Oabi004772.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- ZFX
- Assembly
- GCA_000612105.2
- Location
- NW:2152-10189[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.97 52 3.7 0.1 3 23 21 41 20 41 0.94 2 15 0.19 10 6.0 2.3 1 23 901 924 901 924 0.85 3 15 0.00021 0.011 15.2 3.2 2 23 1006 1028 1005 1028 0.97 4 15 0.0022 0.12 12.1 0.1 2 23 1041 1062 1041 1062 0.98 5 15 1.2e-05 0.00063 19.2 3.1 2 23 1065 1086 1064 1086 0.97 6 15 0.0097 0.52 10.0 0.3 1 23 1092 1114 1092 1114 0.95 7 15 1.9e-05 0.001 18.5 4.5 2 23 1121 1142 1120 1143 0.95 8 15 0.085 4.6 7.0 3.7 5 23 1156 1174 1155 1174 0.97 9 15 1.7e-05 0.00092 18.7 1.5 3 23 1181 1202 1180 1202 0.97 10 15 0.0079 0.42 10.3 0.3 2 23 1218 1238 1217 1238 0.97 11 15 5.2e-05 0.0028 17.1 0.7 1 20 1244 1263 1244 1266 0.92 12 15 6.5e-05 0.0035 16.8 2.7 1 23 1274 1296 1274 1296 0.99 13 15 0.0018 0.097 12.3 3.2 1 23 1302 1324 1302 1324 0.97 14 15 3.3e-06 0.00018 20.9 3.9 1 23 1330 1352 1330 1352 0.99 15 15 0.00024 0.013 15.1 7.2 1 23 1358 1380 1358 1381 0.96
Sequence Information
- Coding Sequence
- ATGGACGTCGGCGCCGCGGGTGCCCCGCCAGGGCCGCTCCTCTCCGGAGGGGCCGTCGCGTGCCCGGTCTGCACCCTCTATCTGCGCGAGGGCATCAGCCTGCAGCGGCACCTTGACACGCACCCCAAGGAACAGGTCATAGAGGCCCTCATAAAGGCCAGCACCGGCACACCCCAGACCTTGGCGCAGCCTCCTCAGCCACCTCCGCAGCCACCTCCGACTCCCTCGATGCAGACCTCCCCGGGCGGGCCGCAGGTAACCCAGAGTCCGCACGTCTCCACGCAGTCTCCGTACCCCATAGGTCCCGTCTTCGAGTGCCCTCCCATCGGCACGATGATGCCGCCACAGTTTGCCTCGTTCAGCTACCAGCAGTTCGTCAATAATGGCACCATGATGATACCACAGTACGCAATGGCTCCACAAGCCAATCAGATGATGCAGATGCTGTATAACCCGTACGGCATGTATCAGCAGCAGCAGATCCCTACGGTACAGATGATCTCGCCTATCGCGACCATTCCAGCTGCCACAACTAGGATCAGGCCCGTCATGACGGGGGAGGATGGTGGATCGAGGAGCACAGGGTCTGTCGGGGGAGGCGAGCCTAAGCAGATTCTTCCGGAGATCCTGCCGGAATCGGAaacggagacggagagagtTCTGCCGGATATCGAACTTCCCTCTAGTCCAGTCCCCCAGGAGGAGATGTCGGGGAGGCTGGAAAACGTCGAGGTGTCCACAGTTCATGTGGAGCATCGAGGGCAACAGACGCAGAACTCCACCCCTCAGGAACAAATGGGACGGGAGAATGAGTACAGGGATATGACGGAATCCATCATGGTGGAGAATCATATGGTGGACGACAGTAAAGCCGAAAGCGTCCTGCCGGATATCGAAGACAACGACGACCCCATGGGGATGGTGTCTACCGAAGTGCAGTGCAAGCAAGTGCAGTATGAACGTGCCAGAGAGCAGCTACTTCCCCAGGAGTACGAGAGCGAGGACAAGAACGACGCCGACGGGGTCACGTCGCCGGTCATCGACGTGGAgaacgaggaggaaaagaCGGAGAGCAGCTCCTCGGAGAGGAGCGACGCGGTGGACACCGTATGTATACAGTTACAGGTGGCAAACGAGGAAGCGCCGAAGGAGACGAACCAGCCAGAGGTTGAGCAGCTGGAGAGACTGCTGATCACCATCATGGAGTCCGAATTCAACACCACCCAGGCTCAGGAAAAGGCAACTCCTGGATCCAAGGATTACGAGGAGGACCTAGAGGACAAGTCGATGCTGGACCAGGAGGAAATCACCATCGAGAAGACGGTGATCCCGGGTGACGTGGCGCAGGACAACTGCGATGCCTTGACCTACCCTGAAGTCCAGGACAACGAGAGGCCCGACGACGCCGATGACGGTGATAGGCAGTCGATGTTGCAGCTCTGCGTTTACGTCAGGGAGGAGAATTTCGACCAGACCTATCGGTATAAACACAGCCTGTCCGCCCCGGCGTCGCCGGTTTTGCCGAAGAAGTCACACAGGACGTACTCCGTCCACGCAGAATTCGGGTTCAACGAGAACCTTACGATCTACCCGATGGGCTTCGATGCAGCTGCACTGcacgacgaagaggacgacgaggacgatgaGAAAAACGACATGGAGGACAacttcgacgaggaggacaTGGAGATCGAAGAAATCACCAGCCCTCACACTCCGTACGTCAAGCAGAGCGAGGGTTCAGATAGAGTTAGATCTCATACTCCTCTGTCGACGATCAGTGGCATCTCGGTGCTGAGAGTGCGCACCGACTTGAGCAAGCCTTGCTCCCCAGCGTCGATGCACTCCTTCTGCCACCTGGACACCGACAGTGTGAGTCATGACGAGGAGAGCAACGACACCAACCACGACCTGTCTGCGGAGAAGGACCCCATTGATTGCTCCCACCTGGAGCATGAAGCGAAGGTCACCAGAGATGAGGTTACCGAATGCACGAACAGTACCAAGGAATTGGAGACAGTGAGAGCGTACCATCAGTCTGTCATCACCGAACACCAGAGCTCCTTCCCAGTGATCCATTCGCAGCCACCCCTTATCATCCAGGACACGTACACAATGGGAAGTGTCAGGAGCCCGCGTAACCTTCTCAATCTGTCGGAGTCCACAGACCCAACAACGAGCTTCGAGTCGAAGAACTTCCAGCCTGGAAAGTCGATCCTCCAGAAACCTACCACGGAGCTTCTGAACATCAACGAGGATGCCCACGCGGGACCGATGAACGTCTTTGAGTTCGACGGTCTCCAGATCTTAGTTCCTAGTACATTTATAAGCGAGTCGTCCCAGAAGGCAGTGAGTGCGACGAGCCAGCAGTCGATGGCCAGCAGCGAAGGTGGTGCCGGGATAGACGAGGAGGTTAAAAGTGTCAACATGAGGGCTGATGAGACAATGCCTCCCAGGGGTGAGCTGTCCGAGCAGGAGAGTAACGGCTGTACGGAACATTCGGCATGGCAGCTCTACATGGGCCAAGAGTCATCTCGCATGTCCACCTCGTACGACCTGATGGCAAGGGAGAGCTGGGAGGAGTCCGAGGGTTCGGACAACGAAATTGGCGGGCCTCTGCTGGACAGTCGTTCGCTGGCGACCCACTTCACCTCCAGCCTGTTCTTGGATCGGGATCGAAAGACCCCGACGAAGCGTACGTACAAGTGTCCCCACTGCAGCGAAGTGTTTGACTGCCCTAAGGAACGCAGAGTCCATGCTACAACGGTGCACAAGGAAGCAGGGCCCAGCAGCAGTCGAGACCCCACTGAGCAGCCCGAAGTGAAGGACATCAAACTGCTGGACGGTCGTATGAACGTCTTCGAGGACATCTTCGTGCCAGGGCTGCACATGCAACAAACGTACCACCAGCAACCCCTTCTGCACCAGCTGCAGCCTCCGCAGCAGCAGGACCTGTCAAAGGGCGACGCCGACCGGAAGATCGACAGCCTCGTCATACCACCTGTCGTCGAGGTGACCTGCACCATGTGCAACCAGAGATTCAGCAGCGAGAAGTCTCTCCAAATACACCACCGGAGGATGCACGTCAACGAAATGGCGAAACGAGTGCGCGACACCGCCAAGTGTCAGATTTGCAACGAAGAGTTCCCTTCGGTAGTGCTTTTCAACGCTCACCTGAAGATCCACCCTCTGGAGTGCAGCCAGTGTGGCAAGTACTTCTACAGGAAGCAGAACTTTAAGCTCCACATGAAACGTCATCTGGGTATCAAGCCATTCCCTTGTACGGTCTGCGATAAGGCCTTCCTAACCAAGCAGAAGCTCGACGAGCACACAAATGGCCACACTGGAAATGCTCCGGTCAAGTGCAACCTCTGCAACGAGACCTTCCGCAGGTATTCTAATCTCACCCAGCACAAGAACAGGCACCACttgaacataaaaaaaaaacttaagGACTATATATGCCACTGCGGTGAGGTGTTCCATACCAAGAAGAAGCTCGCCTGGCACAAGGAGACTCACGATGAGAAGCCCAAGGCGTGCACCTACTGCAACGAGAGGTTCATACACATGGCTAGTCTGACTCGGCACATGAGGCGAGCCCATAACAGGAGATTCGTCCCTGATGCCcagagggagagcgagaacGTGGAGTGTCCGATTTGCAAATGCATTTACCTGCGCTCCTCCCTTGCCGTGCACATGCGAGTGCATAACGGGGAAAGGCCCTACGAGTGTCAGGTGTGCTCGAAGGCCTTCAGCACCAAGTGGAACTTGCAACTTCACAAGTGGACCCACGCGGCCCGTAGTACTAAGCCGTTCAAGTGTAATCAGTGCAGCGCCGCGTTCTACCGACACAGCGACTACACCGCCCACATGAACTCCCATCGCAACGTTCGGCCGTACACGTGCAATTACTGTGGCGCCCAGTTCATCCGGAAGTACAACTGCCTAAGACACGTTAAGGAGCACGAGGAGAACAAGGCGTATACCTGTGACGTGTGCAACAAGACTTTCCACCGCTCTTATTACCTTAAGGAACACCTGCGCGTACACTCGGGCGCCAGGCCGTATACTTGTCACATCTGCGGCAAGTCGAGTAGCACCAAGTCGAACCACAATAAGCACGTTAGGATCCACCATGCCCGCGAGCCTGTAAATAcggagaattaa
- Protein Sequence
- MDVGAAGAPPGPLLSGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASTGTPQTLAQPPQPPPQPPPTPSMQTSPGGPQVTQSPHVSTQSPYPIGPVFECPPIGTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPIATIPAATTRIRPVMTGEDGGSRSTGSVGGGEPKQILPEILPESETETERVLPDIELPSSPVPQEEMSGRLENVEVSTVHVEHRGQQTQNSTPQEQMGRENEYRDMTESIMVENHMVDDSKAESVLPDIEDNDDPMGMVSTEVQCKQVQYERAREQLLPQEYESEDKNDADGVTSPVIDVENEEEKTESSSSERSDAVDTVCIQLQVANEEAPKETNQPEVEQLERLLITIMESEFNTTQAQEKATPGSKDYEEDLEDKSMLDQEEITIEKTVIPGDVAQDNCDALTYPEVQDNERPDDADDGDRQSMLQLCVYVREENFDQTYRYKHSLSAPASPVLPKKSHRTYSVHAEFGFNENLTIYPMGFDAAALHDEEDDEDDEKNDMEDNFDEEDMEIEEITSPHTPYVKQSEGSDRVRSHTPLSTISGISVLRVRTDLSKPCSPASMHSFCHLDTDSVSHDEESNDTNHDLSAEKDPIDCSHLEHEAKVTRDEVTECTNSTKELETVRAYHQSVITEHQSSFPVIHSQPPLIIQDTYTMGSVRSPRNLLNLSESTDPTTSFESKNFQPGKSILQKPTTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRTYKCPHCSEVFDCPKERRVHATTVHKEAGPSSSRDPTEQPEVKDIKLLDGRMNVFEDIFVPGLHMQQTYHQQPLLHQLQPPQQQDLSKGDADRKIDSLVIPPVVEVTCTMCNQRFSSEKSLQIHHRRMHVNEMAKRVRDTAKCQICNEEFPSVVLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -