Obor017563.1
Basic Information
- Insect
- Oryctes borbonicus
- Gene Symbol
- dnajc2
- Assembly
- GCA_902654985.1
- Location
- LR736869.1:6105689-6107581[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8 2.1e+03 -1.0 0.0 3 14 353 364 352 368 0.84 2 3 0.0026 3 8.1 0.0 3 31 435 467 434 470 0.85 3 3 3.9e-14 4.4e-11 42.7 0.1 2 44 566 612 565 614 0.91
Sequence Information
- Coding Sequence
- ATGGGAGAAGTTACCCTGTTGGAAAATATATGCAAAACGGTAGCGATTCGTTatagatttgtatttaaaagatatGAATGTGGTACGCGATGCTTAGAATATTTACCTCACGAAGTTATTAAGTACGAAGTCGATACTCCGAATGATGACGAAGAAGATACTAAACAAGAAGAAATCGAGATTGAAGAAGTGGATGTTAAGTTTTTACGAAGTCTAGATCCGAAGGAATGGAAGCGACAGGATCATTACAAGGTTCTAGGACTAACGAAAGCTAGATATAAAGCATCAGACGAACATATAAAAACAGCGTAtagaaaaatggttttaaaacaCCATCCCGATAAAAGAAAAGCACAAGGTGAGGAGATTAGAACAGACGATGATTACTTTACTTGTATTACGATGGCGTATGAAACATTAGGAAATCCAATTAAAAGGAGATCCTACGATTCTGTCGATCctgaatttgataatttgattcCCCATGGAAATGAGTTGAAGCAAGACTTTTTCGATGTATTCccttattattttgatataaattcaCGTTggtctgaaaagaaaaaagttcctAAACTAGGTGATATGAATTCCAGCAGAGAACACGTCGAAAAATTCTATTCTTTCTGGTATGATTTTAAATCGTGGCGGGAGTATTCCTACGAAGACGAGGAGGATAAGGACAAGTGTCAAGATCGCGATGAAAGAAGATACGTTGACAAGATGAATAAAGCTGAACGATTACgtaagaaaaaggaagaaatgtcTAGGATACGACAATTAGTGGATTCATCATACAATGCAGACCCTAGAATAGCCAAATTTAAACAGGAAGACAAGGAGCGTAAACTAGCTATGAAGAAAGCCAAACAAACAGCAGCTCAACAACGGAAAGAGGAGGAGGAGAAGATGTTACGCGAGATACAGATCGCGAAAGAGAAAGCCGAAGCGGAGGAACGTGCTAAAATGGAGGCTAAACGTCAAGAACGCGAAGCACAGAAGAAAGTATTAAAACGAGAACGTAAAGCATTTCGTGATACTTGCAAAGCTAATAATTATTTCACTCAAAACGAAGAGGAATTACTCAAGCATATGCAGGCCATTGAAACCATTTGTGAAACTCTAAGTGcaattgaattagaagaattaaaCAAGAACCTTAAAAACAACGGTAGGCAAGCATTTGTAAAAGCCCTAAGTGAATCCGAATCAAAGATTGAAGAGGAGAAGAAATCCGTGTTAGAGAGCTACACGCAGAAGGTAGCGAACCAATTAGAAGCAAACAATTCAGCTCGAATACCAGAATGGACGAATGACAATCTATATTTACTGATAAAAGCTGTAAATTTGTTCCCAGCCGGTACCAATCAAAGATGGGAAGTCGTGGCGAATTTTATCAACCAACACGGGTCGTTCTCGGATACCTCGAGGAAATTCAACGCGAAAGCCGTCCTGGCCAAAGCAAAAGACCTCCAGAACACAGATTTCTCCAAAAATAACCTCAAGGAAGCCGCGAATAAGCAGGCCTTCGATAATCTCAAGAAGGAGAAGCGTAACGTTGTTTTAACCGATGAAACTGGGATCTCGAAGAAGATCGATGACGAAAAACTATCGAAAACGAAAAAACCTAAGTCCGAAAATCCGGAAATAGTAAACGGATCTCAAAATTTAGCTAACGGCGATGCGAAACCTGAAAAACCATGGACCGCGACCGAACAGCAACTCCTAGAACAAGCATTGAAGACTTATCCTGTAAGTACGCCCGAAAGATGGGAGAGGATAGCCGATTGTGTTCCGGGACGTACTAAAAAAGACTGTATGAAACGTTATAAGGAATTAGTCGAGATTGTTAAGGCGAAAAAAGCTGCACAAATGGCAGCGACGTCTAAATAA
- Protein Sequence
- MGEVTLLENICKTVAIRYRFVFKRYECGTRCLEYLPHEVIKYEVDTPNDDEEDTKQEEIEIEEVDVKFLRSLDPKEWKRQDHYKVLGLTKARYKASDEHIKTAYRKMVLKHHPDKRKAQGEEIRTDDDYFTCITMAYETLGNPIKRRSYDSVDPEFDNLIPHGNELKQDFFDVFPYYFDINSRWSEKKKVPKLGDMNSSREHVEKFYSFWYDFKSWREYSYEDEEDKDKCQDRDERRYVDKMNKAERLRKKKEEMSRIRQLVDSSYNADPRIAKFKQEDKERKLAMKKAKQTAAQQRKEEEEKMLREIQIAKEKAEAEERAKMEAKRQEREAQKKVLKRERKAFRDTCKANNYFTQNEEELLKHMQAIETICETLSAIELEELNKNLKNNGRQAFVKALSESESKIEEEKKSVLESYTQKVANQLEANNSARIPEWTNDNLYLLIKAVNLFPAGTNQRWEVVANFINQHGSFSDTSRKFNAKAVLAKAKDLQNTDFSKNNLKEAANKQAFDNLKKEKRNVVLTDETGISKKIDDEKLSKTKKPKSENPEIVNGSQNLANGDAKPEKPWTATEQQLLEQALKTYPVSTPERWERIADCVPGRTKKDCMKRYKELVEIVKAKKAAQMAATSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00988361;
- 90% Identity
- iTF_01498810;
- 80% Identity
- -