Oabi002453.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- nfxl1
- Assembly
- GCA_000612105.2
- Location
- NW:967704-971646[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 5e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.41 1.9e+03 -1.9 0.6 4 10 161 167 161 167 0.93 3 18 7.6e-09 3.6e-05 22.8 16.0 1 19 175 192 175 192 0.99 4 18 2.1e-06 0.01 15.0 15.6 1 19 228 246 218 246 0.93 5 18 1.1 5e+03 -3.2 1.4 6 10 271 275 271 275 0.94 6 18 1.1e-06 0.005 15.9 11.6 1 19 281 300 281 300 0.98 7 18 0.00076 3.6 6.8 10.4 1 18 336 353 336 354 0.92 8 18 0.03 1.4e+02 1.7 11.4 1 12 388 399 388 401 0.94 9 18 0.46 2.2e+03 -2.1 1.0 6 10 409 413 408 413 0.92 10 18 2.6e-07 0.0012 17.9 14.3 1 18 419 436 419 437 0.93 11 18 0.98 4.6e+03 -3.1 0.6 6 10 466 470 465 470 0.80 12 18 0.00039 1.8 7.7 10.9 10 19 485 494 482 494 0.90 13 18 0.00044 2.1 7.6 4.2 1 11 504 513 504 514 0.95 14 18 0.85 4e+03 -2.9 5.8 14 18 551 555 551 556 0.89 15 18 0.67 3.2e+03 -2.6 0.2 8 11 572 575 571 576 0.81 16 18 0.00014 0.67 9.1 8.2 1 18 592 612 592 616 0.82 17 18 0.00033 1.5 8.0 15.1 3 19 625 641 624 641 0.92 18 18 5.3e-05 0.25 10.5 13.0 1 16 686 700 686 705 0.95
Sequence Information
- Coding Sequence
- ATGAACAAGTTTAAGCGAGTGCAAGCTCAAAATCGAGCGAGCATCGAAAGACACCTTGAAGAACACCCGGTGACAAGCTCGTCCagcgaagacgaagacgaagggACAACCGAACTTTTAGAAAAAGCAGTAGGAAATGTCCTATCTTCGTATCGATTCAAAGGAGGAGATGCAGAGAAGATTCTGTCCTACCTCAGCAATACTTTCCAATCTGGTGGTGCGGTCTGCTTAATATGCATTTCCTCTGTCAAAAAAGTAGAAGCGATATGGAGCTGCATAAGATGTTTCTCCTTCATGCATTTGCCTTGCATTCAACATTGGATACGAGACAGTTTAAACTACAAACGCGAAAGGGAAATAGCTCCAGTATGGGCCTGTCCCAAGTGTCGAGCCGAGTACCGAGACGAGGAGATTCCGAGAGAATACCGATGTTTCTGCGGGAAGACGTCAAACCCGCTTTACCAACCCTGGTTAATTCCCCACTCCTGCGGAGAGGCTTGCGAGAAGCCCTTGGAACCGCGTTGCGGCCATCGATGCATACTTTTGTGCCATCCGGGACCGTGCCCTCCGTGTCCGCAAATGGTCACGTCGTCCTGCTACTGCGGAAAACGGGCAGGGGTGTCGAGACGCTGCAACGCCAGAGAATGGAGCTGCGGAAGCGTCTGCGGGAAGCTCCTCGAGTGCGCGGAGCATCGATGCCGCGACAAGTGCCACCCCGGCGATTGCTCGCCCTGCTCCGAAACGGTGGAAGCACCCTGCCGCTGCGGGGCTGAGGCGGAGGCGCGAAGATGCAGCGAGTCCAAGTGGGTATGCGAGCGGCCCTGCGCGACGCCGCTGTCCTGCGGCGTCCACCGCTGCGAGGGCTTCTGCCACCGGGCCGGGGACTGCGGAAGCTGCCCCCTCGAGGGCAACCGGACGTGCCCGTGCGGCAAGAAGAGGTACGTCGTGTCCTGCAAGGAGGAGGACGTGCCGACGTGCGGGGACACCTGCGGTAAGCGACTCGAGTGTGGTAGGCACTCGTGCAGCATGCGATGCCACTACGACGGCTGCGGCCAGTGCCTGCAGGTCGTCGTCAAGGCCTGTCGCTGCGGAGCCTATAAGAAGGAGGTAGCTTGCGCCAAGGAGTTCCACTGCAACACCAAGTGCACGAGGATGCGCCCGTGCGGCCGACACCCGTGCAACCGGAAGTGCTGCGACTGCCAAGCGAGGGACGCCCCGACCGCCTGCGAAAAGGTCTGCGAGCGGATCCTCGGGTGCAGGAGGCACAAGTGCGCGGCGCCCTGCCATCCCGGGCCGTGCTACCCGTGCGGCAGGACCAACGTCGTCCAGTGCCGATGCGGCGGCAGCCAGCTCGCGGTGCCCTGCGGCACGAGGAAGAGGATCTCGCCCCCGAGTTGCGACCGGCCGTGCGGGCTCGCGTCGGGGTGCCATCACCCGCAGCCGCCCCATCGATGTCACCAGGGCCCCTGTCCGCCGTGCCGCGCGGTCTGCGACCTAGCGCACGCGGCCTGCGGCCACGCGTGCCCCGCTATCTGCCACGCCAGGGTCTGGGTGCGGCCGACGGAGGAGGGCGCGTCGCGGCCCGTCGTCGCGGTCGGCCCCTGGCAGCGCAGGCCGCCCAAGTCCGAGCGACGCGTCCTCCGGGCACTGCCCTGTCCGCCCTGCGAGGTGCCCGTCCCGGTAACCTGCTTCGGCGAACACGAAACGCTACCCCGGCCGTGCCATCTCGCAGTGCCCGACTCCTGCGCCCGGGAGTGCGCCCGGCCGCTGACCTGTGCCAACCACCGCTGTGCGAGGCTCTGCCACCGCCCGGGTGCTCCGGCCTGCGACTCCTGCGAGCGCCCTTGCGAGCTGCCCCGGCCCGAGGGCTGCACCCACGCCTGCGCCAGGCCCTGCCATCCCGCTCCTTGCGAGCCTTGCCAGCGGCTCGTCAAGGTCTCCTGCCACTGCGGCATCAACGCCCTGTATCGGCGCTGCTCCGAGTTGACCCTCGCCTCCCCGGAAGCCAAGCGACAGATGCTAGCATGCGGCAACCAGTGCCCCAAAAACTACTCGTGCGGGCATCGCTGCGTCGACGGCTGCCACGAAGGACCTTGTCCGAGGGAGGACCTCTGCGACAAGAGGGTCAAGGTCTGGTGTAAATGTAAGCGAATCAAGAGGGACTTCTCCTGCGAGGTGGTTCGCCTCGGAAAAGCGACGGTAGACTGCGACGGTGCGTGCCTGAAACGAAAGGAAGAACGGGAGCAGCTCCAGGCGATGGAGCTGGAGAAGCGGAAGGCggaagaggaaacgaggaacCGCATGGAGATAGAGAAGTTTGAGAGGAAGTTCAAGCCCAAGCGCAGGGGGAAGGCGAGAAATCGGTTCGACGACGGGACGAAAGAAAGTAGGAACTTCTTTTGTCGGAAGATTTGGTTACCCGCTACAGCTATCGTGGCAATTGCCGTCGCGACGGTTTACGTCACCGTTTACGTTTAA
- Protein Sequence
- MNKFKRVQAQNRASIERHLEEHPVTSSSSEDEDEGTTELLEKAVGNVLSSYRFKGGDAEKILSYLSNTFQSGGAVCLICISSVKKVEAIWSCIRCFSFMHLPCIQHWIRDSLNYKREREIAPVWACPKCRAEYRDEEIPREYRCFCGKTSNPLYQPWLIPHSCGEACEKPLEPRCGHRCILLCHPGPCPPCPQMVTSSCYCGKRAGVSRRCNAREWSCGSVCGKLLECAEHRCRDKCHPGDCSPCSETVEAPCRCGAEAEARRCSESKWVCERPCATPLSCGVHRCEGFCHRAGDCGSCPLEGNRTCPCGKKRYVVSCKEEDVPTCGDTCGKRLECGRHSCSMRCHYDGCGQCLQVVVKACRCGAYKKEVACAKEFHCNTKCTRMRPCGRHPCNRKCCDCQARDAPTACEKVCERILGCRRHKCAAPCHPGPCYPCGRTNVVQCRCGGSQLAVPCGTRKRISPPSCDRPCGLASGCHHPQPPHRCHQGPCPPCRAVCDLAHAACGHACPAICHARVWVRPTEEGASRPVVAVGPWQRRPPKSERRVLRALPCPPCEVPVPVTCFGEHETLPRPCHLAVPDSCARECARPLTCANHRCARLCHRPGAPACDSCERPCELPRPEGCTHACARPCHPAPCEPCQRLVKVSCHCGINALYRRCSELTLASPEAKRQMLACGNQCPKNYSCGHRCVDGCHEGPCPREDLCDKRVKVWCKCKRIKRDFSCEVVRLGKATVDCDGACLKRKEEREQLQAMELEKRKAEEETRNRMEIEKFERKFKPKRRGKARNRFDDGTKESRNFFCRKIWLPATAIVAIAVATVYVTVYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -