Oabi006758.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- -
- Assembly
- GCA_000612105.2
- Location
- NW:124206-138623[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.028 1.5 8.5 0.1 1 19 218 236 218 238 0.95 2 29 0.17 9.2 6.1 2.2 1 23 246 269 246 269 0.93 3 29 2.1 1.1e+02 2.7 1.9 2 23 281 303 280 303 0.90 4 29 0.012 0.64 9.7 4.1 1 23 611 634 611 634 0.96 5 29 8.9 4.8e+02 0.7 0.7 5 23 641 660 640 660 0.89 6 29 0.0022 0.12 12.0 4.5 3 23 668 688 668 688 0.98 7 29 1.1 60 3.5 1.0 1 20 715 734 715 736 0.83 8 29 0.00012 0.0065 16.0 0.5 1 22 833 854 833 854 0.95 9 29 0.031 1.7 8.4 0.2 2 23 862 884 862 884 0.96 10 29 0.38 20 5.0 2.0 2 23 895 917 894 917 0.93 11 29 0.0078 0.42 10.3 0.1 2 23 968 990 967 990 0.96 12 29 0.039 2.1 8.1 0.6 1 23 1000 1023 1000 1023 0.95 13 29 0.012 0.65 9.7 0.0 1 20 1061 1080 1061 1081 0.94 14 29 0.0036 0.19 11.4 0.8 1 23 1089 1112 1089 1112 0.92 15 29 2 1.1e+02 2.7 9.2 1 23 1121 1144 1121 1144 0.93 16 29 0.16 8.4 6.2 0.0 2 20 1201 1219 1200 1221 0.86 17 29 0.00033 0.017 14.6 0.7 1 23 1228 1250 1228 1250 0.98 18 29 2.4 1.3e+02 2.5 0.4 1 19 1260 1278 1260 1283 0.88 19 29 0.00022 0.012 15.2 0.6 2 21 1372 1391 1371 1392 0.94 20 29 0.00078 0.042 13.4 0.5 1 23 1399 1421 1399 1421 0.98 21 29 0.024 1.3 8.8 1.2 3 23 1433 1454 1432 1454 0.93 22 29 8.9 4.7e+02 0.7 0.8 1 23 1587 1610 1587 1610 0.92 23 29 0.19 10 5.9 1.0 2 23 1688 1710 1687 1710 0.84 24 29 0.048 2.6 7.8 0.8 1 20 1998 2017 1998 2019 0.93 25 29 0.0017 0.093 12.4 1.5 1 23 2024 2046 2024 2046 0.98 26 29 7.5 4e+02 0.9 0.0 3 23 2083 2103 2082 2103 0.94 27 29 0.047 2.5 7.8 0.3 2 23 2109 2131 2108 2131 0.95 28 29 0.0008 0.043 13.4 0.9 1 23 2134 2157 2134 2157 0.96 29 29 1.3 69 3.3 1.5 3 19 2166 2182 2164 2185 0.91
Sequence Information
- Coding Sequence
- ATGGCTCGTGTTCTGGTTTATGAAAGAACCGTGAAGGCACTGATCAGTGCTATCAATGAAAACTACAAATCTGATcATAATTCCATtggaatatttacaaaaattaagaAGGAACCTGAAGATATATCGGAATGTCAAAATACTAGTAAGAGTAACGATGGCATACAGGAAACCTTGAATAATTCAAAATCTTGGGTCGATGGAAATATAATGCATAATGAAAGCACCATTGATCGGTTACACCCAATGGTTCAACGTTCAATGGAGAGTTCCACGACGCAAGATAATTCTACCAtttttgagagaaaaaataaaaaacttaATGTTCCAAACCCGTCACCTTACGTACTCCATGAAGGTTTCCAGGTAGCACGTGCAGACAGATTTACTGCAAATATTTTGGAAACCACTACGAAAGAcaataatgaaaaaagaagaaagagaaaaagaagccTTGAAAACTTGGCTCCCGATCAAGTCCCAGAAGAGGATACGCGTAGTAAAAAAACGAGGCTTAGTACTTCCTTGCGACGTAGGAACAGTGACGGTACGTGGTTACAAGTTCTTCAAGAAAATAAAccaaaaggaagaagaaaaacgacTTCGCACATGCCCAACGATCTTATTCCACGGTCTGATGAAATAGACAAGTTCTACTGTAATATATGCCAATTATCTTTCGACAGTCGTGCTCAGATAGTCAGACacaatgtaatttatttaaaacctTGTAACTTCCACTGTCGTCCTTGCAATGTTCGGTTTCCATCGCAAACAAAATTGACAGAGCATCGAAAGTCAGCACATTCTCGGGCAGCTATTTCGAACAGCACGTTAATAATGTGCGATTGGTGCAAgcaaaaatttcttaaaaagtCTGTATTACAAGctcatttgtttcatttccATACTGCTTTAGACTTTCATGAACCAAGAGGTGCAGTTTCCATAAACTTACAAGAGATCCGTTCGTTAGGGCTTCATCCGCGTGTACGTACTCGGAGAATACATTCTGAGAATAATCTAGAAGTTCGAAAATCAAGGCCTGATCGGAAGCTTAGACAAACGATATTGACTGAGTTTTTACAGTCATCCAGTGTACGAGAAGAGCAAGAATCTTTAGTTAATGCCGGACAAGTTAATGGTAGTGTTTCCACACAAGTGGACCAGTACATGGAACCCTGTGCAGATCCGAATGACGTTAGATCTACGTTGGGACATGTGATTAAAGATTTCGAAACAGAAGACGATCGAAAAGCTTTGCAAAGTGGAGAAACGTCAAACAAAGAGTGGTCTCGGAACAACTTCCAACTGGATGTGACGGAATATTTTGAGAGAATCGACAGAAGATTTTCTTCAAAGTGGCGCGACAAGAGCGCTGGCGACGACATGGATCAACATCTTATCTCTCCTCCGGAGACTGCAATTATTACGAAAATTTCTTCCGAGGAGTCTGGGCTTTGGCCAGCCGATGAAagattgaatttaaaatatttcctgtcGGATGGCACAACTGAAAATCAACCGCTGCCCGAATCGACTTATAAACTCAAGATGTGCAGAGTCCATTTAGTAAGACTCAACGAGAGCCTTATCGGCACCCAGCATCGCCGTTGTTCCACAACCTGCGACAGCACTACACAAACGATACTTAAAGACGTACATCCGAACTATCCTGTACTTCCGGTGAAGATTGAAGCACCGGACCCAAATTTACATATAGCAAAACTGAAAAGAGTTGAAATCAAATTGGTGAAATTAGAACATTTAGGATACACGATACCTTGTCCTTCTCGCGAACTAAGTACTCGGTTACTTCAGGAAAAAGCATTTAATTGCAACATTTGTGAAAAAACGTTCCATTCGAAAAACGAGAAGAAGGTTCACGTTAAATCGTTTCATGTTGCATACATGTCCAGTATTTGTAGAGCGCGATGCTCTTCGAAGCGGTTGCTGCTTTCTCATTACCTCGATCAGCATCCCATGTACAAAAAGAATGGTTGTTGCATTTGTCGGAAAAGATTCGCTAATCGAGAGAAGTTGAAGAAACACTTACTGATGCATTGCATCAAGGTAATCCGATCGAAAGATGACTGGCTCCCGATAGACATCGACACACGGTGCaacttgaagaaaaaaatgtacaagtGTTCCGGCTGCAGAAAAGGGTTCTGGTTATCGACTTGCTTGAACGAACACGAGAAAGTTTGCAAATCAAGGAAGAGACAAATGGAAGATAAACCGAACAATAAGTCTGCAAATGGGAAATCAAAGGGCAGTCTTGTGAAAACGTACAAGGACCTGTTGCAGTTGCAGAGTCTTAGGGAAAGGATATTATCAACGATCGAcgcgaaagaaagagaaacatCCACTACAAAAACTCCCCGATCCCGAGGTTTGGAAGAACCGAACGACTCGAACCCTCCTCTTGGGCGGACCTCGGGAACTGCCTCTGTCGAAGTAGAAAGTAACGATCGGTCCAAATGTTCTTCACGGTTTCCATGTGAAATATGCGGCACGCAGTTCCACACGTTAAATAATCTTCGGCGCCACGTGCAAACGTATTTGCAGCTGCCGAGGGAAACTTGTTACATCTGCGGAACCCTGTTCCCGAATAGGAGGCGACTGATGATGCACGTGAAAATAGCGCACGTAAACGACTCCACCGTAGTCTACAACTGGAGATGCGAGATCTGTAATCATGGGTTTGCTAAGAAGAAAATCCTGCGGATCCACGTGATGCACACCCACTACAATTGTATGGCAACCGAGGCAATGTTTAAGGAAGGGTCTGCGAACATTAACGTCAATCGCATGACGTGTTACACGTGCGCCGTTCCATTTAAAACCGAGAATCTGATGGTCGATCACTTCGAACACTTCAACAAAGCTCTGGAGTGGTCTTGCGAGGTATGCAATATCGTCGTCAAAGGGAGGTACGCATTAGAGAAGCACAGGAAATCGGAGCACTTCGGGGAGATGCAACAGAGTTACAATTTCATGTGCGTGCTCTGTACGGAAAGGTTTCCGGAACTTCAGCAATTGCGTGCCCACACGATGCACGTGCACAGGCACGACGGCCGCCCGGCACCTCCGATGATAGGAACGAGTGCCGGTTTTCCTGGGGTACATGAAATCCCTACCAAACGTGAGGACGTTCCGACGACCGGCTTCGGGAAACACGTTTGCACGGTCTGCCAGTGGTCGTTCCCCGAGGAGGCCGATTTGACTGCCCACGTGGACGAGAACTCCAACGACGGCGACTATCAATGCGACAGATGCGGCAGAAGGTGCCGCACGCTTACTTTGCTGGAGGGTCACCTAGCCGCGAGTCATGGAAACGACGGAACAAATGACGAGCACGCCTGCCATTTCTGCGGAGAAGTACTAAAGACCCACTCCTGTCTGATATCTCACGAGAAGCATTTCCATCCGGAGTCCCTTAACCAGCCCATCGGCACCCACTCGACGCTAGAAGACCTGGCAAGACCGTCCCTTGAATCGGTTCTGAAAGGCGCCCTCGCTCTTAACGACGACGAGTGCGTCATCGAGGTCGGCAGCGAGACCGATGGCGAGGCCACGATACGAGCGGGCCAGCTGAAGTGTTCCGTGTGCGGACAGGTGTTCGAGAGCGAATTTATTTTGATGAACCACTTGTTGGAGTACTCCAACGACGGTAAATATCCCTGCGACGTGTGCGACAGGAAGTTCGTATGGGCGTCGCATTTGGAAGAGCACAAGCGGAAACACGGCCAATCGGACGACAAGTCCCTGGACTTTTGTTGTCCCGTTTGTCTCGAGGGATTCGAGTCCATGCTCGCGTTGAACGCCCATGGGGTGCACTTACACGGGGGGGAATTTGTCCACGCCGTGGTCGCGAGAAATGCCGTCGACGACGCTCCGAATGGGAATCGTCCAGAGGACGATGGGTTGGGGGCAACGACTGGAGAGGAGCTCGATCAGTCGTCGGCGTTGCTGTACAATGATTCGACACCTCTGATTATACCAAACCGCGGGTCAGGCTTCCGAAATACCGTGAATGTAATTCATCCTAAATTGTTAACGGGAGGCTCCACCACGAGCACGGATAATGCAGTTATCGGGAACTATATCAAGTGCAGGACGTGTAATCAGAATTTCGCAAATAAGGACAATTTAGCGAAGCATCAAATGAGATTTTGGAACGAGGGGAACTATTCCTGCGAAATATGTGGGCGTAAGTATCCTTGGCCATCTCTGCTGAAATACCACAAACGGAAACACATCCCGATGTATACTAACTCCATGAAGGAGATGTGTCCCATTTGCGGGGAGAAGTTTCACACGACCGCTTCCGCGAAAACGCATATCATACATTTGCATAAGGGCTATGACGTGGATCCAATCAAATTAACGGGGAATAAGCCTGGTTCCAACTCGAAAAACGTCGACTCGAGTCGGATGCGACATCCGGTAAATTCGAAGGTCGGGAAAGACTCTCCCAATTTAAATCCCGTCTTCAGCAGCGTCGATTTCGTTAACGAGAGCCAAGAAGAGAGTCAAATGTTCGAGCTCGACGCGGACACCACGAAGGAGGACTGTAAGGATCCTCTTGCCCTCGATGATATCTGTAAAGTCGAAGAACTCGCAGATGCTCTGAATGCCGGAGACGTTTCGCAAAGTGGCTCGTTctcgggaaacgcggaaatgCCCGCGAACGTTTCGTTACCGGAATCTACCGCAGCTGTAAGCAGCGAAGCTTCGAGTTCTTCGGgcaaatataaatgtttcatgTGTTCGGGAGAATACGCGACCGTCagcaaatttcaatttcatcttGAGACGGTCCATTCTCATTATGCCAGCCGCTCTTTTCACTCCGCACGCATGAAGACCAGCGGGGCTGTCCTGAACAGGATGCAAGAGGAGCTTGCAACCCCTGGAACACCAGAAAACCTCACCTCTATCTTGAAGCAAGCTCTGACTGCTCCGTGTATTTCCGATCCTTGCTTTTGTGAATCCTGTAGACAAAAATTCCCAGATCAGCGGACCAGTTGCATCGGGGATGTTCCACTAGGACAAGTCTGCGATATTTGCGGCATGTCCTTCGACAATGGCTACCTCTGCAAGAAGCACAAAGAGAGCGTTCACGCTCGACGGACGGATGCTGCGGTAGGAGATCAAGATCGGAATCGTTCGAGCCAAGATCACCCTGTCCACGAGGACGACCGGAGGGCACCGAGACGAATCGTCTCAGGACCGGTTGAAATTACGGATGTCTACGAGGAAATCGAAATTGTCGACCCCATGTCCCATAACGCAGGGAATAACGCGGAAGACGTTTCCTCGAAGACGTCCGCACCAGACGGTCCGAGGGATGGGACGATTTTGAAAGTGCTTCGCCACGGCGCCGTTGCGAAGAAACAGCAAATGGGTAAACTCAAGGTTAAACCTTTCGCCAAGATTGTGGAAAATTTAACCATCGGTAGCCTGTCCAAAAGGAAGAGCAGCGCGGATGGGTACATCCACGGTGAGACCGGAGCGGGACCCAGTAACGACCGAAACTTCTTCCAACCCACTTTGGAAGCGGCTACACGGTCGGATTACTCCAAGAGGAATCCCTTATCACACAATGTACCGAAGAGGATGCACTCCCTGGACGAGGGGGCAGGAAACCACTACTACGATCACACGTATCACCGTTCAAAGTTGCAAGATTCGGCCGTGGGACGCACCCGCGGTGCTACCTCTAAACCTCCCGACTCGATTTCATCCCCACACGTTAACGTATCTCGAGAATCGGTGATTACGTCGACCGCAAATCCGACTTTGTACTCTGCCCCGCTCAACTTGGTCGTACCATCGAAAAGTTATGCCACGTCCGAAAATCCAGTGGTCACTTCGGTGATTAACCCGCGACCAGACCCGACAGACAACGGCCccgaatcagctgatccgcgAAAAGCCACGCCAGAGAGTCGCGAATTGGTCGCGACCAATTCAAACGTCATATACAAGTGCCAGATTTGTTTAGTCCATTTTACCGACAAAAGTAAATGGGACAAGCACGCGAGCACTCGTTGCTGGTTGTTTCGGTGTGCAACGTGCAAGATGAGCTTTGCGGACGACCGTTCGTTGCAGAAACACTTCAGGGAGCACTTCTCGAGGACGTGCCAAGTGTGCAAGAGCGTCTTCTTCAGTTGCAATGCATTCGAAGAGCACTCCAAGTATTGTTACAACTCTCCGGCTTTTGCAGTCGAGCGGCTTTGTAGAGTATGTAACAGGGTCGTTCCTCCAGGGGTCGACATGCAAAATCACATCTTCATGCACAAAACCAAGTTGATCAAGTGCGGTATCTGTAAGCGGCAGTTCGACACCGTATCCGATGCGGCCACGcatttcaggattttccatCAACCCTTCCGATGCAACGTTTGTAAAGCTTGCTTCGTCGAAAAGGAGACTCTGGCGACACACATTAAGGATGTCCACGACCCACAAGCTCGAGTGTGCTTCTGTGCCGTGTGCAAGGTTGGCTTTCGTTCTTGGGTGGACTACAACGTGCATTCGTGCGACATTTGTTAG
- Protein Sequence
- MARVLVYERTVKALISAINENYKSDHNSIGIFTKIKKEPEDISECQNTSKSNDGIQETLNNSKSWVDGNIMHNESTIDRLHPMVQRSMESSTTQDNSTIFERKNKKLNVPNPSPYVLHEGFQVARADRFTANILETTTKDNNEKRRKRKRSLENLAPDQVPEEDTRSKKTRLSTSLRRRNSDGTWLQVLQENKPKGRRKTTSHMPNDLIPRSDEIDKFYCNICQLSFDSRAQIVRHNVIYLKPCNFHCRPCNVRFPSQTKLTEHRKSAHSRAAISNSTLIMCDWCKQKFLKKSVLQAHLFHFHTALDFHEPRGAVSINLQEIRSLGLHPRVRTRRIHSENNLEVRKSRPDRKLRQTILTEFLQSSSVREEQESLVNAGQVNGSVSTQVDQYMEPCADPNDVRSTLGHVIKDFETEDDRKALQSGETSNKEWSRNNFQLDVTEYFERIDRRFSSKWRDKSAGDDMDQHLISPPETAIITKISSEESGLWPADERLNLKYFLSDGTTENQPLPESTYKLKMCRVHLVRLNESLIGTQHRRCSTTCDSTTQTILKDVHPNYPVLPVKIEAPDPNLHIAKLKRVEIKLVKLEHLGYTIPCPSRELSTRLLQEKAFNCNICEKTFHSKNEKKVHVKSFHVAYMSSICRARCSSKRLLLSHYLDQHPMYKKNGCCICRKRFANREKLKKHLLMHCIKVIRSKDDWLPIDIDTRCNLKKKMYKCSGCRKGFWLSTCLNEHEKVCKSRKRQMEDKPNNKSANGKSKGSLVKTYKDLLQLQSLRERILSTIDAKERETSTTKTPRSRGLEEPNDSNPPLGRTSGTASVEVESNDRSKCSSRFPCEICGTQFHTLNNLRRHVQTYLQLPRETCYICGTLFPNRRRLMMHVKIAHVNDSTVVYNWRCEICNHGFAKKKILRIHVMHTHYNCMATEAMFKEGSANINVNRMTCYTCAVPFKTENLMVDHFEHFNKALEWSCEVCNIVVKGRYALEKHRKSEHFGEMQQSYNFMCVLCTERFPELQQLRAHTMHVHRHDGRPAPPMIGTSAGFPGVHEIPTKREDVPTTGFGKHVCTVCQWSFPEEADLTAHVDENSNDGDYQCDRCGRRCRTLTLLEGHLAASHGNDGTNDEHACHFCGEVLKTHSCLISHEKHFHPESLNQPIGTHSTLEDLARPSLESVLKGALALNDDECVIEVGSETDGEATIRAGQLKCSVCGQVFESEFILMNHLLEYSNDGKYPCDVCDRKFVWASHLEEHKRKHGQSDDKSLDFCCPVCLEGFESMLALNAHGVHLHGGEFVHAVVARNAVDDAPNGNRPEDDGLGATTGEELDQSSALLYNDSTPLIIPNRGSGFRNTVNVIHPKLLTGGSTTSTDNAVIGNYIKCRTCNQNFANKDNLAKHQMRFWNEGNYSCEICGRKYPWPSLLKYHKRKHIPMYTNSMKEMCPICGEKFHTTASAKTHIIHLHKGYDVDPIKLTGNKPGSNSKNVDSSRMRHPVNSKVGKDSPNLNPVFSSVDFVNESQEESQMFELDADTTKEDCKDPLALDDICKVEELADALNAGDVSQSGSFSGNAEMPANVSLPESTAAVSSEASSSSGKYKCFMCSGEYATVSKFQFHLETVHSHYASRSFHSARMKTSGAVLNRMQEELATPGTPENLTSILKQALTAPCISDPCFCESCRQKFPDQRTSCIGDVPLGQVCDICGMSFDNGYLCKKHKESVHARRTDAAVGDQDRNRSSQDHPVHEDDRRAPRRIVSGPVEITDVYEEIEIVDPMSHNAGNNAEDVSSKTSAPDGPRDGTILKVLRHGAVAKKQQMGKLKVKPFAKIVENLTIGSLSKRKSSADGYIHGETGAGPSNDRNFFQPTLEAATRSDYSKRNPLSHNVPKRMHSLDEGAGNHYYDHTYHRSKLQDSAVGRTRGATSKPPDSISSPHVNVSRESVITSTANPTLYSAPLNLVVPSKSYATSENPVVTSVINPRPDPTDNGPESADPRKATPESRELVATNSNVIYKCQICLVHFTDKSKWDKHASTRCWLFRCATCKMSFADDRSLQKHFREHFSRTCQVCKSVFFSCNAFEEHSKYCYNSPAFAVERLCRVCNRVVPPGVDMQNHIFMHKTKLIKCGICKRQFDTVSDAATHFRIFHQPFRCNVCKACFVEKETLATHIKDVHDPQARVCFCAVCKVGFRSWVDYNVHSCDIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -