Oabi002371.1
Basic Information
- Insect
- Orussus abietinus
- Gene Symbol
- KBTBD12
- Assembly
- GCA_000612105.2
- Location
- NW:1523213-1526076[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.6e-09 2.6e-06 26.2 0.0 2 38 212 248 211 254 0.87 2 5 1.1e-10 1.7e-07 29.9 0.0 5 39 265 298 263 305 0.85 3 5 0.027 42 3.1 0.0 21 34 332 345 318 350 0.80 4 5 0.39 6.1e+02 -0.7 0.1 32 45 360 374 360 374 0.91 5 5 8.9e-12 1.4e-08 33.4 0.1 5 39 377 411 376 415 0.94
Sequence Information
- Coding Sequence
- ATGTGCGAAGTCGATGGCCAACCTCAAATTAACGAGAGTTATTGTTTCAAGTGGGCCGACTATCAGAACCACTTGTCAGGAGTGGTTCGTCAACTTTTGGAGGAAGACTGTATGGTGGATGTCACTCTCTCCGCTGATGGAGAACGCATTCATGCACACCGAATAGTTCTGTGCGCTTGCAGCACTTTATTTCAAGTAAATTTTGGTTTGACAGAATTTAGAgaaGTTTTAAGCCAGGCAACTGAAGACCATCCGACAATAATTATAAGCGACATATCAGCTAGAGATATAAGGTCGATAGTTGAATTTACTTACCATGGTGAGGTTCGCATTCCTGTAGAGAACATTGGGAATTTGTTGGATGCTGCACATTCATTAAAGATATGTGGATTGATGGAAATCGATGGCTTGGATGAAAATGAGACAATTGGAAGTGGGAAAGACATTAACGAAAATAACACGGATAATACAGAGCCTTTAGTACAATTAAATGAATCGGAGAATAAAGTACTTGATTCTTTGGAAAGTGAATATGAGACGAGTCAAGGACAGTTGGAACAAACAATTCCTAATGACATAGTAGTTAGtaagagaagaagaaggaaaagagatTCGGTTAAACGAGAGTATAACGAAGACATGTTAGCAGCTGCTATTAATGATCTTCGTTCTGGTCAAACATTGATAGAAGCTTCAACTAAACACAATATTCCACGCTCTACTCTCTATATGCGTGCTAAGGCATTGGGCATTCATTTAAATGCATCTAGAAATGAGTATCCTATGGAATGCATGAAGGCAGCTATAAATGCTGTTATTGGTGGTGCAAGTTTACAAAATGCTTCAGAGATGTTCAATATTCCTAAGACTGTACTATGGAGGCGAATACAAAAAGAAGGCTATCAAATTTTGCGTTCTGAAATGAAAAGGTCTTATGGCTCGGATAAAAGAGAGGCTGCTGTTAAGGCTCTCGAAAGGGGAGAGAATCTTACAAAAGTTGCTCTCAAATTTCAgATACCTAAGACAACTCTCTTTCGAGACAAGGCTAGGTTAGTGGACGAAGGTAAGTTACCTGTGTCATtttggaagaaaagaaagtcaGAGAACGAAGAGCTAAAACGATTACGGTTGGAGGAGGCTGTAGCTGCTTGTAAAGAAGGGAAAATGTCTCAAGCCGCGGCCTCCATGACTTATCGCATTCCCAAAACCACGATATGGAGGCGGCTGCAACAAGATAGCAAGAAACATGTCCATTCGTTGCATGCAAAGAGGCAAAGAAAATTAGCTGACTCTGCAAACAATGTTAAAATGAAATCAGAGCCAGAATCTGGTTATTCCTATTGTGAGGTTTCTTCAGAAATACCTATAACATATATAGATGAGAACAGCATACCAGAAGATTCTGTGATAATCTTGACAACGGAAGATATGGACGGAATTAATTTAGAAGGAAGACAGATTATCGTTAACTCGGAGCCCGGACAAGATTATGCACCTTGTACATTAAATATCGAGGGTAGTTCCACCTATCAACCGACTGAAAGTTAG
- Protein Sequence
- MCEVDGQPQINESYCFKWADYQNHLSGVVRQLLEEDCMVDVTLSADGERIHAHRIVLCACSTLFQVNFGLTEFREVLSQATEDHPTIIISDISARDIRSIVEFTYHGEVRIPVENIGNLLDAAHSLKICGLMEIDGLDENETIGSGKDINENNTDNTEPLVQLNESENKVLDSLESEYETSQGQLEQTIPNDIVVSKRRRRKRDSVKREYNEDMLAAAINDLRSGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPMECMKAAINAVIGGASLQNASEMFNIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALKFQIPKTTLFRDKARLVDEGKLPVSFWKKRKSENEELKRLRLEEAVAACKEGKMSQAAASMTYRIPKTTIWRRLQQDSKKHVHSLHAKRQRKLADSANNVKMKSEPESGYSYCEVSSEIPITYIDENSIPEDSVIILTTEDMDGINLEGRQIIVNSEPGQDYAPCTLNIEGSSTYQPTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01120329;
- 90% Identity
- iTF_01120329;
- 80% Identity
- iTF_01120329;