Basic Information

Insect: Orthosia incerta
Gene Symbol: -
Assembly: GCA_948252205.1
Location: OX411743.1:11240141-11263361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.6e-05 0.012 17.3 1.5 1 23 432 454 432 454 0.96

2 20 0.0041 0.57 12.0 0.6 1 20 460 479 460 482 0.94

3 20 2.1e-05 0.0029 19.2 5.6 1 23 501 523 501 523 0.98

4 20 9.7e-05 0.013 17.1 4.1 1 23 529 551 529 551 0.99

5 20 3.7e-05 0.0051 18.5 5.3 1 23 557 579 557 579 0.97

6 20 8.4e-06 0.0012 20.5 7.4 1 23 585 607 585 607 0.97

7 20 7.1e-07 9.8e-05 23.9 2.9 1 23 613 635 613 635 0.97

8 20 0.0001 0.014 17.1 6.7 1 23 641 663 641 663 0.97

9 20 0.0001 0.014 17.1 6.5 1 23 669 691 669 691 0.97

10 20 4.8e-07 6.6e-05 24.4 1.9 1 23 697 719 697 719 0.98

11 20 9.6e-06 0.0013 20.3 7.7 1 23 725 747 725 747 0.98

12 20 0.00013 0.018 16.7 6.8 1 23 753 775 753 775 0.97

13 20 2e-06 0.00027 22.5 4.2 1 23 781 803 781 803 0.98

14 20 6.6e-06 0.00091 20.8 5.0 1 23 809 831 809 831 0.96

15 20 2.1e-06 0.00029 22.4 4.9 1 23 837 859 837 859 0.98

16 20 3e-06 0.00042 21.9 6.0 1 23 865 887 865 887 0.98

17 20 5.9e-05 0.0081 17.8 7.9 1 23 893 915 893 915 0.97

18 20 3.2e-05 0.0044 18.7 6.6 1 23 921 943 921 943 0.97

19 20 0.00072 0.099 14.4 0.3 1 23 950 972 950 972 0.96

20 20 0.31 43 6.1 4.9 1 23 983 1005 983 1005 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.6e-05	0.012	17.3	1.5	1	23	432	454	432	454	0.96
2	20	0.0041	0.57	12.0	0.6	1	20	460	479	460	482	0.94
3	20	2.1e-05	0.0029	19.2	5.6	1	23	501	523	501	523	0.98
4	20	9.7e-05	0.013	17.1	4.1	1	23	529	551	529	551	0.99
5	20	3.7e-05	0.0051	18.5	5.3	1	23	557	579	557	579	0.97
6	20	8.4e-06	0.0012	20.5	7.4	1	23	585	607	585	607	0.97
7	20	7.1e-07	9.8e-05	23.9	2.9	1	23	613	635	613	635	0.97
8	20	0.0001	0.014	17.1	6.7	1	23	641	663	641	663	0.97
9	20	0.0001	0.014	17.1	6.5	1	23	669	691	669	691	0.97
10	20	4.8e-07	6.6e-05	24.4	1.9	1	23	697	719	697	719	0.98
11	20	9.6e-06	0.0013	20.3	7.7	1	23	725	747	725	747	0.98
12	20	0.00013	0.018	16.7	6.8	1	23	753	775	753	775	0.97
13	20	2e-06	0.00027	22.5	4.2	1	23	781	803	781	803	0.98
14	20	6.6e-06	0.00091	20.8	5.0	1	23	809	831	809	831	0.96
15	20	2.1e-06	0.00029	22.4	4.9	1	23	837	859	837	859	0.98
16	20	3e-06	0.00042	21.9	6.0	1	23	865	887	865	887	0.98
17	20	5.9e-05	0.0081	17.8	7.9	1	23	893	915	893	915	0.97
18	20	3.2e-05	0.0044	18.7	6.6	1	23	921	943	921	943	0.97
19	20	0.00072	0.099	14.4	0.3	1	23	950	972	950	972	0.96
20	20	0.31	43	6.1	4.9	1	23	983	1005	983	1005	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCATCATAATATGAATACGGGTGGTGGCCAGCCTCCGGGAAGTTCTGAGTCACAGGTTCAAAGAATTCAAGCCACCCAGCAGCAACAACAGAATAACTTACCTGCCACGACATCTGCTACTGATTTGCGAGTGAACTCAGCTGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACAAATTTATTCCCCGGACCTATACCACAAGTGTCTGTGTACGGATTACCTGCCGGAGCTAGGATTGAAAATGGGAAGCCTGTCCAGGACCTTGGGCAAGCTCATGCAAGTATACTGAATGGGGATCCAAATATAATACTGGGGCATCATGCAGGCCAATCTCAAGTTACAGTATCAGCTGCTGGAGGACAGCAGATACCAGTTTCACAGATCATTGCCACGCAGTCGGGACAAACTCATGAAGCTCTCGTGGCCCATAGTCACCAGCAGGCTGAGCTGGCCGCGGTCCAGGCCTCCGTGAACAACGCGCAGGTGTCAGTTAGTGCAGGCCAAGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCACGTGGGACACCATTCCCAACAACACATAATGCAGCAGCAACTGATGGCGCAGGCGCGACCAGAACATAGCAACCAACAGATTCAACTGACGGTAAGCGAGGACGGCATAGTCACGGTAGTGGAACCAGCAGGCACAAAAATGGTTGACAAGGAGGAACTCCATGAGGCCATCAAGATGCCCAACGACCACACGCTCACAGTACACCAGCTGCAGCAGATAGTGGGACAACAGGTCATAGACAGCGTAGTACGCATAGAGCAAGCGACTGGTGAGCCAGCCAACATCTTAGTGACCCACAATCCTGACGGCACAACCTCCATAGAAGCCAGCGCTGCTGACCCTATGATTGTCAAGGACGAGAAGAATGCTAACAAAATAGAGACCGCACAATTTGCTATACCTGCTGAGATAAAGGATATAAAGGGGATTGACCTGAAGAGTGTAGGAGCCATGGGCATGGAAGGTGCAGTCGTGAAGATCTCAGCCGGTGCGTCAGAACACGACCTTCACGCAATGTATAAAGTAAATGTAGAAGATCTGTCACAACTGCTTGCCTACCATGAAGTCTTCGGAAAACTTAACTCGGAAGGCCAGCAGCAGCAACAAGCCAAGGTAATAAGCGAGGTGGAAGTAGAAGTGGAAGCTGGCACCAGCGCAGCTATGGCAGCAGAAGAATCGTCGCCAGGCCACCACGCATGTGATATTTGCGGGAAAATATTCCAGTTCCGATATCAACTCATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCGTTCACATGTCAGGTTTGCGGTTCCGCATTTGCAAATCCTGTCGAATTATCCAGGCATGGGAAGTGCCATCTTGCTGGAGACCCGAACGAACGACACGCCAAGAGGATGGCGCAAGATAAGCCATACGCATGCACGACTTGCCACAAAACGTTCTCCCGTAAAGAACATTTGGACAATCATGTTCGAAGTCACACTGGAGAAACTCCTTACAGGTGCGAATTCTGCGCAAAGACTTTCACCCGCAAAGAGCACATGGTCAACCATGTACGAAAACACACGGGTGAGACTCCGCACCGATGTGATATCTGCAAGAAGAGTTTCACAAGGAAAGAACACTTCATGAACCACGTTATGTGGCATACAGGAGAGACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCTCACCGCTGCGACTTCTGTTCAAAGACATTCACTCGTAAAGAGCATCTCCTGAATCACGTACGTCAGCACACGGGCGAGTCTCCTCACCGCTGCAACTTCTGTAGCAAGTCGTTCACAAGGCGGGAACACCTCGTCAACCACGTGAGACAACACACCGGGGAAACGCCCTTCCAGTGCGGATACTGTCCTAAAGCGTTCACGAGGAAGGACCACCTCGTGAACCACGTCCGCCAGCATACAGGCGAATCCCCGCACAAGTGTTCGTACTGCACAAAATCGTTCACTCGCAAGGAGCACCTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCATCGATGTACTTTCTGCGCCAAGTCCTTCACGAGGAAGGAACACCTTACCAATCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCACCTCAACAACCACATCCGCCAGCACACCGGCGTCACGCCGCACGCCTGCTCCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCATCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCATCTCAATAACCACGTGAACCTTCACACTGGAGCTACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAAGAGCATTTGACCAACCATGTCAGAATTCACACGGGAGAGTCCCCGCACCGCTGCGACTTCTGCCAAAAGACGTTCACTCGCAAGGAGCACTTGACAAACCATCTGAAGCAGCACACCGGCGACACCGCACACGTCTGCAAGGTGTGCTCTAAGCACTTCACCAGGAAAGAGCATCTTGTCACGCACATGAGGGCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCGTTGAAAGGCAACCTACTGTTCCATGAACGATCGCACAACAAGAACAATGCCAATGCAAATAAGCAATACCGGTGTGAAGTCTGCTCTAAAGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGTACACACGCGGCATGGGCGGAAGGTGCCGCGACCGGCGAAACACCCGCTGAAACAGAAGACTGTACTGATAGTAAATGCATCAAAGTTGAGCCAGAACGAATTGAAAGGAAACATGAAATTAGGACGTCAATCGAAACTAGACCGGTTGAGAGCAATGTAGCACAAAGTCAACCAAACACACCTACTGTGATGATAACTAATAATCAACAAGTACGGCCAGCGAACGTAAGCGCAGTGGGAGCGGTAAGCGGGGTGGGCGCGGGCGTGGCGGCCTCGTTCGTGGGCGCGGTGGGTGCGGTGGGCGCAGTGGGCGCGCCGCACCACGCCGGCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQDHHNMNTGGGQPPGSSESQVQRIQATQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSHQQAELAAVQASVNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMVNHVGHHSQQHIMQQQLMAQARPEHSNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPMIVKDEKNANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQQAKVISEVEVEVEAGTSAAMAAEESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVTPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLNNHVNLHTGATPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRAHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKQYRCEVCSKEFLCKGHLVSHRRTHAAWAEGAATGETPAETEDCTDSKCIKVEPERIERKHEIRTSIETRPVESNVAQSQPNTPTVMITNNQQVRPANVSAVGAVSGVGAGVAASFVGAVGAVGAVGAPHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -