Oabi007779.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- -
- Assembly
- GCA_000612105.2
- Location
- NW:236874-243884[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.3e-05 0.00072 19.0 0.1 3 23 843 863 842 863 0.98 2 17 0.035 1.9 8.2 1.0 1 19 869 887 869 889 0.93 3 17 0.31 16 5.3 0.7 2 23 896 917 895 917 0.95 4 17 0.00013 0.007 15.9 1.4 3 23 926 947 925 947 0.98 5 17 0.0013 0.071 12.7 2.2 1 23 954 977 954 977 0.96 6 17 8.1e-05 0.0043 16.5 0.7 1 23 983 1006 983 1006 0.94 7 17 1.1 59 3.5 2.5 2 23 1014 1034 1014 1034 0.94 8 17 5.8e-07 3.1e-05 23.3 2.3 2 23 1040 1061 1039 1061 0.97 9 17 1.4e-05 0.00076 18.9 0.3 1 23 1067 1089 1067 1089 0.99 10 17 0.00068 0.036 13.6 2.4 2 23 1101 1123 1100 1123 0.95 11 17 0.016 0.84 9.3 3.4 1 23 1129 1152 1129 1153 0.95 12 17 0.0059 0.32 10.7 4.9 2 23 1174 1196 1173 1196 0.95 13 17 0.0015 0.079 12.6 0.9 2 23 1203 1225 1202 1225 0.96 14 17 4.9e-05 0.0026 17.2 1.0 3 23 1234 1254 1232 1254 0.96 15 17 0.001 0.055 13.1 2.3 1 23 1260 1283 1260 1283 0.96 16 17 0.28 15 5.4 3.2 2 23 1290 1311 1289 1311 0.96 17 17 0.0082 0.44 10.2 2.6 1 23 1317 1339 1317 1339 0.98
Sequence Information
- Coding Sequence
- ATGAGCCTCGCGAAGGAGGCTACTGATTATCTTGGTAAAGATGAAGAAGAATCCAGGAAGACATCTAGGGATGAGATTGCCGAATCCACTTCTGAAACCGAGAGTATAGACTGTAGTCGGGGAGAAGTACAGGAAAGAGTTTCGATTGATCGGGGAGATTGTTTTGAAGTTGACTCTATCGACTCGGGTAAGGACACCGATGGAATGGTGCATAATTATCCAGAGGTGCCTCCCTTCAAAAGTAAAACGGTAGCATACTCGGTGCGAGAGGGACGATTTTTCAAAGGGAGCAAGTTGAAAACGATACAAAAGTCGGATGATCCAACCTCGGCAAAGAGCGAAGAGTGCAACGTTCCACGGGTATATGACGATCCACAATTCTATGACGATtcagaatttgaaaataaaaatgatacagCATCGGATGGTGAAGAAAGCAAAGATGTACATTTTATATCGAAGGAAAATCAAAGCGAGGATACCAGGAACCGAGATCATGACTACATTTGTCTAAACCGAGAGCCAAAagtaaaaacattttcaagtACAAATAACAGAATCGAAATGTCAGTGGTGGACAGCAACACTCGTCCATCATCGAAAACAATTGACAAAGATGTGTCCATTATGGAGAAGTCTCCAGGACGAATAAAAGACATTAGTGAACTAAAGAAAGTGATTCCACgagtgaaattattatcacCACAAGCTCAGAGCTTAAATGAGCTGAAGAAGCTGACTACTCAAAGTGAAAACATTCAAACTAACAAAATGATCAACTCGTCCAACGACGTGAAGCAGCAGTTACGGAAGTATTGTCGAACTTGCGCTGGTTCGAAGCTCCCACTCGTTGACATCTTCAGTGAAAGGGGTTTACAAATGAGACTAGAGCAACAGATGCGTCACTTGGAAGAGATAAATCAGGACGATAGCCTCTCCACACAAATGTGCATGGACTGCATCTGTGACTTAAAAATGAGTTACAAATTCTTTATGCAGATCAAGAAAGCAGAGATCAAATTGCGGTCGATCTGTGTGACATTAAACGACGTAATGATGAACAAAGTAGCCAAACCTGTGAATCGGTCGCCTACCGTGGAGGTACAAGCGTTGCAGGCTGGCACAACCAAGGTTCAACAAAAGCCTCCGGAACAAGACATACTGCAAACACAAATTGCCATTAAGCCAGACAGCGAGGACCAGGATTCTCCCCCATCATTCACCACGACTACTTCCAAGATCTTCACCTACCCAGCTCGACATAAGATGAGTTCTCAAGAATCCATCGATAACTTAAAAGCTCTGGACATTAAATCAGAGCCCGAAGATATTTCAACCCATCAGAGTGATGATAACGAATCAATAGAAGAATTCGATCCTGACGATCCTTGTATACGTTTGGACAGTTCGGACCCAGAAGACGAGCAGGTTGAAACAAAGAATCCTGTCGAGGTACCTACCGAGTCTATCGAAAATGTCACAATGGATGTCAGTGCTGCAGTTGAGTGTTTGTCCGAAGTGCAGGTAGCAAAGCCTAAGCTGATAGATCCACCGAAGGAGGAGCAGTGGTCGAAGACTCCCAGTATCCTGAAGCGTAAAGCCCAGCCTCCTCCCCCAAAAGCAGGGGACATAGACGTGTCGTTTACCGGTGTTAAGGAAACGAAGATACCGAAGCTGACCTTGTCCAACACGTTAAATGTGGCTCCGACCAAAGAGGATGGAATCATGTACGTCACAGTGAAAGGGTCCAAGCCCAATGAATTGTTACTGGTGAAGGTTAAGAAGATGGACAAGCCAGCGGAGAAGAGCATAACCAATACACCTTTCGATATCAAACCAGTGGAGAAGATCTTGAGGAAGTACGAAGCACTGAGTATGAAAGAGAAGGAGTTATTTCCAGAAAGAGTGAAGAAGCCGGATATCAAGGAGCAGATAATCGAGGAACAAATCGAGGAGTAcaagaagaagagggagaagGTCCTGGGAGTCATCGGAGTGAGAACAGGTAGTCCAGACGACATGGCGATTCGAATCGAGGACACCTTCGTGAAGGACGAAGACATAGTTGAAGTGGAAGTAGAATTGGATCCCGAGGACGACagcgagggggtggcggatACAAATCGATCCGAGGACGACTCCAAAGACGGAGTCAACAGCAACCTCGTTTCGTCCACGGAAAAGACTCACGCGAACACGGTCGCGTATCTGTCCCGGTTAACCAAACTTAGGAAACAATGGGAAAAGACGAAGAAGATGAGAGACAGTCTCCAAAGACGGCTTGACCGCACCTACGACGAGGGAGGCATAGAGAGGCTGGAACGCATCCTGGGGGATCGAGAGAAGAACCTCCAGGACTTCCAGGATTACCTGAAGCAGCGGAAGATCGTCGTGGCGCGGCTGAAGGACGAGGACATAATATCGTTGTACGAGAAGAGGAGCAACGCGAGGAGGCAGTCGAACTTGAGCGAGTGCGTCGACGAGCTGTTGGCAGGAGATACCCCCTTCGAAAGGGACTTGGAGGACTGCGACTACTGCCCGTTGACGTTCTCGTCGAAGGACGCCCTCGCCGAGCACGTCAGGACGCACGACTACAAGATCCAGCACTACTGCGAGGACTGCAACGAGGAGTTCACCACAAACAAGGCGAAGAGGAACCACAACGTGGTGTGTATAAAGAAACTGATATGCCAGTACTGCGACGTGATGCTCGACTCCAAGGGAAAGAAGCGGCGCCACGAGCAGAAGCACTGCGACAACATGTTCGGCCAGCTGTGCGACGTGTGCGGAGAGAAATTCAAGCACCAGGGCACCCTGGACCAGCACCTGAAGACGCAGCACATGGACTGGGAGAAGATCTTCCAGTGTCCGAAGTGCCCGAAGAAATTCGCCTTCAAGCAGAAGCTGACCTTCCACCTGAAGTCGGTGCACACGACACTGAGGGCGTACCTCTGCGAGGACTGCGGCGCCGACTTCAAGAACCCGGCGAGTCTTCGCCATCACAGGATCCGGAAGCACCAGGCGATCGGCAACAAGCGCGAGTGTCCGGTCTGCCACAAACTGGTGCCGTTTTATAGCCTCTCGAAACACATGCACACGCACAAGGCCTACACAATCCAATGTCCGCACTGCGAGAAGATGTTCAAGAACACGTCGACCCTGAAGCAGCACATCAGGATTCACGAGGACCAGAGGCAGTACAGGTGCGAGACCTGCGGGGTCGGGTTCAACCGAAGGGACGGCCTGAGGCTGCACACCAGGGTGCACCTCAAGGCCGACAGTCGTGGCCTGAAAGAATGCTCCTGCCAGGTCTGTGGCGAGAAGTTCCCGAACCACTCGATGCTGGTGATCCACCGCAACCGATTGCACAAGGACGGTAGGCAGTACACCTGCCACATTTGCAACAGGTCCATGATCTCGACGAGGTCCCTCGAGTGGCACATGGCACACatccaccacgaggaggtacCGGGGATGCCGCGCGAAGAGGTCTCCGGGGACTCGCAAAAGAGGCGCGTCTCCTGCCACCACTGCAACAAGACCTTCAAGACGGAGATGATCCTGCGGACCCACATCAAGAACTCGCACACCGAGAAGGAGCCCACCAAGTGCCTCGACTGTGACCTGTACTTCACCTCGGAGGTGAGGCTCCGCCACCACATGATGGTAGCCCACAACCGACTCGAGGGCACCCTGGCTTGCCCCCACTGCCCGAAGCGCTTCGTCAACCAGCTCAGGCTCAAGACGCACATGATCTCCCACTCCGAGGAGAGGCCCTACACCTGCGAGATATGCGGCTTCAACCTGAAGACGAAGATTCAACTGATCAAACATCACCAGAACCGGCACAGCGATGAGCGACCTCTGCAGTGTCGGTACTGTCCCTGGCGGTGCAAGCAGGTCAGCGCCCTCGTCTGCCACGAGAGGACCCACACGAACGAGCGGCCGTATTCCTGTAGCGTGTGTCGGCAGAGGTTCAAGTACCTGGGGGACAAGAACAAGCACGAGAGGCGGCACGAGTCCCTGGGTGGGTCGGGGTTCAAGCGCATCGTTGCAGGGCGGAACGGCAAGCAGAGCAGACTTCTTCGAGGCGTTGGTGGAGGCGATGGCGGCAGAGGCGGTGGGACCGACGGAggcggcggcgacgacgacgacggctcCCTTTCGGAGCAGGAACGCGATAGGGAGCGGGTTCGAGAGCGAGGTCGACGTAGCAGGGAACGCGCTAGGATGGCCAGGCGGTCGAGGATGAACGCCGAGGCTGAGGAGGAGCGCGagaacgacgacgacgaggatgaCGATGgcggcgacgaggaggagaccgGCGAGTACGATGGCGAGTACGAGCACGGATACGTCTACGAGcccaaggaggaggaggaagattACAAGGACGGAGTCCAGGTCGGAGTCGAGGTCCAGCTCGAGGAGGAAGGCGGCGATGAGGAGTATAACGAGGGATTCGAGGGAGACGTTAAATTCGAGGCTCCCGAGTACGAGCGCTCCCTGGATCAGGAATACGAGGAAACCTCGCAGGAAGCCTCGGACGCTGCGGAGGTGATTCTGAACATGGAGGAGACCTCTCCGGATTACACGGAGGAGGTGACCACGGACGACGTGGTCGAGGCCACGGACATGATAACAGACCAGATCCTGCCTCCTGGGGCGGTCGTCCACATGGTGGAGCAGCGGGACGATAACGGGAAGATCCAGGTAATTCCCGTGGTCTTCTCTCTGCCCGACCTCGAGGCGGGCGCCGAGGTGAACCTCGCGACCGCCTCTATAATGTACAGTAATTGA
- Protein Sequence
- MSLAKEATDYLGKDEEESRKTSRDEIAESTSETESIDCSRGEVQERVSIDRGDCFEVDSIDSGKDTDGMVHNYPEVPPFKSKTVAYSVREGRFFKGSKLKTIQKSDDPTSAKSEECNVPRVYDDPQFYDDSEFENKNDTASDGEESKDVHFISKENQSEDTRNRDHDYICLNREPKVKTFSSTNNRIEMSVVDSNTRPSSKTIDKDVSIMEKSPGRIKDISELKKVIPRVKLLSPQAQSLNELKKLTTQSENIQTNKMINSSNDVKQQLRKYCRTCAGSKLPLVDIFSERGLQMRLEQQMRHLEEINQDDSLSTQMCMDCICDLKMSYKFFMQIKKAEIKLRSICVTLNDVMMNKVAKPVNRSPTVEVQALQAGTTKVQQKPPEQDILQTQIAIKPDSEDQDSPPSFTTTTSKIFTYPARHKMSSQESIDNLKALDIKSEPEDISTHQSDDNESIEEFDPDDPCIRLDSSDPEDEQVETKNPVEVPTESIENVTMDVSAAVECLSEVQVAKPKLIDPPKEEQWSKTPSILKRKAQPPPPKAGDIDVSFTGVKETKIPKLTLSNTLNVAPTKEDGIMYVTVKGSKPNELLLVKVKKMDKPAEKSITNTPFDIKPVEKILRKYEALSMKEKELFPERVKKPDIKEQIIEEQIEEYKKKREKVLGVIGVRTGSPDDMAIRIEDTFVKDEDIVEVEVELDPEDDSEGVADTNRSEDDSKDGVNSNLVSSTEKTHANTVAYLSRLTKLRKQWEKTKKMRDSLQRRLDRTYDEGGIERLERILGDREKNLQDFQDYLKQRKIVVARLKDEDIISLYEKRSNARRQSNLSECVDELLAGDTPFERDLEDCDYCPLTFSSKDALAEHVRTHDYKIQHYCEDCNEEFTTNKAKRNHNVVCIKKLICQYCDVMLDSKGKKRRHEQKHCDNMFGQLCDVCGEKFKHQGTLDQHLKTQHMDWEKIFQCPKCPKKFAFKQKLTFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQAIGNKRECPVCHKLVPFYSLSKHMHTHKAYTIQCPHCEKMFKNTSTLKQHIRIHEDQRQYRCETCGVGFNRRDGLRLHTRVHLKADSRGLKECSCQVCGEKFPNHSMLVIHRNRLHKDGRQYTCHICNRSMISTRSLEWHMAHIHHEEVPGMPREEVSGDSQKRRVSCHHCNKTFKTEMILRTHIKNSHTEKEPTKCLDCDLYFTSEVRLRHHMMVAHNRLEGTLACPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNGKQSRLLRGVGGGDGGRGGGTDGGGGDDDDGSLSEQERDRERVRERGRRSRERARMARRSRMNAEAEEERENDDDEDDDGGDEEETGEYDGEYEHGYVYEPKEEEEDYKDGVQVGVEVQLEEEGGDEEYNEGFEGDVKFEAPEYERSLDQEYEETSQEASDAAEVILNMEETSPDYTEEVTTDDVVEATDMITDQILPPGAVVHMVEQRDDNGKIQVIPVVFSLPDLEAGAEVNLATASIMYSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -