Basic Information

Insect: Orthosia incerta
Gene Symbol: -
Assembly: GCA_948252205.1
Location: OX411750.1:6781651-6797065[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.4 3.2e+02 3.3 0.1 3 23 112 132 110 132 0.95

2 20 3.1 4.2e+02 3.0 1.3 2 23 136 158 135 158 0.91

3 20 1.6 2.2e+02 3.9 3.9 2 23 209 231 208 232 0.91

4 20 0.0029 0.39 12.5 0.5 2 23 385 407 384 407 0.95

5 20 0.037 5.1 9.0 0.1 1 20 415 434 415 436 0.94

6 20 0.0076 1 11.2 0.6 2 23 446 467 445 467 0.94

7 20 8.1 1.1e+03 1.7 1.5 1 23 483 506 483 506 0.84

8 20 0.0055 0.76 11.6 2.7 1 23 515 538 515 538 0.94

9 20 6.8 9.4e+02 1.9 0.8 8 23 588 604 580 604 0.90

10 20 2.7 3.7e+02 3.1 0.2 3 23 618 639 617 639 0.83

11 20 3.9 5.4e+02 2.6 1.9 1 23 644 667 644 667 0.93

12 20 5.1e-05 0.007 18.0 1.8 1 23 673 695 673 695 0.96

13 20 0.00022 0.03 16.0 1.8 1 23 702 724 702 724 0.98

14 20 8.6e-05 0.012 17.3 2.3 1 23 729 751 729 751 0.96

15 20 0.00094 0.13 14.0 2.2 1 23 757 779 757 779 0.98

16 20 4.8e-07 6.6e-05 24.4 1.9 1 23 785 807 785 807 0.98

17 20 0.00038 0.052 15.3 3.5 2 23 814 835 814 835 0.98

18 20 0.003 0.41 12.5 0.7 2 23 843 865 842 865 0.97

19 20 2.6e-05 0.0036 18.9 0.3 1 23 870 892 870 892 0.97

20 20 0.0021 0.29 12.9 1.6 2 23 899 921 898 921 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.4	3.2e+02	3.3	0.1	3	23	112	132	110	132	0.95
2	20	3.1	4.2e+02	3.0	1.3	2	23	136	158	135	158	0.91
3	20	1.6	2.2e+02	3.9	3.9	2	23	209	231	208	232	0.91
4	20	0.0029	0.39	12.5	0.5	2	23	385	407	384	407	0.95
5	20	0.037	5.1	9.0	0.1	1	20	415	434	415	436	0.94
6	20	0.0076	1	11.2	0.6	2	23	446	467	445	467	0.94
7	20	8.1	1.1e+03	1.7	1.5	1	23	483	506	483	506	0.84
8	20	0.0055	0.76	11.6	2.7	1	23	515	538	515	538	0.94
9	20	6.8	9.4e+02	1.9	0.8	8	23	588	604	580	604	0.90
10	20	2.7	3.7e+02	3.1	0.2	3	23	618	639	617	639	0.83
11	20	3.9	5.4e+02	2.6	1.9	1	23	644	667	644	667	0.93
12	20	5.1e-05	0.007	18.0	1.8	1	23	673	695	673	695	0.96
13	20	0.00022	0.03	16.0	1.8	1	23	702	724	702	724	0.98
14	20	8.6e-05	0.012	17.3	2.3	1	23	729	751	729	751	0.96
15	20	0.00094	0.13	14.0	2.2	1	23	757	779	757	779	0.98
16	20	4.8e-07	6.6e-05	24.4	1.9	1	23	785	807	785	807	0.98
17	20	0.00038	0.052	15.3	3.5	2	23	814	835	814	835	0.98
18	20	0.003	0.41	12.5	0.7	2	23	843	865	842	865	0.97
19	20	2.6e-05	0.0036	18.9	0.3	1	23	870	892	870	892	0.97
20	20	0.0021	0.29	12.9	1.6	2	23	899	921	898	921	0.96

Sequence Information

Coding Sequence: ATGTCTTCGGATGAGTCTGATGATGAACCGCTATCCGTTATAGCGGCAAATAAGAAATTAGACCCAGAACAATATGAGGAGTTAACATCGGATTCATCAGAGACTCCTAATAAGAAGAAAAAGAAGTTACCACCACCTAAACGGTTCTCGGTCACGATTCAACGTAAGAAGGCTGCCGAGCAACCGCCGGTAATAGAGCGGCCGACAGATGTGTGGCTCTACCTAAAAGATCTGAACCCTTCGGGACCCTACAGCTGCTTACTCTGCACAGACTGGTTCATAAACAGATCAAAAATGATCATACATTACGTCCTAAATCATAAAAAAGACTTCTGTGGTATTTGTAGATACTTCGTACCTGATAGAGAGGCGTGGGGGACACATATGAAGTTCCATACTCCCTGGCCATGCTCACAATGTATTGAGAACTTGGAAACTGAAGCTGATCTCCGGCATCATCTCAAGTCCTGTCACAATCTCGTGCATTGCAGACTCTGTCACTTCCGTGTACTGGATGGTGATCCGTACCACTCACACTTGTTCCAGAAACACAATGTCTCCAATGTGTCAAATAAAGATGAAGATAATCTTTGGGAGTTAGAATATGATGGAACCTCAAACTTCCTATGTTTACTTTGTAATAAATCTACCAACTCTACTAGAACATTTTTCAATCACTACATGGGGTATCACCATTTCACCCTGAAATGCTTTGCTGCCCTATTGTCAGGCAGAGATATATCATTCTCAGTGTATGGTGCAGATCTCCGAGCTGAATTTGTTGAAGAACAACTGAAACACCATGAAAGATTTGGCTATGTTGACTCAGAAAGCGCTATAATAGCTGACTCAGGTGAAACCAGAGATTTACTAAAAGTCCTTATACCAGAAATTAAGCAAGAAGTGGAGACCCCTGATGAAGTCAAGAATGATGATGGAGCTGAAAAGACCAAGGACGATGATGAGGTTGATGTTTACAAATCCTACAATGGTATTGATGATTTCGATGTCACTTTAATGGAGCTTATAGTTGTACAGAAATGTTATCATGATTATATTTCTGACATATTATCAGATGTAGTTGCTAATTCATTTTTTGAGTACTCAGATGTTGATTATGAGAAGCTCACTACAGAAGTAGCAATGGATATAGTTTGCACACTGTGCAGTGTCCGATACAGTACTTTGTCCAATTTTGCCAGTCACATGTTCAAAATGCATTGCATAAAGTCCTTGCCGATATACTCATGTAGAGTGTGTGCGACTACTTTCGAGACACAAGGTGAGCTGGACAATCATACATCAAATGAATTGGGAGAGTTTGAGGATCTGTGGATATGTCAGTTTTGTGATAAGGAGTTTGACGACAGGGAGACTACAAGACGACATCTGACAGAACATTGGGAGCTTGCAGAATATGACAACTGTTTCAGCCCACATTTAGGTTTCAAATGCCGCTATTGTCCCACTCTATTTTGGCATGAGACGGACAGAGAGACTCATCAAGTGCGGGCCCATTTTTTCAGCCATAAAGAAGCTTATTACAAGTGTGAGAGCTGCAATGAAGTTTTTAGTGACAAGGTCTGGTATGTCCACCATCACTTAGAAAAGCACAGCACTCCAGATAATACCTGTCTGTACCTCCTCAAATGTTCCCTGTGCTGCGTGGTGATGCCAAGTATTGAGGAGATGAGAGGGCACTTCAACTGTGAGCACGCTGAAGCTAGGAAGGTGTTCTGTTCCTTAGATGCTTGTCAGTACAAGCCTTTGAGCCACCGCAAGTCTTTCAAGCTACATGTGCGGACTATGCACACTTCTCGTGGTGGGTCACGTCCGGAGCGTTCCGTGGACTGCGTGGTGTGTGGGCGCGAGTTCGGCAGCTCGCGGGCATGCGGCGCTCACATGGCGCAGGCGCATGGGCCCGGCAAGTTTAAGTGCAAGCTATGCAGGGAAGTGCTGCACACTATGGACGAGAGAAAACTCCACTACCTCATAAGTCACCCTGGCCAGCACCCGTTTGAGTGTTCCGAGTGCGGCAAGTCGTTTCAATACAAGTCTTCGCTGTACATGCATAAGCAAGACCATCTGCCCAACAAGCAGAACTATACCTGTACTTACTGTGGGAAAACCTTTTTGAAACGCGACTCCTTCCGGGAACACGTCCAGATCCACGAAGGGCCGCGTCACGCGTGTTCGTACTGCCCGATGCGCTTCGTGCAGCGATCCAACATGTTGCGCCACGAACGTCGCCACACAGGCGAGCGCCCGTACGCCTGCCCGCACTGTCCCCGCAACTTCGCTGATAAAGGAGCCTGTAACTCGCACACCAGAACCCATTTGAAGGAAACATCGTACGCTTGTATGTACTGCGGTAAAACGTTCGTACAGAAGTCTAAGCTCACGTATCACATCAGAAAACATACTGGAGAAAACCTGGAAACATGTACAGTATGCTCAAAATTATTCACAAGCGCGTGCTCGCTGCGAGAACACATGAAGACTCACGAACCTAAGAAGGAGTTGGTTAAATGTCCACTATGTGAACGAAAGTATCAAGACGAGCGCTACATGCTACGTCACCTGCGTACGTCACACACTCACGCGCGACACCCCTGCCCCATCTGCGACAAGTCGCTGACCAGCGCTGCTGGGCTGCGACACCACGTCATCACCCATAGTACACTGAAGACCATCAGGTGCAAAATGTGTCCAAAAGCCTACTCAGTGAAAAGAACAATGATCAAACATTTCCGACGTCGACATGGCTTCAAAGGCACGGAAACAAACATCAAAGAGTTCTACACTAGACTGGACCCTAGAGAGTGCAACCTAGGTCTCGACGAGCCGATAATGACCAGCATATTTGGACCTCCGCCAAAGAAACCGATGGATAGCCTAGTAGCAGATTATGTTACAATAGCTAACATAGAACCACCACGAGTAGAACAAGAAGATAGTCAGAATACAGAAGATACACAAGACACACAGCTTGGGAAGTCTCAGTCGGAAGACGAACAGTCGAGAGAAAGTGACAAGGACGCAGGTAGCACAACGGCAATTGAGATAAAGATTGAACCTGAACCCAATCCAGTGGAGTTGGAACCCACTGACTTTGTAAGCGTTAAAATTGAACCGATGGATGAACATGCTGAGGAGGAATCGTAG
Protein Sequence: MSSDESDDEPLSVIAANKKLDPEQYEELTSDSSETPNKKKKKLPPPKRFSVTIQRKKAAEQPPVIERPTDVWLYLKDLNPSGPYSCLLCTDWFINRSKMIIHYVLNHKKDFCGICRYFVPDREAWGTHMKFHTPWPCSQCIENLETEADLRHHLKSCHNLVHCRLCHFRVLDGDPYHSHLFQKHNVSNVSNKDEDNLWELEYDGTSNFLCLLCNKSTNSTRTFFNHYMGYHHFTLKCFAALLSGRDISFSVYGADLRAEFVEEQLKHHERFGYVDSESAIIADSGETRDLLKVLIPEIKQEVETPDEVKNDDGAEKTKDDDEVDVYKSYNGIDDFDVTLMELIVVQKCYHDYISDILSDVVANSFFEYSDVDYEKLTTEVAMDIVCTLCSVRYSTLSNFASHMFKMHCIKSLPIYSCRVCATTFETQGELDNHTSNELGEFEDLWICQFCDKEFDDRETTRRHLTEHWELAEYDNCFSPHLGFKCRYCPTLFWHETDRETHQVRAHFFSHKEAYYKCESCNEVFSDKVWYVHHHLEKHSTPDNTCLYLLKCSLCCVVMPSIEEMRGHFNCEHAEARKVFCSLDACQYKPLSHRKSFKLHVRTMHTSRGGSRPERSVDCVVCGREFGSSRACGAHMAQAHGPGKFKCKLCREVLHTMDERKLHYLISHPGQHPFECSECGKSFQYKSSLYMHKQDHLPNKQNYTCTYCGKTFLKRDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRNFADKGACNSHTRTHLKETSYACMYCGKTFVQKSKLTYHIRKHTGENLETCTVCSKLFTSACSLREHMKTHEPKKELVKCPLCERKYQDERYMLRHLRTSHTHARHPCPICDKSLTSAAGLRHHVITHSTLKTIRCKMCPKAYSVKRTMIKHFRRRHGFKGTETNIKEFYTRLDPRECNLGLDEPIMTSIFGPPPKKPMDSLVADYVTIANIEPPRVEQEDSQNTEDTQDTQLGKSQSEDEQSRESDKDAGSTTAIEIKIEPEPNPVELEPTDFVSVKIEPMDEHAEEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00758517;
90% Identity: iTF_01118624;
80% Identity: -