Oabi002430.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- bab1
- Assembly
- GCA_000612105.2
- Location
- NW:2009667-2097904[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.2e-18 1.4e-14 52.6 0.0 1 43 365 408 365 410 0.95 2 3 3.9 6e+03 -3.8 2.3 6 15 490 499 488 500 0.88 3 3 3 4.8e+03 -3.5 0.0 4 11 536 543 534 545 0.82
Sequence Information
- Coding Sequence
- ATGACGCAGCAAAGCGGCGCTGGGTCGCCCCAGCAGTTCTGCCTCCGGTGGAACAACTACCAGAGCAACCTGACGAACGTGTTCGACCAGCTGCTGCAGAGCGAGAGCTTCGTCGACGTGACCCTGGCCTGCGACGGGCACTCGGTCAAGGCGCACAAGATGGTCCTCTCGGCGTGCAGCCCCTACTTCCAGGCCCTCTTCTTCGACAACCCCTGCCAGCACCCCATCGTCATCATGAAGGACATCAAGTGGCCGGAGCTCAAGGCGGCGGTCGAGTTCATGTACAAGGGCGAGATCAACGTCTCCCAGGAGCAGATCGGCCCGCTCCTCAAGGTCGCCGAGAGCCTCAAGATCCGCGGCCTGGCCGACGTCAACAGCGAGCACGAGCTGACCTCCCGGCCCGCGGCCGCCCTGGCCGAGGAGTCGGCCCTCGGGGGAGGCCTGCCCCGCAAGAAGCGGCGCCGCGCCTCCGGTGACCGCTCGCCCCTGCCCGGTAACAGTCCCGACCGgaccgacgacgccgacgccgggcCCGACGGCCACCCTGGCGCCAACCCCGGTCCCGGCGGCTCCCCTGGCGCCTCGCTGCCCGCCATCTCCGTCACGCCGCAGATCAACCTGCAGGAGCTGCCCGTGTCGCTCTCGCTGCCGCCCCCGCACCCCCAGCACCCCTCGGCGCCCCAGCAGACGCAGACCTCCGCTCTCGGGCACCACGTGGCCGGCCACGTGACTTCCGGCCCCCACGCCGCCGTCAACGCGCTCTCCgtgcagcagcagcagcagcagcacccgcaccagcagcaccagcagcagcacccgcagcagcagcagcagcagcatcAGCAGCAGCAGGCCGCCAACGCCGCCAACGCCGACGACCTGGAGATCAAGCCCGGCATCGCCGAGATGATTCGGGAGGAGGAAAGGGCCAAGTTGTTGGAATCGTCCCACGCTTGGCTCGGTGCCTCCACCTCCAGTATAGCCGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGGTTCAGGGAGCGCGGGCCCCTCAAGTCCTGGAGGCCCGAGACCATGGCCGAGGCCATCTTCAGCGTCCTCAAGGAGGGACTCTCTCTCAGCCAGGCGGCTAGGAAGTACGACATTCCGTACCCCACGTTCGTCCTCTACGCGAACAGGGTGCACAACATGCTGGGACCAAGCGCGGACGGCGGGGCCGGTGAGTACCTCAGGCCCAAGGGCAGAGGGCGGCCCCAGAGAATCCTGCTGGGAGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTGGTCTTCAGGGACGGACACTCGGGCCACATCGTCAAGGAGGAGCCGACCACCATGTACCCCAGCCTGGCGAACTACGCGGCCTGCAACGGGCCCGAGGGGGCGGTGAGCCCCGGGGCCGCTGCGGCCGCCGCGGTCGCCGCAGTCGCCCAAGGTCTCCGGCACCAGATGTGCAACATCGTGGCGGCGGCGCAGTCCCAGCAGGGCGTGCACGACATGATAGGCGCCAACCTGACCTCGAACCTGTCGTCGAACCTGCCATCGAACCTGCAGGCCGCGATCCAGGCGAgccagcagcagcaacagcagcaacagcagcagcagcaccagCAACACCAGCACGGAGGCCCCGGGGCCAACGGGCAGAACAGCAACACCGGCAACCAGGGGGGCAACAACAGCGGCAACTCCCCCCTGAATCTGGGCATGGCGAGCCCGGGGTCCGGGGGGCCTCCGGAGAGCCCCATGGAGAGTCCCCTGGCGAGCCCCCTGGGCCCTCTGATCGACCCCGGGCACATGCCCAATAGCGTGGAGGTCGGCATCGGGGTCAGCGGCATGACCTACAAGCCCGCCCGCACCTTCGTCAGCCCCCGGCCTGAGAACCTCTTCCAGGAGGACATCGCCGACCTGGTCAAGAGCCCCCACGGGCTCAAGGACAAGGATAAGATCCCCGTGAAGCTCGAGCCGCTGACCGACTCCCGCTGCGAATAG
- Protein Sequence
- MTQQSGAGSPQQFCLRWNNYQSNLTNVFDQLLQSESFVDVTLACDGHSVKAHKMVLSACSPYFQALFFDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNSEHELTSRPAAALAEESALGGGLPRKKRRRASGDRSPLPGNSPDRTDDADAGPDGHPGANPGPGGSPGASLPAISVTPQINLQELPVSLSLPPPHPQHPSAPQQTQTSALGHHVAGHVTSGPHAAVNALSVQQQQQQHPHQQHQQQHPQQQQQQHQQQQAANAANADDLEIKPGIAEMIREEERAKLLESSHAWLGASTSSIADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSGHIVKEEPTTMYPSLANYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCNIVAAAQSQQGVHDMIGANLTSNLSSNLPSNLQAAIQASQQQQQQQQQQQHQQHQHGGPGANGQNSNTGNQGGNNSGNSPLNLGMASPGSGGPPESPMESPLASPLGPLIDPGHMPNSVEVGIGVSGMTYKPARTFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01120298;
- 90% Identity
- iTF_01120298;
- 80% Identity
- iTF_01120298;