTCGAACGAAGCGAGAAGACCGAAAACCTACAATTGCACGGCTTGTAATAAATGGTTTACAAGTTCGGGCCACTTGAAGAGGCATTACAATACGACCTTGCACAAAAACGCGGTCAAATCAAGCGGACAACCAGACCCGGCGTCGTTACCCATTAGCGCACACCATCATCCAGCTAGAGACCAAAATAATCGCGATGATCAATCCTCGAATAGTCCGAATGATGATCCGAAGGAGGATCCCTTAGCGCTGAGTTTCGAACGTCCACCTTCAATACCAGGACTGCTTCAACAACCACCTAACGGTCCGTACGATCGGCAGCCAGCGCCGAACATCCATCATCCGTCAATGGGACACGCTGGACTTACAAACATGCCAGGGAGTCCCCCAAACGGGGAGGCAGGCCCCTCAGCTACCGCCAACATGGATTCGAGGGGCCTGCTAGCGCTCAACACTACCCATCACCACACCAACAGCAACAGTCCGCATGGTTTTATCCCGCCGCCCATGATGCCAATGGAGAACAATCAATTTCAGATGTACCCAAACGGGGCTGCCCCCCACGTTACGCAGGTTATTACCAACAACCTCAGTACTACTGGTGAGGAGTTGATCCAACAGCAGCAACACCAGTACGGCACCGCGACGAATCGAATGGTCACGATGAGCGAAGCTCAACCGTTACCTAGTTTCGCACAGTTCCAGGCGCACAGGTACGGTCTCGTCTTGAGCTATAACGGTGCTAACGTTAACGTGGGGGGCGCGGGGCCGGTGACGGCCCCATACTCCTATTACAGTGACCCGTACGACACGCCAGAATCTAGAGCGTTGATATTCCGGCAAGAAGACGACTATAAGCTAACGGTGCTGACGGTACCAGATCCATCTATGGAAGGTGATCCATATTCGCCGCCGAACAACAATAACCATTTAGATCTCTCCGCGACGGATGGGGAACTGAAGATGGAACTCAAGTACGAAACGCCCGCATCTCCCGAGAAAGCTCACATCAAACGCGATTACGAAGAGAATAGCAGTCCTCAAATCTCATCTACGGTCAACGTGAAACAGACCAGTCTACACAAATGCTTCGATTGCGACAAGGTCTTCAACAAATCCTGCTATCTAACTCAGCACAACAAGACCTTCCATAGTGGCGATAAACCTTTCAAATGCTCGAGATGTGGCAAACGTTTCTCATGCGAAAACCAATACCAGGAGCACCACAGTAAGCACGCCGGGGAAAAGCCACACAAATGCGACCTGTGCCCGAAACAATTCAACCACAAGACGGATCTGAGAAGGCACATGTGCTTGCACACCGGTCAAAAACCGTACGCCTGTGATACTTGCGGAAAGGGATTCATCAGGAAGGATCATATGCTGAAGCATTGCGACACCCACATCAGACGACCACATTCCAAACTGTCCAGCGTCCGTTAG
Protein Sequence: MASNNVQQQQAQQQHYQTVQQGGQLHQQQQQQGNSSAHHCKECGLYLNSAESLEVHLRYHKENLLNKWATQAATSAPHAAEETNNNTKPQHQIKREFIPNTISAAADSSDSNNMKKSPEYANRSTPETNSANNNNNAGFGHPPTPQSYHSASSPYQNPENSSFSPGFQNFQIKQERSSPTQHFQQNFYSESFFNMDNSQNSNMGYNQEYAVHKMGSQNSAFRYHPYQQQHYDRSAQAQVTSSSPAYPPQPTPSPSPKQCDKCGCVCESAAQLIEHLSVAHPPTPAPHAMGAYQNFMFGNTEIKVEDDAQSEILDLDSHKVHQVYSEEEKRQQQNGELTHNPHSVSAMLNQWPHPSQQHSQQNSPQQKMYLQDQRMYNMPEQKMYPNGMQEKMFQDKLFSPHPVPSDFMQNGVTTTSQENAMNQAGQTYRPFEMAPQATPPVISSTQVPVGPPQTAPPPSTKSANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKSSGQPDPASLPISAHHHPARDQNNRDDQSSNSPNDDPKEDPLALSFERPPSIPGLLQQPPNGPYDRQPAPNIHHPSMGHAGLTNMPGSPPNGEAGPSATANMDSRGLLALNTTHHHTNSNSPHGFIPPPMMPMENNQFQMYPNGAAPHVTQVITNNLSTTGEELIQQQQHQYGTATNRMVTMSEAQPLPSFAQFQAHRYGLVLSYNGANVNVGGAGPVTAPYSYYSDPYDTPESRALIFRQEDDYKLTVLTVPDPSMEGDPYSPPNNNNHLDLSATDGELKMELKYETPASPEKAHIKRDYEENSSPQISSTVNVKQTSLHKCFDCDKVFNKSCYLTQHNKTFHSGDKPFKCSRCGKRFSCENQYQEHHSKHAGEKPHKCDLCPKQFNHKTDLRRHMCLHTGQKPYACDTCGKGFIRKDHMLKHCDTHIRRPHSKLSSVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00434439;
90% Identity: iTF_01499244;
80% Identity: -