Basic Information

Insect: Orthosia incerta
Gene Symbol: -
Assembly: GCA_948252205.1
Location: OX411769.1:9980001-9993906[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.34 47 6.0 0.1 3 23 113 134 111 134 0.91

2 8 0.00051 0.071 14.9 0.0 1 23 186 209 186 209 0.94

3 8 2.5e-05 0.0034 19.0 0.5 2 23 215 237 214 237 0.92

4 8 0.0017 0.24 13.2 0.3 2 23 243 265 242 265 0.96

5 8 0.00036 0.049 15.4 1.0 1 23 272 295 272 295 0.97

6 8 0.00011 0.015 17.0 0.4 2 23 302 323 301 323 0.94

7 8 1.4e-06 0.00019 22.9 0.9 1 23 330 352 330 352 0.99

8 8 7.2e-06 0.001 20.7 0.6 1 23 358 380 358 381 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.34	47	6.0	0.1	3	23	113	134	111	134	0.91
2	8	0.00051	0.071	14.9	0.0	1	23	186	209	186	209	0.94
3	8	2.5e-05	0.0034	19.0	0.5	2	23	215	237	214	237	0.92
4	8	0.0017	0.24	13.2	0.3	2	23	243	265	242	265	0.96
5	8	0.00036	0.049	15.4	1.0	1	23	272	295	272	295	0.97
6	8	0.00011	0.015	17.0	0.4	2	23	302	323	301	323	0.94
7	8	1.4e-06	0.00019	22.9	0.9	1	23	330	352	330	352	0.99
8	8	7.2e-06	0.001	20.7	0.6	1	23	358	380	358	381	0.95

Sequence Information

Coding Sequence: AACGACGATGCCGTAAAACAGACACCAGAAGCGACCCCCGACCCCCAGTATGTCTATATAGGAACCGATGATGCCGCAAAAAAGACACGAGAGGCAGAAAGACAACGTAAAGATGAACTTACAAGATTTATGACAGTCCTTATAGAGAACACTTCGATTCTGCCCTTCAGATGGTCAGCAAACAAGTACATGTGCTTTTACTGCTGTTGCGACTTCCTCGATAGCACAAAACTGAAAGAGCACACCATAGAAGAACACAAAGGTGCAAATCTTAAAAACGTTCTCAGATCCTTAGTATCAAGCAGTCGAGTAAAGCTGGATACTTCACAAATGATCTGTAAGAAATGCAACCAACAATTTCAGGTTTTCGACGAGATTTTGGCCCATTTAGCAATATCACACGAGTTTAAGTTTGACGGAGAAATAGGCAAATGTATGTTCACTTTCAACCTGTCCGATGAGAGCATGTCGTGTAATGAATGTGGACAGGATGACTTCAGATTCTTTGCCACGTTACTGAAACATGCTCACAAATTCCACAATAAAAACAAGACATTTCTCTGTGAGATATGTGGACAAGGGTTTGTTGGTCGAGCAAATGTGACCAGTCACATAAAAAACATACACAAGAACAAAGAGCTAAAATGTGAGAAATGTGACCAAGTATTCAAAAACTACTACACTCTACAAGTCCACCTCGATCAGGTACACAAGACCGAGAGTTTAAAATGCCCGAAGTGTCCCGAGATTCTTACGTCACAATACATGAAGAAACGACACTTAGCGACGGTGCATGATGTCAAAAAGTTACAGTTCAGCTGTGACCAATGTGACCTGGTTTATACAATGAAGAGTCGACTTGTTCAGCATCAGCAACGGACACATTTGAAAACGAAAACCGTTACCTGCGACATTTGCGGTTTTAAGGTCTTTAACAACGATCTATTGAAACGCCATATGGTCCGCCATGATGATAACTTCAGACCTTATGAGTGCAAAATTTGCGAGAGAGCTTTTCAGAGGAAGAAGACGCTGAATATTCATCTTAGGATACATATGAATGATAAAAGGTATGCTTGTAGAGAGTGTGGAAAGGCTTTTGTTCAGGTGACCAGTTGGAAGCTGCATATGAGGGTGCATCATGGCGTTGAAGGAGCGGTTTGGAATTGA
Protein Sequence: NDDAVKQTPEATPDPQYVYIGTDDAAKKTREAERQRKDELTRFMTVLIENTSILPFRWSANKYMCFYCCCDFLDSTKLKEHTIEEHKGANLKNVLRSLVSSSRVKLDTSQMICKKCNQQFQVFDEILAHLAISHEFKFDGEIGKCMFTFNLSDESMSCNECGQDDFRFFATLLKHAHKFHNKNKTFLCEICGQGFVGRANVTSHIKNIHKNKELKCEKCDQVFKNYYTLQVHLDQVHKTESLKCPKCPEILTSQYMKKRHLATVHDVKKLQFSCDQCDLVYTMKSRLVQHQQRTHLKTKTVTCDICGFKVFNNDLLKRHMVRHDDNFRPYECKICERAFQRKKTLNIHLRIHMNDKRYACRECGKAFVQVTSWKLHMRVHHGVEGAVWN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01117690;
90% Identity: iTF_01118690;
80% Identity: -