Oabi000351.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- ZNF131
- Assembly
- GCA_000612105.2
- Location
- NW:1208734-1226071[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0041 0.22 11.2 0.7 2 21 576 595 575 599 0.89 2 13 0.00071 0.038 13.6 0.2 3 23 614 635 612 635 0.93 3 13 0.084 4.5 7.1 1.3 1 23 653 677 653 677 0.93 4 13 0.14 7.6 6.3 1.5 2 23 694 716 694 716 0.93 5 13 0.085 4.5 7.0 0.2 1 21 721 741 721 742 0.94 6 13 2.2 1.2e+02 2.6 0.4 2 20 764 782 763 785 0.84 7 13 7.2e-05 0.0039 16.7 0.4 1 23 804 825 804 825 0.99 8 13 0.00037 0.02 14.5 0.2 1 20 831 850 831 852 0.94 9 13 2e-05 0.0011 18.5 4.2 1 23 870 892 870 892 0.98 10 13 0.0021 0.11 12.1 0.0 1 23 897 922 897 922 0.94 11 13 0.00029 0.016 14.8 1.3 1 23 931 953 931 953 0.99 12 13 4.3 2.3e+02 1.7 2.9 3 21 967 987 966 989 0.88 13 13 0.0042 0.23 11.1 1.5 1 21 995 1015 995 1020 0.93
Sequence Information
- Coding Sequence
- ATGGAGAGctacgaggacgacgacgacaccCACTTCTGCATAAAGTGCCACCTGACGATCAGCGGCCTCGAGAATTACGTTCGGCATCGACAGTCAGGATGTCGGCCTCCGGAGGACAAGTCAGAAGTGGTCCACGACCCCCCATCGACGCCAACGACGGTCTCGTATCCGGAGATCCTGAACGCCGACGCCTTCTTCAACTCCCTGGAGCTGCAGAGCAGCACCAAGACCAACGCCAGGAGGTCAGGAGCTTTGTCGGAGCGAGGGAAAAGATCGGGACGTCTGGAGTCCCGGAAGAAGAGCAGGAAGGTCCATGGAGATCAGGAGGATATGTCGGGCAAGGAGAAGCTGTCGAACATGATGCCAGTCGTGACGGATCTGGATGACCCCACGGATCATTTGGTGATCCCATCTCTGGTGGGCTTCCCAGACATCGTCACGTCGACCGGGAAGCCCAGCTCCTCCACGGTCACCAAAAGCCAAATGCACGCCACCATGAAGATGGAGTCGACGAGCTATCACGGAAAGTCCGAGGGCCTCCAGGAAGCTTCTCTGGAGAGCTTGATGACCAAGCCGGAGAGAAAGCGCCACGAGGAGAGTCAGAGGATGGAGCAGGAACAGGTGTGGCTAGAGGACACCATTCTGGCGGATTTGGTTACCGAGAACAAAGACATGGCCCATTCGAGTCTGGGGCGGTACTCCGAGTTCGAGTATCATCAGGAGGAGGACTCCGACGAGGAGAGTTTGGACGAGGATCTAGTAGATGACTCGTACTCCGATACCGATGAAGAGCATCCCCCTAGGGGACACACCGGTGGCAAATGGAAGCCGGGTCTTGGCAACATCACTCAAGAGGTCATGGCCCAAATGGGCGATGACGATGGGGATGCCGATGACGACCACCATGAGCACCCACCGCTGTCGCACACCGGGGGGAAGTGGAAGCCCACTGACGCTCAGACTCAAAAAGCCGAAGAGTACGAGGCACAAGAGTTACCTGGGCAGCCTCCACCTGGACACACGAGGGGGAAATGGGTCCCTGGTGCTAGAATCGACGCTGGCACAGGGTACTGGTGTGCACCCTGTGGGAGGAAACTGGCCTCCAAATTGATATACAACAGACACTTGCTCTCCGACTTGCATGCGAGGAGGAGCATCCAGGAGATAGATGGATCCCTTCATCTGCCACGCGACTTGGGCAGCTTCCTTCAAAGGAAGTCTAGCCGACATCAGAAGGCTTTGGCATCGCGCATTTTCCAGACTTCGAAAGCAGAGCCGAGAGAGGAGACTTCCAAGAGAACTCGcaagagggagaaggaaatCGTGTGGTGCGAGATGTGTCACGCTCGAGTCAGGCGCCAGCAGATGGGGAAGCATCTTTTGTCGCACTACCACTGCAGGGTGGCCGGTTCCACCCCCTGCAGCCCAAAGTCGAAGAGGTTCCTGCTGGAGAACATGGCGAACGTCGTGAGACAGTGTCCCTTTCAGTGTGCACCATGTCGGTTCTACTGCAACACCGAGGACACCTTTCTGCTACACTGGCGGTCCCAATTTCACGCTGACACCGTTGATAAGATCCGAGGGAGCTACAGGTGCACCCCTTGCGACTTCTGGTGCGCCAGCAACGCCGACATGGAGGTCCATCTCGAAAGCCAGGGTCACCGGGACTTAGCGTTCATGATGAACGGTTCCGTTCCTGTGGTGATCCGTCGCGAGCAGGCCTTGGTTTGCCAAACTTGCGGTCGCCGTTTCCGGTACAACCTCCAGCTCTACTTGCACACCAAAGAAACCGGACACGAAAGCGTAACGGGGTCGGACGAGTATCAGCAGAGGATCGCCTGTCCCTTGTGTGGCCAAGTGGTTCGCTCCCTGGTATCTCTCCAGCGTCATCAACTAGCTTGCCATATTAGCCCCGACCACGAAAGAAATGTCAACGAAACAGACCCACCGGCTCCCTACTTCTGCTCGTTCTGTTCCCTGAATTTCTCCACGGCCCGAGATGCCGTGCTTCATCGTCGCACATCGCGACACAAAGAAATCAGGTCTAGGAAGTTCCAGAAAGGGTCGTTACAGTTCCGGGAGTGTCCACACTGTGGAGAGAAACATTCGGATTTGGCTTCCTACAAGGAACACCTACTTCAGACCCACACTGAACTTTGCCACAGGTGTCCACGTTGCGGACTCCTCTTCGCGCTGTCCCAGGATGTCACAAGACACACGAAGGAAAACGAGTGCGCAGAAAAGGACCACCTTCCCCAGGACCTTTCCAGTGGCCTGGAGGATACGTGGAGATGCACCACGTGCCCCTTTGCGACCAACTCCCACTCGGAGCTGATCTTCCACGAGGCCTTGCACACCGGTTACGTGGAGGTCGGCAAGGATGAGTCGAGCGACAAGATCTCGAAGAAGTACCGGTGCCCACTCTGCGAGAAGGAGTTCCCCAAAGTGTCTTTACGCAACCACATCAGGAGCCACACGGGCGAGCGTCCTTTTCCCTGCAGCAAGTGCTACGCCTCCTTTTCTCGAAGGTCCGGTCTAAACGCTCACGAGAAGGACTGCGTGGGGATCCCTCCAGGATCGTCCCAGGAAGCGTTCCGGCGTCGGGATTACGTCTGCTCGGAGTGCAATCACGCCTTCTACACAAAGCACGCACTTCGTCAGCACATGCTGCGCCATGCCGGAAAAAAGTACAAATGTGGACTTCCGGGATGCCCCACCGTCCTCAGGACCGCCTCGGAGCTGAGGTCTCATCGACTCCTGGTGCACGAGACCGCGACCACCGGCCGGAAGTATCGGTGTGCCTCCTGTCCCTACGCAGCGAAGACGAGCACACAGCTCAGGAGGCATAGAAGGAAGCACGAGGACTCTGAGGACCTGCAAGCCACTCCTCAGAGGATCTGTCCATATCCGAACTGCGAATTCAGGACGAAACTGGGCTCTCACCTGCGGCGCCACCTTCGCTGCCACACCGGCAACAAACCCTACAGGTGTCGCCACTGCTCCTACGCCAGCAATAACTTGGAGAACCTCAGGAAGCACGTCCTCTCGACGAATCTCCATCCTGGGAAGAGCATCTACGAGTGCAGCAGCTGCATCTCCTCGGAACGGACTCCGTTCTGCACCAACTTCGCCAAGGAACTTCGCGCTCATCTCCTGGAAGCTCATCCCCAGGAGTTCCCGACCCCGGGTCATGCCGCCAGACACGTATCCAGGatcttcgacgtcgacgaggctGATCCTGGGTCCTCCTAG
- Protein Sequence
- MESYEDDDDTHFCIKCHLTISGLENYVRHRQSGCRPPEDKSEVVHDPPSTPTTVSYPEILNADAFFNSLELQSSTKTNARRSGALSERGKRSGRLESRKKSRKVHGDQEDMSGKEKLSNMMPVVTDLDDPTDHLVIPSLVGFPDIVTSTGKPSSSTVTKSQMHATMKMESTSYHGKSEGLQEASLESLMTKPERKRHEESQRMEQEQVWLEDTILADLVTENKDMAHSSLGRYSEFEYHQEEDSDEESLDEDLVDDSYSDTDEEHPPRGHTGGKWKPGLGNITQEVMAQMGDDDGDADDDHHEHPPLSHTGGKWKPTDAQTQKAEEYEAQELPGQPPPGHTRGKWVPGARIDAGTGYWCAPCGRKLASKLIYNRHLLSDLHARRSIQEIDGSLHLPRDLGSFLQRKSSRHQKALASRIFQTSKAEPREETSKRTRKREKEIVWCEMCHARVRRQQMGKHLLSHYHCRVAGSTPCSPKSKRFLLENMANVVRQCPFQCAPCRFYCNTEDTFLLHWRSQFHADTVDKIRGSYRCTPCDFWCASNADMEVHLESQGHRDLAFMMNGSVPVVIRREQALVCQTCGRRFRYNLQLYLHTKETGHESVTGSDEYQQRIACPLCGQVVRSLVSLQRHQLACHISPDHERNVNETDPPAPYFCSFCSLNFSTARDAVLHRRTSRHKEIRSRKFQKGSLQFRECPHCGEKHSDLASYKEHLLQTHTELCHRCPRCGLLFALSQDVTRHTKENECAEKDHLPQDLSSGLEDTWRCTTCPFATNSHSELIFHEALHTGYVEVGKDESSDKISKKYRCPLCEKEFPKVSLRNHIRSHTGERPFPCSKCYASFSRRSGLNAHEKDCVGIPPGSSQEAFRRRDYVCSECNHAFYTKHALRQHMLRHAGKKYKCGLPGCPTVLRTASELRSHRLLVHETATTGRKYRCASCPYAAKTSTQLRRHRRKHEDSEDLQATPQRICPYPNCEFRTKLGSHLRRHLRCHTGNKPYRCRHCSYASNNLENLRKHVLSTNLHPGKSIYECSSCISSERTPFCTNFAKELRAHLLEAHPQEFPTPGHAARHVSRIFDVDEADPGSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -