Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_000612105.2
Location
NW:42427-97284[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.75 7.1e+03 -4.3 0.9 61 103 59 92 49 106 0.36
2 4 0.082 7.7e+02 -1.1 2.2 41 124 135 218 130 251 0.65
3 4 0.51 4.8e+03 -3.7 1.3 64 103 409 448 385 505 0.55
4 4 2.2e-100 2e-96 321.2 7.6 1 218 931 1141 931 1141 0.92

Sequence Information

Coding Sequence
ATGGAGTCGCCGCTGGCCCAGGGGCAACTCGTCGAGGCTCCCGAGGATGCCACCCCGGTGAGGTCCCCGACGCCGCCAACGAGGTCGACAAGGACGTCGAATTCCAGGAACGAGAAGGAGTCCCCCGAGGAGGGGACCTCTAAGCCTTCGTCCCCGTGGACGAGAAGTCGCGAGGCCGCCGAggagaggtcgaggtcggagAAATGCTCGGATGACCTCGAGAAGAGGATGCCTCAGGAGGGGTGTCGAGAAAATTCgccgaaggaggaggaggaggaggtgaACGATGAcaatcgaggtcgaggtcgagatgCCGAAACGCATCCGGGGACTTTGGAGGATCGTCCGGACGTTTCGGAAGGTCAGACCTCGCATTCCGGGAGGTCTCCGGATCCGAAGAACTCCGTCGAACAGCTCGACCTCGgagaggtcgatcgatcggaggtCTCCGAGAAGCAATCGGAGGTTCGTCAAGTAACGAGGTCGTCATCTAGGACGGCAAGCACGGAGTCGCCCTTACTCAAGGAGTCCGTCTCGGAGAGGTCACCGGCGAGatcggcgacgacgacgacctcTAGAAGCGAAAAGGAAACTTCCGAAGGGGAGAGTCCTCGGTTTTCGCCCCCCTGGACGAGAAGCGCATCCCGCGAGGTCGTTGAAGCAAGATCGAGGTTGGAGGAATCCACGGTTGATCCGAAGGACCTTACTTCGGAGGAAACATGCCGGGAAAGTCCAACGAATGAGGACAACGAGAAGGTGGTCGGAAAAGACAAAGATGAGGGTCAAGGTCGAGCAAATGAGGTCGATGCAGGTTCGGAAACACAGGAGAGCTTCAAGGAGATTCTGGGAGATCCACCTTTGCCCTCGAGAACGGATGCAACGTTAGGAAACCCCATCTTACAGGCCGACCTCGATAAGGCTGCCCAACCTTTGACGGAAGGACTCGAAAAGCAGTTGGAGATCTGCCACGTGGCCAGGTCAGCGTCGGGAGGACCTTCACCCAGAAAGAGGCCGGCCAGCGACTTCCTGCCTATCAGCCCGGAGATCAAGAAGATTGGAATCGAGGTCTCCGAGGAGAGAGCCAAACAGCTGATGAATGACGTCCGGAGGTTGTCGCCCGTGTTGGTCGGTTTGAGGGAACGGACATTGGGCGAAATTTCCCTGACCCCGGAGTCGAGGATCTTTGAGGAGAGGTCGATCGATAGGACGAACGAAAAGCCGAGCGAGAATTCGGTCGACGACTCAGGGAGaacggggaaaatcgagaccGAGGTCGAAAAGGAGACCTCGAACGCTGAAGAAAATCCGGGgaggtcgtcctcgtcgtcttcGGGGGATGTCGCGGAGTCGCCAAAGTCTCCGGTTTCCTGTTCCAAGGTCGACGATTCTCGCCCCGTGGACTCCAGATCCGGAAGGCGGAAGTTAGAAAAGCAGAACCTAGGCCAGACCCCGGTCAAGGAGCCCAGGAGATCGAGGTCTTCGAGCTTGTCGGATACTCGAAGACTTCGTGAGAAAAATTCGACGTCTGCCGGCGACCTCGATATGCGACTCAAAACCGAAAGTCTTCCCCACGATCGACCCACAGGTGTCAAAAGACCCGGGAAGGTCGAGGCTAGTCCGAAGGACTCGAACGTCGTGGCGATGAAGGAACTAGTGGTGGTGTTATCGCGAGTGAACGTCGCCGGGGACGCGACCCggtcctcgacctcgccggACGCGAAAGTCGCCGGTAAATCCGAGGGCGCTCCCGGGGCGGATCTCAAATCCGGCGCCAATTGTCAGTCGGAGAGTCGATCCCGCGagaccgaggtcgaggtcacCCCCGACAGAGGTAAGGAAAGGCGAGATTCGTTGAGATCGGCCGACGAGAGTCCCTCCGCCAGGAGGAGCAAGATCGTCGTCGAGAGACTCGGGGAGAACGAGGAGCTCGCGCTCGAGGCCGACCTCGGGAACAACCGCAGGGTCATCCACAGGCTGGAGAACGACCACGAGGAGACGGTCGATTCCGccgcctcgacctcggccgCCCCCAAAGCCGTCGTCGAGGACGCGAACGCGACCCCCGGGGCAGTATTAGCTCCGCCGACCtcgccctcgacctcgccctcgacctcgacctcgggctCGGCGTCGATGTCTTCGGAGCCCGCCGAGGACTCTCGGGTTTTTGACCCCGCCCAGGGCGGCCCCGGCTCTCCGGAGGAGCTCAACGAGGTCAGCGACTCCTGCGAACCGCAGGAGTTCGTCGACACGGAGACCGAGACGGAGACCGGCTCGGACAGCTCCGAGGTCGCCTCGATCGCCAGGATGGACTGCGACGAGGTCATCGCCGACACCATCACCTGTCCCGAGAGCGACCGTCTCAGCTGCGACGACCTTTCCGGGGAGATGATCACGAGGCTCGAGCCGGAGAGGCCCGAGGCCTTCACCGAGGACTCCGCCGAGAGCCTCGCCCTCGCCGCGGGCGCTAGGGACGAGGTCAGGTCGGACGGCAGCGACTCCGGCCTCGGCAGCGAGATGCCCGGGGACTCCGGGCCCGCGCCTGCCCCCGAGAGCGACTCGGAGACCTCCTTCCTGGACAGGATACCCGACGACATCCTCACGGACAAGGAGAAAGGCGCGCCCCAGCTGTCCGGGTTCGCGGGTTCCCCGGTGACGAGCGTCGCGGAGCCAGCCCCGCAGCCGGCGCTGCCGTGCTTCCCGGAGCCCCCGAAGAGCAATCTGAAGCGCAGGCTGGCCGACTGCACGGACGGCGAGCCCTCGCCGAAGAGGACCAACAACGAGGACAccaagaagaagaggagcaTCCAGTTCGACGCAGTCACCGTTTACTACTTCCCCAGGGCTCAAGGCTTCACCTGCGTACCTTCCCAGggtggcaGCACGCTGGGTATGAGCGCGATGCACACGCACGCCGAGAGGTTCTCGTTGACGGAACACGCGGCCGAGCAGCGCCGCCTCCATCGGGCCCGACTGGCCCAGCTGAGGACGGAGAGGGCGGCCAACTGCACGGCCGAAGCGGCTTCCAGCTCGGAGGATCCCAGCGATGATACCGACGAGGAGCCCAGCGACAACGAGGAACTGGACATCGATAGCTACTACTTTCTCCAGCCGGTCCCCACCTGGCAGAGGAGGGCCCTCCTCAGGGCCGCGGGGGTCAGGAGGATAGACGCCGTGGAGAAGGACGAGTGTCGCGATATCAGGGCTAGCAGGGAACACTGCGGGTGCGGATGCAAGGGGTACTGCGACCCCGAGAGCTGCCCCTGCAGCAGGGCCAACGTCAAGTGTCAGGTCGATCGGGCGGGCTTCCCCTGCGGATGTTCCCGGGACGGGTGTGCAAACAGCTCCGGACGCATCGAGTTCAACCCCATGAGGGTGCGCACTCACTTCATCCATACGCTGATGCGGCTCGAGTTGGAGAAGAAGCAGCGGGACGAGGAGCGAGACCACGAAGGGGACCACCAGGCGAATCGGGGCCCTCTCAGGGAGGGTAACCTCGGCTCGATGATGGACTCCAACGAGGGATGCGTGAACGGCGGAGGGTTCACGACTTTGCACTACGAGAGTCCGGAGAACAGCAGCAGCGGTCCCTGCCAGACGGAAGTTCCGGGTGCTCGAGAGGACAGCCTCGACCTGTACGCGATCAGGGACGACTGCTACCCGAGCGAGGACACAGTGGACGGTGCCCAAAATTCCCAGAGAAAACTGCATCCAGAGTTTGGTCAGGCCTTTCAGAGCTTTCCAGTCGGCCAACCTGGGCACAACGTGGCCTTCCAGCAGACCTCGAGCTACCAGGACTACCAGAGTTACCAGAACCtgccctcgacctcgaggtccCAGTTCCAGCCCCAGTTCCAACCACTACCGGGAACCCCTCCAGGGTTTGGGCACTACGCGGCTTATGGTCAGGACGCCGGCCCGATTCCAGGCCCTTGCCAGGCCCACGCGACGTCGTACGAGGCTTCCGGGTTTCCCCAGGACGAGGTCTCCGGCTCTCAGTATACGAACCTCAGTTCGGTGCAGCCTATGCACGCCGTCGTTCAGCAAATGGGCAAGCTGGAGCCGTTTTCCGAACTCTTGGCCGGGAGGTACTCGTACTACGGCGAGGTCGAGCCCCATCCTGGACACCACGGGACGTATCATGGGAATCCTGGTACCAAGGTCGAACCCGAGAAGAATGAGGTCGCGGAGAAGCAACCCGAGAATGGGGAGGAGTGCGATGAGAACTTTGGCGAGATCATCAAGAAGTCTATAGTAGAGACCGTTTCGGCTTAG
Protein Sequence
MESPLAQGQLVEAPEDATPVRSPTPPTRSTRTSNSRNEKESPEEGTSKPSSPWTRSREAAEERSRSEKCSDDLEKRMPQEGCRENSPKEEEEEVNDDNRGRGRDAETHPGTLEDRPDVSEGQTSHSGRSPDPKNSVEQLDLGEVDRSEVSEKQSEVRQVTRSSSRTASTESPLLKESVSERSPARSATTTTSRSEKETSEGESPRFSPPWTRSASREVVEARSRLEESTVDPKDLTSEETCRESPTNEDNEKVVGKDKDEGQGRANEVDAGSETQESFKEILGDPPLPSRTDATLGNPILQADLDKAAQPLTEGLEKQLEICHVARSASGGPSPRKRPASDFLPISPEIKKIGIEVSEERAKQLMNDVRRLSPVLVGLRERTLGEISLTPESRIFEERSIDRTNEKPSENSVDDSGRTGKIETEVEKETSNAEENPGRSSSSSSGDVAESPKSPVSCSKVDDSRPVDSRSGRRKLEKQNLGQTPVKEPRRSRSSSLSDTRRLREKNSTSAGDLDMRLKTESLPHDRPTGVKRPGKVEASPKDSNVVAMKELVVVLSRVNVAGDATRSSTSPDAKVAGKSEGAPGADLKSGANCQSESRSRETEVEVTPDRGKERRDSLRSADESPSARRSKIVVERLGENEELALEADLGNNRRVIHRLENDHEETVDSAASTSAAPKAVVEDANATPGAVLAPPTSPSTSPSTSTSGSASMSSEPAEDSRVFDPAQGGPGSPEELNEVSDSCEPQEFVDTETETETGSDSSEVASIARMDCDEVIADTITCPESDRLSCDDLSGEMITRLEPERPEAFTEDSAESLALAAGARDEVRSDGSDSGLGSEMPGDSGPAPAPESDSETSFLDRIPDDILTDKEKGAPQLSGFAGSPVTSVAEPAPQPALPCFPEPPKSNLKRRLADCTDGEPSPKRTNNEDTKKKRSIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSAMHTHAERFSLTEHAAEQRRLHRARLAQLRTERAANCTAEAASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPMRVRTHFIHTLMRLELEKKQRDEERDHEGDHQANRGPLREGNLGSMMDSNEGCVNGGGFTTLHYESPENSSSGPCQTEVPGAREDSLDLYAIRDDCYPSEDTVDGAQNSQRKLHPEFGQAFQSFPVGQPGHNVAFQQTSSYQDYQSYQNLPSTSRSQFQPQFQPLPGTPPGFGHYAAYGQDAGPIPGPCQAHATSYEASGFPQDEVSGSQYTNLSSVQPMHAVVQQMGKLEPFSELLAGRYSYYGEVEPHPGHHGTYHGNPGTKVEPEKNEVAEKQPENGEECDENFGEIIKKSIVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-