Obor002463.1
Basic Information
- Insect
- Oryctes borbonicus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_902654985.1
- Location
- LR736858.1:10288261-10513790[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-18 1.1e-14 53.9 0.0 1 45 358 403 358 403 0.95 2 2 1.1e-18 1.8e-15 56.3 0.0 1 43 734 777 734 779 0.95
Sequence Information
- Coding Sequence
- ATGGCCGACTGTTCGTATTCCAGATGCATTCAGCAGAAAAGAAACATTAGAAGGGAACTGCAAAGATGGACAAAAAATATGGTGTACATAGTTGGGTTGGAAAGGATAGCTGAAGAGCTGATGGGTCGCAGGAAATGGAAACTATATCAAGAGTCGACGTCGAGAAATTATCTGCAGCCGCTAAACAACAACGTGAAGAAAATAGGGGAGGTGATAGCGAGGGGAGGAGGAGAGTTGACGGACACAAAGAGCGAACCGGACATCGTCCTCAGCAGGTCGACGCCGTCGGTGTCGTCGTTAGACAAGGACGAGCTGACGGCCGGCGAAAATTCGAGGCCGAACTCACGGCGGGAGGAGGAGGCGGAGGGCGTCCAAGCCACCGAAACCGGCATCATCACGACCAACGCCGCAACAACCGTCGTCATCAAACAAGAACAAGAGGCCGAGGACCGACTCAAAGACTGGTCGCCGCAGAGCAAGTGCTATTTTTGTGTCGACGGCAAACTGGATAGTGACCACAACAATCACGGGGTTTTGAGTCCCCGACACACGGATTCGGATTCCAGCGATAGCCCTAGTGACACGGAAGCGCCGCCGACGTTGACGCCGTCGCTACTCAACAACCGTCATCACCATCACCACCATCACCACCACCTCAACCACCATCATCATCGTCATCAGCGGAACCAAAGCGGCAACATGACGACGGTGGAGAATATAGCGGCGATGGCGGCGGCCCTTAATCCCGCGACGTCCGTATCCCATCATATTCCGTTCTATCCACCCGCGGCACTCATCCAGACTCAATGGTTTATTCCGAGCCCGACGCGGAATTTCCACGCGGAACAGCTGACCGCTGACGCCGACAAGATTTCGGTGGGAAACGGCGGTGGTGGCGGCGAGCAACCGCTGGACCTCACGATCAGTTCCAGGTCCGTGAATAGTAATAGCAGCATGGGACCTACGGATGGTAGTAAAGTGCCAGTAAATCTAAGACTGCCGATATTGGATACAAAACACATACTTAGAGCGAAGCCTAGGATGCCAACAGTAGCAGGTAGACGCACGTACACGGAAGACGAGCTTCAAGCCGCCCTCAGGGATATACAGTCGGGCAAACTTGGTACCCGGCGAGCAGCCGTCATCTACGGCATACCCAGATCGACGTTACGCAACAAGGTGTACAAACTAGCGCTGGAAAAGGAAAGAGAGTCGCACCTCAATCCATCGGTGCTCGGTCCTCTCAAGATCGAAGAGGACGAGGCGATGGACGACGACAAAGAGCTGTCCGGCGCCGAGGAGGAGAAGGAGGTCGAAAAGGCGCTCCGGGCGCCCCTGCTTTCCATCGAAGACATCATCCGGTTGTCGAACTTCGAGAATCCGGACGCGCTGAGGACGTTGCTGAAAGGCAAGGAGGAGATGTGGTCGGGAATGGAGCATAGCGCCGTAGGTTCTTACGTACAGAACCTGCTCATGCAGGCTAGTCCGATCTGTCCAAAACCGCCGTTAGAAAACGAAATAACGCCTATCTTAAGAGAAGTTCTGCGAAAAGTGGTAACCGACGAGAAACTTAGAATACATACAAATAACGGTGATAACGAACGGATATTGCGACCAAGCCCGTCGAATTCGGCGACGCTGAAGAGCGAAAAATGCAGATCCGAATCAGATATGGAGACCGAGGAGGCACCATCGAATGTGATACTAAAAATTCCGTCCTACAAGCCGACCGTGAGTAAAAACGGCGACCTACAGTACCGTAGCCCGTCGCTGCTGTTCGAATCGAGCACGAGCAGTCTGGTATCGCCGCCGGTCTCGGCTAGCGAGTCCGGTTCGCCGCCGATCCTACCGTCGCAGCAGCTGCAACAACAACCACCGACGCCGAAGATGACGATGAAGGACGTTAAAGACGTGATCGCCAAAAATATCACGCATAGGATACATCCGAGTTCGGATCCGATGCACGCGGCCGCCGCCCGCCATCCGATCATCGATCTCGATACAAAGCGGTTGGACTTCACGCCGCCACTCTCCGGCGGCATTCCGGTGATAAAGGCGACGCCAGCCGAACTGCCGCGGACGCCGTACTCGCTGCCGCAATCGAAACCCCCGGGCTGCTCGACGAGTAACGCTAGCAGCACCAGCACGTCGACGGGCGGAAAAGGTACCAGGCCGAAACGGGGGAAATACCGGAATTACGATAGGGATAGCCTAGTGGAAGCCGTTCGAGCCGTACAACGAGGCGAAATGTCTGTTCACAGAGCTGGTAGTTACTATGGCGTACCTCATTCTACACTagaatacaaagtaaaAGAACGTCACCTAATGAGACCGCGCAAACGAGATCCGAAGCCGAATCCGGTTGACGAGAAGATCGCATCCCTGAAGCAAAACGACCTGAAGAACGCCGCTGAACGGATGAAGGCGACGATCAAACCACCCGGACAGAAGTTCGCACCCGCGTCCCCAAATGGCATTAAGATGCCGATCTTCGATCCGAACATACCGATGCAATACGCGACACCGTTTCCCTTCTGGCCGCCGAGCTTCTCGCAGTTTCCCATGGAGTACGCGCGATCGACTGCCGCGGCCGCCGCCTTCCCGACGAATCCCGAACAATACTACGCATCGCAGATGATGCAGAAGCTACAGGAGGACTCGCGGACGCACTCCAACCCTACAACGCCGTCGACGACGCCCACCAATACCGCGCCGACGTTACCGAAGAACACGCGGCAAATCGCCGAATCGTTGCTGGATCCCAGCGCGAACAGTTCCTTCTTAGATGGCATCATCAGGTCGAGTCTTGAATCGGGTGTTCCTTCGTCTGAGGAGAAATCGCCTAAAGAAGAAAAGAACGTCGCTCCGGAGAATATGTCGAATAAAGCGCTGTTAGATCAACTCTGCCGAAACAGTCGCCTAACACCCCTAACAAAGATCACCGATCCGAGCTCTAGCGGAGACGAAAGCTACAATCGGAAAGGATCTAGTCCATTAGTTTTCGCGAACAACGCCGCGAGAGACGATCAGGATTGCTCGCCCAAAAGACACGAGAACTCCGAAATGGTCCACACGATAGAATCGTCAAATGATTCCAACGACGCTCCTGACCGTAAACCGAGCATAAAGGCGGAAGAGGAGGCGAAAGTGGCACCACCGACGCAACCACAACCCGGCCGCATATACGTAAAAACCGAGCTGACGAATCCTGAAAATCTCAAGCCAGAAATGTTGGTGAGATTCAGGGACGTGCTGCACGACGTCGACAGGAACGGAATCGGCGGCGAATCGCTAGCGGGAAGTGCTTCGGACACGGACATTTGTCAAGACTGA
- Protein Sequence
- MADCSYSRCIQQKRNIRRELQRWTKNMVYIVGLERIAEELMGRRKWKLYQESTSRNYLQPLNNNVKKIGEVIARGGGELTDTKSEPDIVLSRSTPSVSSLDKDELTAGENSRPNSRREEEAEGVQATETGIITTNAATTVVIKQEQEAEDRLKDWSPQSKCYFCVDGKLDSDHNNHGVLSPRHTDSDSSDSPSDTEAPPTLTPSLLNNRHHHHHHHHHLNHHHHRHQRNQSGNMTTVENIAAMAAALNPATSVSHHIPFYPPAALIQTQWFIPSPTRNFHAEQLTADADKISVGNGGGGGEQPLDLTISSRSVNSNSSMGPTDGSKVPVNLRLPILDTKHILRAKPRMPTVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERESHLNPSVLGPLKIEEDEAMDDDKELSGAEEEKEVEKALRAPLLSIEDIIRLSNFENPDALRTLLKGKEEMWSGMEHSAVGSYVQNLLMQASPICPKPPLENEITPILREVLRKVVTDEKLRIHTNNGDNERILRPSPSNSATLKSEKCRSESDMETEEAPSNVILKIPSYKPTVSKNGDLQYRSPSLLFESSTSSLVSPPVSASESGSPPILPSQQLQQQPPTPKMTMKDVKDVIAKNITHRIHPSSDPMHAAAARHPIIDLDTKRLDFTPPLSGGIPVIKATPAELPRTPYSLPQSKPPGCSTSNASSTSTSTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKNAAERMKATIKPPGQKFAPASPNGIKMPIFDPNIPMQYATPFPFWPPSFSQFPMEYARSTAAAAAFPTNPEQYYASQMMQKLQEDSRTHSNPTTPSTTPTNTAPTLPKNTRQIAESLLDPSANSSFLDGIIRSSLESGVPSSEEKSPKEEKNVAPENMSNKALLDQLCRNSRLTPLTKITDPSSSGDESYNRKGSSPLVFANNAARDDQDCSPKRHENSEMVHTIESSNDSNDAPDRKPSIKAEEEAKVAPPTQPQPGRIYVKTELTNPENLKPEMLVRFRDVLHDVDRNGIGGESLAGSASDTDICQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00956227;
- 90% Identity
- iTF_00956227;
- 80% Identity
- -