Basic Information

Insect: Orussus abietinus
Gene Symbol: -
Assembly: GCA_000612105.2
Location: NW:1059974-1066014[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.9e-05 0.001 18.5 0.7 1 23 146 168 146 168 0.95

2 15 0.00071 0.038 13.6 1.1 3 23 176 196 175 196 0.99

3 15 5.5e-05 0.003 17.1 0.1 1 23 318 340 318 340 0.98

4 15 1.2 66 3.4 0.2 1 23 346 369 346 369 0.94

5 15 0.00079 0.042 13.4 2.5 1 23 395 417 395 417 0.98

6 15 0.59 31 4.4 0.0 1 23 432 454 432 454 0.86

7 15 1.1 60 3.5 0.3 2 23 463 485 463 485 0.91

8 15 0.0027 0.14 11.8 2.8 2 19 493 510 493 514 0.95

9 15 2.8e-05 0.0015 18.0 4.4 1 23 520 542 520 542 0.97

10 15 0.011 0.56 9.9 0.1 3 23 549 569 548 569 0.97

11 15 6.2e-06 0.00033 20.1 0.4 1 23 578 600 578 600 0.98

12 15 0.0027 0.14 11.8 0.2 3 23 608 628 606 628 0.97

13 15 0.0024 0.13 11.9 0.2 3 23 636 656 634 657 0.94

14 15 0.09 4.8 7.0 0.0 1 23 671 693 671 693 0.93

15 15 0.0025 0.14 11.8 0.1 1 20 1069 1088 1069 1091 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.9e-05	0.001	18.5	0.7	1	23	146	168	146	168	0.95
2	15	0.00071	0.038	13.6	1.1	3	23	176	196	175	196	0.99
3	15	5.5e-05	0.003	17.1	0.1	1	23	318	340	318	340	0.98
4	15	1.2	66	3.4	0.2	1	23	346	369	346	369	0.94
5	15	0.00079	0.042	13.4	2.5	1	23	395	417	395	417	0.98
6	15	0.59	31	4.4	0.0	1	23	432	454	432	454	0.86
7	15	1.1	60	3.5	0.3	2	23	463	485	463	485	0.91
8	15	0.0027	0.14	11.8	2.8	2	19	493	510	493	514	0.95
9	15	2.8e-05	0.0015	18.0	4.4	1	23	520	542	520	542	0.97
10	15	0.011	0.56	9.9	0.1	3	23	549	569	548	569	0.97
11	15	6.2e-06	0.00033	20.1	0.4	1	23	578	600	578	600	0.98
12	15	0.0027	0.14	11.8	0.2	3	23	608	628	606	628	0.97
13	15	0.0024	0.13	11.9	0.2	3	23	636	656	634	657	0.94
14	15	0.09	4.8	7.0	0.0	1	23	671	693	671	693	0.93
15	15	0.0025	0.14	11.8	0.1	1	20	1069	1088	1069	1091	0.94

Sequence Information

Coding Sequence: ATGGACATGGCTGGAGATTTGGCATTACAGTGGGTTGAGGAAGTTGGGAATGTTATTCACGAGGAGGTTATATGTGGGTTGGAAGCCGAATTGACCACCCCTGAGGAAGAAGTGATAGGAGCATGCGAGGAAGTTGGCGTCGAAGAGGCAGTTCGGTCGCTTCCAGAACCTGCTCCTACTATTCATACCGAGGTCTTAATGATACCTCAAGCCAATGATATGGAATCTATTTATATAGTACCTCAAGATCAAGGTCACGATTACCTTAATATACAGGTTACCGAAGAAGTGATTGCTGACAGTTGGGACAAATCTGCTCCTGACGATGGgGTGGAAATACCGGAGACAAAAGTATCACACGACAACTTACTTGAATACGATGACATGGAGATACCTCTGCCCATTGATCAAGATTCATACACTAATACACGTCCGTACCCATGTGACTTTTGTAGCCGAAGGTTTAGAAAGAAAGCTAATTTAATGAATCACATGGTGGCTCATCAAACGGATCGACCGCATGGCTGTAATCTTTGTGGTGCTCGTTACGTTAGAAAATGTGATTTAATGAATCATTTGAAGATTCATGCATATGCACCTTCTCGTGACGGACTCGAAGATGAAACAAACGATGACGATTCACTTCTGCCTGATGAAGAAGACTCTGCCAAAGGTAGACGCAAAAAAGTGCAATGCAGTGCACCAAGAAAGCGAAAAAACAGTATTGTTGCCAAGAGGCACAATGAAGATGTAAAGGCCGACGTTAACAAATATGGTAATAAATCGTACGACTACATCAATGAAGATATGCGGCTTCTAGAAGAGATGACTAGCAGGAGTTCTGTACGTGGTCGTAATTATACGACAGGTTCTCGATGGACCGAACAGACACCATTGTTAGCCAGTGAAACACCGTCTCCTCGATGGCCAATTACAGATCCTACCAAACCTTATGTCTGCCAACATTGCGGAGTTGGATTTGCTCGGGAGAAAGCTTTAGCGTCTCATGCTCGTATTCATGGTGGTGACAGTCCATTTGAGTGCACTTCTTGTGGTGACATGTTTTGGGATGTAAATACACTGCGGGAACACGTTAAAGTTAAGCATGGGGGTACCGCTCCGTCAGATACAGAGGAGTACGATAACGATGCCACCTATACAGGAGACGAGAGATTCGGCGAATTCTACTGCGATACGTGCAGCGTTCCTTTTCATCGTTTAGACCTTCTTAAGCGTCATCGCAAGATACATGTCAAACAGGAACTCGATATGTTAGAAGGATCCAGTCAACATCACGTGTGCAATGATTGTGGAGAGTGGTTTGAAGAGGCTTTAGCATTACTAGCTCACGCCGAATTACATGCCAGGTTAGTATCCCCTAGTCGACGCTGCCTTTTGTGCGGTGAAAGGTGTCGAGACGATGCAGAAGTGGCGGAGCATGTACAGCAGAATCATGCAGAAGACGCACCACCAAATACTTGTACACTATGTGGAAAGACGTGCAAAGATAAACGAAGCTTGTTGAAACATTCATGGATTCATAGTGCCGATAAAACTTTCAGTTGTACAAAGTGTGGCAAACGATTCCACAGTAAGGCCAGATTGCGAAGaCACATGGTATCGCATCGTAACAAAATGGTGGCATGCGATGAGTGCGGCGAAGAGTTTCCTGATGGAAGGGCCCTCGTCAGCCATCGACATTCGCACAATAAGGATCTTGGTGGCCGATCCTTTCCATGTCGAGAATGTGGCAAAACCTTCGGCAGCCGTAGCTCCCAACAGATCCATATCCGCATTCACACGGGTGAGCGACCGTACGGTTGTCGATTTTGTTGGAAGGCGTTCGCTGACGGAGGAACGCTCCGGAAACACGAGCGCATACACACGGGAGAAAAGCCCTACGGTTGCGCCATATGTCCACGTGCTTTTAATCAACGGGTGGTTTTGCGGGAACACGTCAGAGCTCATCACTCGGGACCAGATCCAAAATGTCATGGAAGTACGATGCCGTATTTATGCAAAGTATGCGGCGACGCGTACTCGACGTCCGAGGAGATCGTCGCTCACATAGTGCAACACTGCGACGATAATACCGCCATGCGAAGGCAACCGCAAACAGGACCGAGGAAGTACAAGAGGAGGCGCAAGCTGAAGCCGCACGAGAGTAACTTAATGACGCGCATAAACGAGAATTACGACACGCTGAACGCACTGTCGGACTCCGACGATAGCGTGAAACGAAAGGTAGGAAAGAAGAACAAGCACAGGTCGAACGTCGAGGAGAGTTACCAGAGCGTGCTAAAGAGCTTCGAGAGTTCTTTGCAGAACCTCAACTCCCTTGTGAGCAACACCAAGATCAATCCCAATAAATCCAAGTTCACGAAAAAGCGGATAAAGCGGGAGGACAAGAGACACGAAACCCCGGCGGCTTATCAGCCCGGCAGGCCGAAGATGATTCACACGCAAAAGACTAGGGTACCGGTGGACGTGGGTAGCGACGGCGTGAAGAAGGGGCAAAAGACCAAGACGATGGTCACGAGGACACCCAAGGTCCTTCCGGGGGAACACAAGCTCGGCATCTTTCCTGGCGGCGAGAGGAACAGGCCTCGGACGAAGAACGTCAGCTACCACGTGGAGGGCAAGCTGCAACCCATACCCGCAACATTCCCTAGCAAGACAAAGGAAGAAGTAGATAAGGTGTCGATGCAGTTCTTGGCGAACATCAAGATCGAGCCCGGCGTCCACAAGGGCACGAGCAATAACCACAGCAACAATAATGGTAGCATTCGCGGAATCGTCGCCGAGCGGAAGACCGAGCTTCCTCACAGGAAGAAGTCCATGATCTTGAGGAAAGTCAGGAAGCAGAGGCAGACGCGCATCAAACAGGAACCCCGGGACGAGGTCCAGGAAAGCGAGACGGCGGTCCCTAACGAGCCGGAATTGAACCTGACCTCTCACCTCATCGATCCTGCCATCGATGGCAGCAACCTGGAAGTCGCGTACGAGGCCAATATCGAGACCGTCGAGGAGGAGACGATATTGCCCGACCTCGAGAGGATCCGTCACTGTGAGGTAGATACCAACAGGGACGTTAAGCTCAATGTGAAGATGTTCGAAACGTTACCGGAGAAGATAGTGTCCACTCATCACGTTCTTGTAAATGTTAACGACGTACCGGAGACTATAATACCAGATGCGGTCGAGTACACTTGTGAAATGTGCTCTGCCGTTTTCTCGAGCCGCCAAGAGCTTTTGGTACACGTACCCATACATATTTGA
Protein Sequence: MDMAGDLALQWVEEVGNVIHEEVICGLEAELTTPEEEVIGACEEVGVEEAVRSLPEPAPTIHTEVLMIPQANDMESIYIVPQDQGHDYLNIQVTEEVIADSWDKSAPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSRRFRKKANLMNHMVAHQTDRPHGCNLCGARYVRKCDLMNHLKIHAYAPSRDGLEDETNDDDSLLPDEEDSAKGRRKKVQCSAPRKRKNSIVAKRHNEDVKADVNKYGNKSYDYINEDMRLLEEMTSRSSVRGRNYTTGSRWTEQTPLLASETPSPRWPITDPTKPYVCQHCGVGFAREKALASHARIHGGDSPFECTSCGDMFWDVNTLREHVKVKHGGTAPSDTEEYDNDATYTGDERFGEFYCDTCSVPFHRLDLLKRHRKIHVKQELDMLEGSSQHHVCNDCGEWFEEALALLAHAELHARLVSPSRRCLLCGERCRDDAEVAEHVQQNHAEDAPPNTCTLCGKTCKDKRSLLKHSWIHSADKTFSCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSTMPYLCKVCGDAYSTSEEIVAHIVQHCDDNTAMRRQPQTGPRKYKRRRKLKPHESNLMTRINENYDTLNALSDSDDSVKRKVGKKNKHRSNVEESYQSVLKSFESSLQNLNSLVSNTKINPNKSKFTKKRIKREDKRHETPAAYQPGRPKMIHTQKTRVPVDVGSDGVKKGQKTKTMVTRTPKVLPGEHKLGIFPGGERNRPRTKNVSYHVEGKLQPIPATFPSKTKEEVDKVSMQFLANIKIEPGVHKGTSNNHSNNNGSIRGIVAERKTELPHRKKSMILRKVRKQRQTRIKQEPRDEVQESETAVPNEPELNLTSHLIDPAIDGSNLEVAYEANIETVEEETILPDLERIRHCEVDTNRDVKLNVKMFETLPEKIVSTHHVLVNVNDVPETIIPDAVEYTCEMCSAVFSSRQELLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -